Properties
Property Name | Value |
TranscriptId | 651905 |
Track | FilteredModels2 |
ProteinId | 651819 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_18 | supercontig | scaffold_18:600063..603432 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6743 ID=mRNA_6743|Name=jgi.p|Nanoce1779_2|651819|organism=Nannochloropsis oceanica|type=mRNA|length=3370bp ATGGAGGACGGCCCCCACCCTCCCTTTCACCTTCCTCCAATACCACTTCC CTCACCGTCCTCCGGCCTTCCTTTCCTCATGAACCACACCTATCCTGTGC CTGACTTATCTGATATGGTTATGGATGACATTTGGATGATGCAAGATCAA GAGCAGCGGCAGCATCACCACCATCAGCAGCATGCCCCTAACCCCCCTCC GAGCCCTGCAGCTGCCATAGGGGAAATTGGGGCTGGCGGTGGTGGCTTTG ACACTTTTATGCTCGACCCCATGACGGGTCATTTTCAAATGCAGCAACAG CTTCCGTCCTTGTCCCCGCTACCCTTGCCGTCTCACCACTACAGACATAC CCGCAGTCAGCAAGACCTCCACCCTACCCGCCACCACAAGGGCCAGAGTG ACAACGATGACGATGAGGAGGAAGAGGAAGAATTTTACGCCAGTGACAGC GACTTTGTGATTGATGAGGATGATCTCTCAAGCCTGGATGAAGATCGGAG CAATCATCAGGTGCGCACTCCCTACCTCCCCCCTTCAATCATGAACGGCA TGGGCTCCCCTGACGGCATGAGCACCCACTCATCCTACCCGGATGGATCT GTCCCCCATTGGGCTGCGGGCGATGGAACTGGCGGCGGATCAGGCCGAAG CCATGGGCGTGGGGGTGCTCGTGGTAATGGCGGGCGTGGGCGACGTAAGG GCTCCCTGGACGTGCAGCAGATGACGCGACGCTTGAAGCAGAAGGCGGAG AGCTATGAGCGGAAGAAGAGTAGAGCCAAGGCCTGTCGCAAGGTGCTGAA GGAGCGGTTCGACACGCTGCTCAAGGTATGCGGTGATCCCCACATTCGAC GCTCGGACAAGGTCGGACTCTTGACGCGGGCGATTAATCTCATTACGACC ATGCGGCAGCAGCTGGGCGGCGCTGGAGGAGCCTTTTTCGACGTGCAACG GGCCCCAACGGCGTGGCGAGGCGGTGGGAACGGCCACCATTATCATCACC ACAGTCAGGGCACACGACGTAGCAAGCGCACAATACGGGGCTCGGCGCTG TCGGCGGCATCGACGAACAACGACGACAACAAAGAACGCGACGACAACGA TGACGAAAACGGAGAGCGCCAACCGGGGAAGCGAGGATGTGTGAACCGTG TGCACTCTCGAAAATCTCCGACTCGATGGATTCCTGTCAGTATGATCCAG CACCAACAAAACTCCGATCCCACGACTCCGTCGCCTCAGACCTTCACCCC TCCTTCGACGCCGACGACCTCCTTTCCAGCTAACTTGCCCTTGAAGGAAC GCCTGGCCACACCCAAAGTGACGCACACGCTGCTGGCGTGCTTGGATTCT GCTTTCCTCGAGCCCTGCCGAGATGTGGTACCCGATAAAAAAGAGCCAAC GGCCTTGCAGGACGTGCCCTGGAAAGAAATATGCCGCATGCGCTGGAAGG CGGAGGAAGCCGAATTCCACGAGGAGCTACACCCCACGACCACGATTGAC TGGCGCCACGTGTATGTGCAGCAAGCCCGGGCCTTGCGGCTACCTCACTC CCCAAACTTTTTGTCCATAGGCTCAGTAGTTTCGTCGGGGGAATCCGGGG GCGTCTGCGGCTGGCTGCTGGCGCGCACCTCTTCCTACATCCCTTTGCCC TCACCTGTGGGCAGCTCGAGTGCGCCGCAGGCCTTGCTCTCCTTTATCCT GGTGATGCAAAATATCACGCACGACATGATCACTATCCCACACCAGCGTT