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Properties
| Property Name | Value |
|---|
| TranscriptId | 558436 |
| Track | FilteredModels2 |
| ProteinId | 558350 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:605975..607042 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6745 ID=mRNA_6745|Name=jgi.p|Nanoce1779_2|558350|organism=Nannochloropsis oceanica|type=mRNA|length=918bp
CAGTCATTCTCAATACAGTCCATCAACATCATGCATCGTGCCCGGTTGAC
CGAGAGTCGCCGCGCCTTGTCCTCCTCTTCCACCTCTTCCTCCATCAGCG
AGAGACCACTGCCTTTGCCGCCTTTGCCGCCTCGCACCCAACGGCAATAC
CATCACGTGCGCAGCAAAATTAATTCGGGCCCAACAATAAACAAGGTCAA
GGTGGTGACTTTCGCGCAGTATGTGCGTCGACGGCAAGAGACGTTTTGTC
GGGTCAATCCCGGACAGCTCCGAGCTCTACTGCTTGAATACGACGATGAA
ATGAGAACACAAGACGCACTGGAGGAGGCAGAGGGCTGCGGCCCACTGGT
AGTGACGCACGGGAGCCTGGATGATGCTGTGTATGAGAAGCCTTTTTTGT
TGCTCGATGTCCGCGACGAGGGCGAGAGCACACCCACTCTTGGGGTCATT
ACCCACACCCGTCCGTTTCCCCACGCGCATTTGCACCAGGACAAGTACTT
TCCAGAGCTGCGCCGCTACAAGAATCTGGAAAGGACATTGGTTATTTTGT
ACGATGACGATGAGCGTGCAGGACTTGCGGCGTCGATGGCCACGCAGCTT
GTGGAAAGGGGATGGGAGAACGTATTCGTGTTGACGGGCGGGTTTACGGC
CTTTGCCGAGGTCTGTCCGAAGTATGTGGAGGGAGGGAGGGCGCAGCAGC
AGGAAATGGAGGTTAGGAAAGCGGAACATGAAGAAGTGGGCAGGCATCGA
CAAGGAAATTCCGAGACGTGCTCGATTTTATCCTTGTCGTCGTGGCGAGG
GAGGAAGAAGGGGAGTGTGAGCGCCCAGAGCTTGGCACCAACGACCACTA
CCCTCAGCACTGCCTCCGTCGCCGAGTCGGTCATCGAGCGGGCTCGGGCC
AAGAAGGGACGCTTTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|558350 >mRNA_6745-protein ID=mRNA_6745-protein|Name=jgi.p|Nanoce1779_2|558350|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp
MHRARLTESRRALSSSSTSSSISERPLPLPPLPPRTQRQYHHVRSKINSG
PTINKVKVVTFAQYVRRRQETFCRVNPGQLRALLLEYDDEMRTQDALEEA
EGCGPLVVTHGSLDDAVYEKPFLLLDVRDEGESTPTLGVITHTRPFPHAH
LHQDKYFPELRRYKNLERTLVILYDDDERAGLAASMATQLVERGWENVFV
LTGGFTAFAEVCPKYVEGGRAQQQEMEVRKAEHEEVGRHRQGNSETCSIL
SLSSWRGRKKGSVSAQSLAPTTTTLSTASVAESVIERARAKKGRF* back to topmRNA from alignment at scaffold_18:605975..607042+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6745 ID=mRNA_6745|Name=jgi.p|Nanoce1779_2|558350|organism=Nannochloropsis oceanica|type=mRNA|length=1068bp|location=Sequence derived from alignment at scaffold_18:605975..607042+ (Nannochloropsis oceanica)
CAGTCATTCTCAATACAGTCCATCAACATCATGCATCGTGCCCGGTTGAC
CGAGAGTCGCCGCGCCTTGTCCTCCTCTTCCACCTCTTCCTCCATCAGCG
AGAGACCACTGCCTTTGCCGCCTTTGCCGCCTCGCACCCAACGGCAATAC
CATCACGTGCGCAGCAAAATTAATTCGGGCCCAACAATAAACAAGGTCAA
GGTGGTGACTTTCGCGCAGTATGTGCGTCGACGGCAAGAGACGTTTTGTC
GGGTCAATCCCGGACAGCTCCGAGCTCTACTGCTTGAATACGACGATGAA
ATGAGAACACAAGACGCACTGGAGGAGGCAGAGGGCTGCGGCCCACTGGT
AGTGACGCACGGGAGCCTGGATGATGCTGTGTATGAGAAGCCTTTTTTGT
TGCTCGATGTCCGCGACGAGGGCGAGAGCACACCCACTCTTGGGGTCATT
ACCCACACCCGTCCGTTTCCCCACGCGCATTTGCACCAGGACAAGTACTT
TCCAGAGCTGCGCCGCTACAAGAATCTGGAAAGGACATTGGTTATTTTGT
