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Properties
| Property Name | Value |
|---|
| TranscriptId | 558441 |
| Track | FilteredModels2 |
| ProteinId | 558355 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:607302..608304 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6746 ID=mRNA_6746|Name=jgi.p|Nanoce1779_2|558355|organism=Nannochloropsis oceanica|type=mRNA|length=885bp
ATGCTGGCGCATGCCGGAGTCGCCTCTCGACGAAGCGCAGAGGAAATGAT
TGCTCAAGGGAAGGTCAGCGTGAATGGCGTGATTGTGTTGGACGTGGGTT
GCAAGGTTGATCCATCTGTGGACTCCATAACGGTGGAGGGGAAGGCTGCG
CCGGTAGCGTTGCGGAAGGCGAGTGAGGTGGTGTGGATGAAGGTGAACAA
GCCGAAGGGCACTCTGACGTCAATCACGGACAGCAAAGGCCGTAAATGTC
TGGGGGATCTGGTGGAAAGCGCGGTGGAAAAGCGGCTTTTGCCTGTTGGA
CGGTTGGACAGGGACACTGCGGGATTGTTGTTGATGACGAATGACAACGA
GGCAATCAATCTGTTGACGCACCCGTCCTTTGGCCACGTTAAGTTGTACA
AGGCTGTGGTGGAGAAGGGCATGCCGTCTGTGCATGTTTTGCACCAGCTT
AAGAGGGGCTTGGGGGGAGGGACGGTGACCTTGGAACCGTTGATGGTGGA
GACGGTAGATTATTTCGCGGACCGTAAGGAGGCGGTGTTGGAAGTCTCAG
TGAGGGAGACGAAGAGTGAGGAGATTAGGCGGGCTTTTGAGCAGGTGGGG
CATCCGGTCAAGGGATTGACAAGGGTAGCTTTTGGGTCTATCGTGCTCGG
TGATATGAGGCTGGGGGAGGCGAAGAAATTGTCGATGGTGGAGATGGGAC
GTTTGAGGGGGGCGCTGGCGGCGATGAGGAAGAGGATGAGCCGTCGGAGG
AGAAAGGCGTTGACGGGTTTGGGATCCGAGGGCGAGGAGGAGGGAAGGAG
GGCGAGGAAAAAGAGTAAGGGGGGAGGAGTGATGGGAGCGGGAGGGAAGG
GGGGAATAGCGGGGGAGGAGGGGGGCAGGAAATAG back to topprotein sequence of jgi.p|Nanoce1779_2|558355 >mRNA_6746-protein ID=mRNA_6746-protein|Name=jgi.p|Nanoce1779_2|558355|organism=Nannochloropsis oceanica|type=polypeptide|length=295bp
MLAHAGVASRRSAEEMIAQGKVSVNGVIVLDVGCKVDPSVDSITVEGKAA
PVALRKASEVVWMKVNKPKGTLTSITDSKGRKCLGDLVESAVEKRLLPVG
RLDRDTAGLLLMTNDNEAINLLTHPSFGHVKLYKAVVEKGMPSVHVLHQL
KRGLGGGTVTLEPLMVETVDYFADRKEAVLEVSVRETKSEEIRRAFEQVG
HPVKGLTRVAFGSIVLGDMRLGEAKKLSMVEMGRLRGALAAMRKRMSRRR
RKALTGLGSEGEEEGRRARKKSKGGGVMGAGGKGGIAGEEGGRK* back to topmRNA from alignment at scaffold_18:607302..608304- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6746 ID=mRNA_6746|Name=jgi.p|Nanoce1779_2|558355|organism=Nannochloropsis oceanica|type=mRNA|length=1003bp|location=Sequence derived from alignment at scaffold_18:607302..608304- (Nannochloropsis oceanica)
ATGCTGGCGCATGCCGGAGTCGCCTCTCGACGAAGCGCAGAGGAAATGAT
TGCTCAAGGGAAGGTCAGCGTGAATGGCGTGATTGTGTTGGACGTGGGTT
GCAAGGTTGATCCATCTGTGGACTCCATAACGGTGGAGGGGAAGGCTGCG
CCGGTAGCGTTGCGGAAGGCGAGTGAGGTGGTGTGGATGAAGGTGAACAA
GCCGAAGGGCACTCTGACGTCAATCACGGACAGCAAAGGCCGTAAATGTC
TGGGGGATCTGGTGGAAAGCGCGGTGGAAAAGCGGCTTTTGCCTGTTGGA
CGGTTGGACAGGGACACTGCGGGATTGTTGTTGATGACGAATGACAACGA
GGCAATCAATCTGTTGACGCACCCGTCCTTTGGCCACGTTAAGTTGTACA
AGGCTGTGGTGGAGAAGGGCATGCCGTCTGTGCATGTTTTGCACCAGCTT
AAGAGGGGCTTGGTGCTCTTGGAGGAGGAGAACGGGGGTAAAGAGGAGCT