TTGAGGTGCATATCAAGAGACAGGTCCCGTCACAGCAGCAGAAGCAGAAG CAAGGCCCGCGTGTCATTCCCACTCGCTCCATCTCCAACAGTTCCTCCAC TACCACCTCCTCCATCGGCAGCACCAGCGACGGAGATGGCGAGGGGGAAG AGCAGAAAGAACAGGCGAATATGCCGGTGATACTACAAGAGCCAACAGAA ATGCAGCTAAAGGAGCAAGGGTTAGACCCCTCCCTGTATCAGGCTTCCCT CATGTCATGCCAAGAGACGGATTTGAACGCGGACGGCAGCATTCCCTGGG TGTGCTACGAGGGAGTTGGTGGCTTGCGGCTGGGTCTGTTTGATACGGCC GTGCTTACTTTTTACGTTTTATTGCGCAGAGACCTTGGCATGCGTTCAGA CATGGGTGCAGAAAATGGGAAAGAGAAGGCGAAGGGGAAAGGGGAGGGGA TGAGTGCCGAGGAGGCGGAGACCTGGACGAAGGAGATGGCGTTCACGGCA TTAGTGCCGTCCAAGGTGCCGGCGGTGGCGGTTTCAGATGTCTGCAACAA GGAGGAGAAGGGCGACGATACGACGGAGGGAGGTGGGGTTTTGGATAGCG ATGAGGATGGAGACGGGTTAGGTAAAGAGGTGCGAGTGACGTTAGTGACG ACGACAAAGACTGAACAAGGGCCCTAAATGGTGGAATGGCCAAATGTCTC GATAGCAAACAAGAGACTGAAAAAGGGTAGGAGAATGTGATATATCGTAT TAATGACCCACGCAAACACATTCGCGTAATTGATAGAAAGGGGGGGGTGA TGAAGAGCGCGTCGGGAAGAGAAAGAGAAGCTGCTGTGGTAGACGAAGAT GCACAAATAGATGTTGTGTAATTCACCATTCGTTTGGCTTGTCTATAAAA TTGGTGATGCGAGTGATACTTTCATGTGATTATGTCTAAATTTATGGGAT GAAGAAAGATGTTGGCAGGGCTGTCAGAATTTAGGCCTACAAAAGGATAA AGCACGAGCGAAAGTGACAACGAGAAATGGCAACATGTCAGCACGAGATG ACATAAATAACTGTCATATCACAAGGTGATGGTATTTTCCCCCCCTCATC CTCGCCTCACATCTTTTCTCCTTCCTTGTTCCCTCCCTCTAGCTGCACCT ATCTCCTCGCTTTCAACAAAGCAGGGGACACGCTCGTGGTGGGGTAGACT CACAATCACGTAGACATAGAGAAACACATAATAATATCATAAGTAGCAGA AAACAAAGCAGGCTCAAAATCGAGTCGCATCCATCTTCACGATCTTGTCA TTGTGTGGTGTACGTCAATTCTGTCCAGGGAGCCAGAGAGGATCCAGGTC CCTCTCCCCTCCTTGCCCGTCATGCCCCGCCACGCACACATAAGACCCAC CGATATATCGACCCCAAGCTCCCATCCCTGCCCCGTCCTCCGTACACACA AAGACGCGCTCCAAGGGAAGTAGGTATCTTCACCAACGACTCATCTTCGA GGGAAGGAAAAAGTGAGGAATGAAAGGAGGGGCAAATTTGCCACAATCGT GTTAATCAATTCACACGTGGACGATACCCCCTCCTCCCCCCCTACCATCT ACCCTCCCTCCCTCCCTCCC back to topprotein sequence of jgi.p|Nanoce1779_2|651819 >mRNA_6743-protein ID=mRNA_6743-protein|Name=jgi.p|Nanoce1779_2|651819|organism=Nannochloropsis oceanica|type=polypeptide|length=809bp MEDGPHPPFHLPPIPLPSPSSGLPFLMNHTYPVPDLSDMVMDDIWMMQDQ EQRQHHHHQQHAPNPPPSPAAAIGEIGAGGGGFDTFMLDPMTGHFQMQQQ LPSLSPLPLPSHHYRHTRSQQDLHPTRHHKGQSDNDDDEEEEEEFYASDS DFVIDEDDLSSLDEDRSNHQVRTPYLPPSIMNGMGSPDGMSTHSSYPDGS VPHWAAGDGTGGGSGRSHGRGGARGNGGRGRRKGSLDVQQMTRRLKQKAE