ACGATGACGATGAGCGTGCAGGACTTGCGGCGTCGATGGCCACGCAGCTT
GTGGAAAGGGGATGGGAGAACGTATTCGTGTTGACGGGCGGGTTTACGGC
CTTTGCCGAGGTCTGTCCGAAGTATGTGGAGGGAGGGAGGGCGCAGCAGC
AGGAAATGGAGGTTAGGAAAGCGGAACATGAAGAAGTGGGTTCGCATGTG
TCGCGCCTTTCGGCGCTCACGCTGGGCAAGCTTCCAGGTGGAGCCATCAC
CAGCATCAGCAATACTAGCACCATCAGCACTAGCACCAGCACCAGCGGAC
GAGGACGAGACTACAGGCCAAAGGGCAGTGTTTATAGAGGCAGGCATCGA
CAAGGAAATTCCGAGACGTGCTCGATTTTATCCTTGTCGTCGTGGCGAGG
GAGGAAGAAGGGGAGTGTGAGCGCCCAGAGCTTGGCACCAACGACCACTA
CCCTCAGCACTGCCTCCGTCGCCGAGTCGGTCATCGAGCGGGCTCGGGCC
AAGAAGGGACGCTTTTGA back to topCoding sequence (CDS) from alignment at scaffold_18:605975..607042+ >mRNA_6745 ID=mRNA_6745|Name=jgi.p|Nanoce1779_2|558350|organism=Nannochloropsis oceanica|type=CDS|length=1776bp|location=Sequence derived from alignment at scaffold_18:605975..607042+ (Nannochloropsis oceanica)
ATGCATCGTGCCCGGTTGACCGAGAGTCGCCGCGCCTTGTCCTCCTCTTC
CACCTCTTCCTCCATCAGCGAGAGACCACTGCCTTTGCCGCCTTTGCCGC
CTCGCACCCAACGGCAATACCATCACGTGCGCAGCAAAATTAATTCGGGC
CCAACAATAAACAAGGTCAAGGTGGTGACTTTCGCGCAGTATGTGCGTCG
ACGGCAAGAGACGTTTTGTCGGGTCAATCCCGGACAGCTCCGAGCTCTAC
TGCTTGAATACGACGATGAAATGAGAACACAAGACGCACTGGAGGAGGCA
GAGGGCTGCGGCCCACTGGTAGTGACGCACGGGAGCCTGGATGATGCTGT
GTATGAGAAGCCTTTTTTGTTGCTCGATGTCCGCGACGAGGGCGAGAGCA
CACCCACTCTTGGGGTCATTACCCACACCCGTCCGTTTCCCCACGCGCAT
TTGCACCAGGACAAGTACTTTCCAGAGCTGCGCCGCTACAAGAATCTGGA
AAGGACATTGGTTATTTTGTACGATGACGATGAGCGTGCAGGACTTGCGG
CGTCGATGGCCACGCAGCTTGTGGAAAGGGGATGGGAGAACGTATTCGTG
TTGACGGGCGGGTTTACGGCCTTTGCCGAGGTCTGTCCGAAGTATGTGGA
GGGAGGGAGGGCGCAGCAGCAGGAAATGGAGGTTAGGAAAGCGGAACATG
AAGAAGTGGGCAGGCATCGACAAGGAAATTCCGAGACGTGCTCGATTTTA
TCCTTGTCGTCGTGGCGAGGGAGGAAGAAGGGGAGTGTGAGCGCCCAGAG
CTTGGCACCAACGACCACTACCCTCAGCACTGCCTCCGTCGCCGAGTCGG
TCATCGAGCGGGCTCGGGCCAAGAAGGGACGCTTTTGAATGCATCGTGCC
CGGTTGACCGAGAGTCGCCGCGCCTTGTCCTCCTCTTCCACCTCTTCCTC
CATCAGCGAGAGACCACTGCCTTTGCCGCCTTTGCCGCCTCGCACCCAAC
GGCAATACCATCACGTGCGCAGCAAAATTAATTCGGGCCCAACAATAAAC
AAGGTCAAGGTGGTGACTTTCGCGCAGTATGTGCGTCGACGGCAAGAGAC
GTTTTGTCGGGTCAATCCCGGACAGCTCCGAGCTCTACTGCTTGAATACG
ACGATGAAATGAGAACACAAGACGCACTGGAGGAGGCAGAGGGCTGCGGC
CCACTGGTAGTGACGCACGGGAGCCTGGATGATGCTGTGTATGAGAAGCC
TTTTTTGTTGCTCGATGTCCGCGACGAGGGCGAGAGCACACCCACTCTTG
GGGTCATTACCCACACCCGTCCGTTTCCCCACGCGCATTTGCACCAGGAC
AAGTACTTTCCAGAGCTGCGCCGCTACAAGAATCTGGAAAGGACATTGGT
TATTTTGTACGATGACGATGAGCGTGCAGGACTTGCGGCGTCGATGGCCA
CGCAGCTTGTGGAAAGGGGATGGGAGAACGTATTCGTGTTGACGGGCGGG
TTTACGGCCTTTGCCGAGGTCTGTCCGAAGTATGTGGAGGGAGGGAGGGC
GCAGCAGCAGGAAATGGAGGTTAGGAAAGCGGAACATGAAGAAGTGGGCA
GGCATCGACAAGGAAATTCCGAGACGTGCTCGATTTTATCCTTGTCGTCG
TGGCGAGGGAGGAAGAAGGGGAGTGTGAGCGCCCAGAGCTTGGCACCAAC
GACCACTACCCTCAGCACTGCCTCCGTCGCCGAGTCGGTCATCGAGCGGG
CTCGGGCCAAGAAGGGACGCTTTTGA back to top
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