GGAGGGGGGGGTAAGGGGAAAGAGGAAGGGGGGGGGAGTATGATGAGAGG
GGGCGGCGGAGGGTGGTGCCGCGAGGGAAGGGGGGAGGGACGGTGACCTT
GGAACCGTTGATGGTGGAGACGGTAGATTATTTCGCGGACCGTAAGGAGG
CGGTGTTGGAAGTCTCAGTGAGGGAGACGAAGAGTGAGGAGATTAGGCGG
GCTTTTGAGCAGGTGGGGCATCCGGTCAAGGGATTGACAAGGGTAGCTTT
TGGGTCTATCGTGCTCGGTGATATGAGGCTGGGGGAGGCGAAGAAATTGT
CGATGGTGGAGATGGGACGTTTGAGGGGGGCGCTGGCGGCGATGAGGAAG
AGGATGAGCCGTCGGAGGAGAAAGGCGTTGACGGGTTTGGGATCCGAGGG
CGAGGAGGAGGGAAGGAGGGCGAGGAAAAAGAGTAAGGGGGGAGGAGTGA
TGGGAGCGGGAGGGAAGGGGGGAATAGCGGGGGAGGAGGGGGGCAGGAAA
TAG back to topCoding sequence (CDS) from alignment at scaffold_18:607302..608304- >mRNA_6746 ID=mRNA_6746|Name=jgi.p|Nanoce1779_2|558355|organism=Nannochloropsis oceanica|type=CDS|length=1770bp|location=Sequence derived from alignment at scaffold_18:607302..608304- (Nannochloropsis oceanica)
GGGGGAGGGACGGTGACCTTGGAACCGTTGATGGTGGAGACGGTAGATTA
TTTCGCGGACCGTAAGGAGGCGGTGTTGGAAGTCTCAGTGAGGGAGACGA
AGAGTGAGGAGATTAGGCGGGCTTTTGAGCAGGTGGGGCATCCGGTCAAG
GGATTGACAAGGGTAGCTTTTGGGTCTATCGTGCTCGGTGATATGAGGCT
GGGGGAGGCGAAGAAATTGTCGATGGTGGAGATGGGACGTTTGAGGGGGG
CGCTGGCGGCGATGAGGAAGAGGATGAGCCGTCGGAGGAGAAAGGCGTTG
ACGGGTTTGGGATCCGAGGGCGAGGAGGAGGGAAGGAGGGCGAGGAAAAA
GAGTAAGGGGGGAGGAGTGATGGGAGCGGGAGGGAAGGGGGGAATAGCGG
GGGAGGAGGGGGGCAGGAAATAGATGCTGGCGCATGCCGGAGTCGCCTCT
CGACGAAGCGCAGAGGAAATGATTGCTCAAGGGAAGGTCAGCGTGAATGG
CGTGATTGTGTTGGACGTGGGTTGCAAGGTTGATCCATCTGTGGACTCCA
TAACGGTGGAGGGGAAGGCTGCGCCGGTAGCGTTGCGGAAGGCGAGTGAG
GTGGTGTGGATGAAGGTGAACAAGCCGAAGGGCACTCTGACGTCAATCAC
GGACAGCAAAGGCCGTAAATGTCTGGGGGATCTGGTGGAAAGCGCGGTGG
AAAAGCGGCTTTTGCCTGTTGGACGGTTGGACAGGGACACTGCGGGATTG
TTGTTGATGACGAATGACAACGAGGCAATCAATCTGTTGACGCACCCGTC
CTTTGGCCACGTTAAGTTGTACAAGGCTGTGGTGGAGAAGGGCATGCCGT
CTGTGCATGTTTTGCACCAGCTTAAGAGGGGCTTGGGGGGAGGGACGGTG
ACCTTGGAACCGTTGATGGTGGAGACGGTAGATTATTTCGCGGACCGTAA
GGAGGCGGTGTTGGAAGTCTCAGTGAGGGAGACGAAGAGTGAGGAGATTA
GGCGGGCTTTTGAGCAGGTGGGGCATCCGGTCAAGGGATTGACAAGGGTA
GCTTTTGGGTCTATCGTGCTCGGTGATATGAGGCTGGGGGAGGCGAAGAA
ATTGTCGATGGTGGAGATGGGACGTTTGAGGGGGGCGCTGGCGGCGATGA
GGAAGAGGATGAGCCGTCGGAGGAGAAAGGCGTTGACGGGTTTGGGATCC
GAGGGCGAGGAGGAGGGAAGGAGGGCGAGGAAAAAGAGTAAGGGGGGAGG
AGTGATGGGAGCGGGAGGGAAGGGGGGAATAGCGGGGGAGGAGGGGGGCA
GGAAATAGATGCTGGCGCATGCCGGAGTCGCCTCTCGACGAAGCGCAGAG
GAAATGATTGCTCAAGGGAAGGTCAGCGTGAATGGCGTGATTGTGTTGGA
CGTGGGTTGCAAGGTTGATCCATCTGTGGACTCCATAACGGTGGAGGGGA
AGGCTGCGCCGGTAGCGTTGCGGAAGGCGAGTGAGGTGGTGTGGATGAAG
GTGAACAAGCCGAAGGGCACTCTGACGTCAATCACGGACAGCAAAGGCCG
TAAATGTCTGGGGGATCTGGTGGAAAGCGCGGTGGAAAAGCGGCTTTTGC
CTGTTGGACGGTTGGACAGGGACACTGCGGGATTGTTGTTGATGACGAAT
GACAACGAGGCAATCAATCTGTTGACGCACCCGTCCTTTGGCCACGTTAA
GTTGTACAAGGCTGTGGTGGAGAAGGGCATGCCGTCTGTGCATGTTTTGC
ACCAGCTTAAGAGGGGCTTG back to top
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