SYERKKSRAKACRKVLKERFDTLLKVCGDPHIRRSDKVGLLTRAINLITT MRQQLGGAGGAFFDVQRAPTAWRGGGNGHHYHHHSQGTRRSKRTIRGSAL SAASTNNDDNKERDDNDDENGERQPGKRGCVNRVHSRKSPTRWIPVSMIQ HQQNSDPTTPSPQTFTPPSTPTTSFPANLPLKERLATPKVTHTLLACLDS AFLEPCRDVVPDKKEPTALQDVPWKEICRMRWKAEEAEFHEELHPTTTID WRHVYVQQARALRLPHSPNFLSIGSVVSSGESGGVCGWLLARTSSYIPLP SPVGSSSAPQALLSFILVMQNITHDMITIPHQRFEVHIKRQVPSQQQKQK QGPRVIPTRSISNSSSTTTSSIGSTSDGDGEGEEQKEQANMPVILQEPTE MQLKEQGLDPSLYQASLMSCQETDLNADGSIPWVCYEGVGGLRLGLFDTA VLTFYVLLRRDLGMRSDMGAENGKEKAKGKGEGMSAEEAETWTKEMAFTA LVPSKVPAVAVSDVCNKEEKGDDTTEGGGVLDSDEDGDGLGKEVRVTLVT TTKTEQGP* back to topmRNA from alignment at scaffold_18:600063..603432+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6743 ID=mRNA_6743|Name=jgi.p|Nanoce1779_2|651819|organism=Nannochloropsis oceanica|type=mRNA|length=3370bp|location=Sequence derived from alignment at scaffold_18:600063..603432+ (Nannochloropsis oceanica) ATGGAGGACGGCCCCCACCCTCCCTTTCACCTTCCTCCAATACCACTTCC
CTCACCGTCCTCCGGCCTTCCTTTCCTCATGAACCACACCTATCCTGTGC
CTGACTTATCTGATATGGTTATGGATGACATTTGGATGATGCAAGATCAA
GAGCAGCGGCAGCATCACCACCATCAGCAGCATGCCCCTAACCCCCCTCC
GAGCCCTGCAGCTGCCATAGGGGAAATTGGGGCTGGCGGTGGTGGCTTTG
ACACTTTTATGCTCGACCCCATGACGGGTCATTTTCAAATGCAGCAACAG
CTTCCGTCCTTGTCCCCGCTACCCTTGCCGTCTCACCACTACAGACATAC
CCGCAGTCAGCAAGACCTCCACCCTACCCGCCACCACAAGGGCCAGAGTG
ACAACGATGACGATGAGGAGGAAGAGGAAGAATTTTACGCCAGTGACAGC
GACTTTGTGATTGATGAGGATGATCTCTCAAGCCTGGATGAAGATCGGAG
CAATCATCAGGTGCGCACTCCCTACCTCCCCCCTTCAATCATGAACGGCA
TGGGCTCCCCTGACGGCATGAGCACCCACTCATCCTACCCGGATGGATCT
GTCCCCCATTGGGCTGCGGGCGATGGAACTGGCGGCGGATCAGGCCGAAG
CCATGGGCGTGGGGGTGCTCGTGGTAATGGCGGGCGTGGGCGACGTAAGG
GCTCCCTGGACGTGCAGCAGATGACGCGACGCTTGAAGCAGAAGGCGGAG
AGCTATGAGCGGAAGAAGAGTAGAGCCAAGGCCTGTCGCAAGGTGCTGAA
GGAGCGGTTCGACACGCTGCTCAAGGTATGCGGTGATCCCCACATTCGAC
GCTCGGACAAGGTCGGACTCTTGACGCGGGCGATTAATCTCATTACGACC
ATGCGGCAGCAGCTGGGCGGCGCTGGAGGAGCCTTTTTCGACGTGCAACG
GGCCCCAACGGCGTGGCGAGGCGGTGGGAACGGCCACCATTATCATCACC
ACAGTCAGGGCACACGACGTAGCAAGCGCACAATACGGGGCTCGGCGCTG
TCGGCGGCATCGACGAACAACGACGACAACAAAGAACGCGACGACAACGA
TGACGAAAACGGAGAGCGCCAACCGGGGAAGCGAGGATGTGTGAACCGTG
TGCACTCTCGAAAATCTCCGACTCGATGGATTCCTGTCAGTATGATCCAG
CACCAACAAAACTCCGATCCCACGACTCCGTCGCCTCAGACCTTCACCCC
TCCTTCGACGCCGACGACCTCCTTTCCAGCTAACTTGCCCTTGAAGGAAC
GCCTGGCCACACCCAAAGTGACGCACACGCTGCTGGCGTGCTTGGATTCT
GCTTTCCTCGAGCCCTGCCGAGATGTGGTACCCGATAAAAAAGAGCCAAC
GGCCTTGCAGGACGTGCCCTGGAAAGAAATATGCCGCATGCGCTGGAAGG
CGGAGGAAGCCGAATTCCACGAGGAGCTACACCCCACGACCACGATTGAC
TGGCGCCACGTGTATGTGCAGCAAGCCCGGGCCTTGCGGCTACCTCACTC
CCCAAACTTTTTGTCCATAGGCTCAGTAGTTTCGTCGGGGGAATCCGGGG
GCGTCTGCGGCTGGCTGCTGGCGCGCACCTCTTCCTACATCCCTTTGCCC
TCACCTGTGGGCAGCTCGAGTGCGCCGCAGGCCTTGCTCTCCTTTATCCT
GGTGATGCAAAATATCACGCACGACATGATCACTATCCCACACCAGCGTT
TTGAGGTGCATATCAAGAGACAGGTCCCGTCACAGCAGCAGAAGCAGAAG
CAAGGCCCGCGTGTCATTCCCACTCGCTCCATCTCCAACAGTTCCTCCAC
TACCACCTCCTCCATCGGCAGCACCAGCGACGGAGATGGCGAGGGGGAAG
AGCAGAAAGAACAGGCGAATATGCCGGTGATACTACAAGAGCCAACAGAA
ATGCAGCTAAAGGAGCAAGGGTTAGACCCCTCCCTGTATCAGGCTTCCCT
CATGTCATGCCAAGAGACGGATTTGAACGCGGACGGCAGCATTCCCTGGG
TGTGCTACGAGGGAGTTGGTGGCTTGCGGCTGGGTCTGTTTGATACGGCC
GTGCTTACTTTTTACGTTTTATTGCGCAGAGACCTTGGCATGCGTTCAGA
CATGGGTGCAGAAAATGGGAAAGAGAAGGCGAAGGGGAAAGGGGAGGGGA
TGAGTGCCGAGGAGGCGGAGACCTGGACGAAGGAGATGGCGTTCACGGCA
TTAGTGCCGTCCAAGGTGCCGGCGGTGGCGGTTTCAGATGTCTGCAACAA
GGAGGAGAAGGGCGACGATACGACGGAGGGAGGTGGGGTTTTGGATAGCG
ATGAGGATGGAGACGGGTTAGGTAAAGAGGTGCGAGTGACGTTAGTGACG
ACGACAAAGACTGAACAAGGGCCCTAAATGGTGGAATGGCCAAATGTCTC
GATAGCAAACAAGAGACTGAAAAAGGGTAGGAGAATGTGATATATCGTAT
TAATGACCCACGCAAACACATTCGCGTAATTGATAGAAAGGGGGGGGTGA
TGAAGAGCGCGTCGGGAAGAGAAAGAGAAGCTGCTGTGGTAGACGAAGAT
GCACAAATAGATGTTGTGTAATTCACCATTCGTTTGGCTTGTCTATAAAA
TTGGTGATGCGAGTGATACTTTCATGTGATTATGTCTAAATTTATGGGAT
GAAGAAAGATGTTGGCAGGGCTGTCAGAATTTAGGCCTACAAAAGGATAA
AGCACGAGCGAAAGTGACAACGAGAAATGGCAACATGTCAGCACGAGATG
ACATAAATAACTGTCATATCACAAGGTGATGGTATTTTCCCCCCCTCATC
CTCGCCTCACATCTTTTCTCCTTCCTTGTTCCCTCCCTCTAGCTGCACCT
ATCTCCTCGCTTTCAACAAAGCAGGGGACACGCTCGTGGTGGGGTAGACT
CACAATCACGTAGACATAGAGAAACACATAATAATATCATAAGTAGCAGA
AAACAAAGCAGGCTCAAAATCGAGTCGCATCCATCTTCACGATCTTGTCA
TTGTGTGGTGTACGTCAATTCTGTCCAGGGAGCCAGAGAGGATCCAGGTC
CCTCTCCCCTCCTTGCCCGTCATGCCCCGCCACGCACACATAAGACCCAC
CGATATATCGACCCCAAGCTCCCATCCCTGCCCCGTCCTCCGTACACACA
AAGACGCGCTCCAAGGGAAGTAGGTATCTTCACCAACGACTCATCTTCGA
GGGAAGGAAAAAGTGAGGAATGAAAGGAGGGGCAAATTTGCCACAATCGT
GTTAATCAATTCACACGTGGACGATACCCCCTCCTCCCCCCCTACCATCT
ACCCTCCCTCCCTCCCTCCC back to topCoding sequence (CDS) from alignment at scaffold_18:600063..603432+ >mRNA_6743 ID=mRNA_6743|Name=jgi.p|Nanoce1779_2|651819|organism=Nannochloropsis oceanica|type=CDS|length=2427bp|location=Sequence derived from alignment at scaffold_18:600063..603432+ (Nannochloropsis oceanica) ATGGAGGACGGCCCCCACCCTCCCTTTCACCTTCCTCCAATACCACTTCC CTCACCGTCCTCCGGCCTTCCTTTCCTCATGAACCACACCTATCCTGTGC CTGACTTATCTGATATGGTTATGGATGACATTTGGATGATGCAAGATCAA GAGCAGCGGCAGCATCACCACCATCAGCAGCATGCCCCTAACCCCCCTCC GAGCCCTGCAGCTGCCATAGGGGAAATTGGGGCTGGCGGTGGTGGCTTTG ACACTTTTATGCTCGACCCCATGACGGGTCATTTTCAAATGCAGCAACAG CTTCCGTCCTTGTCCCCGCTACCCTTGCCGTCTCACCACTACAGACATAC CCGCAGTCAGCAAGACCTCCACCCTACCCGCCACCACAAGGGCCAGAGTG ACAACGATGACGATGAGGAGGAAGAGGAAGAATTTTACGCCAGTGACAGC GACTTTGTGATTGATGAGGATGATCTCTCAAGCCTGGATGAAGATCGGAG CAATCATCAGGTGCGCACTCCCTACCTCCCCCCTTCAATCATGAACGGCA TGGGCTCCCCTGACGGCATGAGCACCCACTCATCCTACCCGGATGGATCT GTCCCCCATTGGGCTGCGGGCGATGGAACTGGCGGCGGATCAGGCCGAAG CCATGGGCGTGGGGGTGCTCGTGGTAATGGCGGGCGTGGGCGACGTAAGG GCTCCCTGGACGTGCAGCAGATGACGCGACGCTTGAAGCAGAAGGCGGAG AGCTATGAGCGGAAGAAGAGTAGAGCCAAGGCCTGTCGCAAGGTGCTGAA GGAGCGGTTCGACACGCTGCTCAAGGTATGCGGTGATCCCCACATTCGAC GCTCGGACAAGGTCGGACTCTTGACGCGGGCGATTAATCTCATTACGACC ATGCGGCAGCAGCTGGGCGGCGCTGGAGGAGCCTTTTTCGACGTGCAACG GGCCCCAACGGCGTGGCGAGGCGGTGGGAACGGCCACCATTATCATCACC ACAGTCAGGGCACACGACGTAGCAAGCGCACAATACGGGGCTCGGCGCTG TCGGCGGCATCGACGAACAACGACGACAACAAAGAACGCGACGACAACGA TGACGAAAACGGAGAGCGCCAACCGGGGAAGCGAGGATGTGTGAACCGTG TGCACTCTCGAAAATCTCCGACTCGATGGATTCCTGTCAGTATGATCCAG CACCAACAAAACTCCGATCCCACGACTCCGTCGCCTCAGACCTTCACCCC TCCTTCGACGCCGACGACCTCCTTTCCAGCTAACTTGCCCTTGAAGGAAC GCCTGGCCACACCCAAAGTGACGCACACGCTGCTGGCGTGCTTGGATTCT GCTTTCCTCGAGCCCTGCCGAGATGTGGTACCCGATAAAAAAGAGCCAAC GGCCTTGCAGGACGTGCCCTGGAAAGAAATATGCCGCATGCGCTGGAAGG CGGAGGAAGCCGAATTCCACGAGGAGCTACACCCCACGACCACGATTGAC TGGCGCCACGTGTATGTGCAGCAAGCCCGGGCCTTGCGGCTACCTCACTC CCCAAACTTTTTGTCCATAGGCTCAGTAGTTTCGTCGGGGGAATCCGGGG GCGTCTGCGGCTGGCTGCTGGCGCGCACCTCTTCCTACATCCCTTTGCCC TCACCTGTGGGCAGCTCGAGTGCGCCGCAGGCCTTGCTCTCCTTTATCCT GGTGATGCAAAATATCACGCACGACATGATCACTATCCCACACCAGCGTT TTGAGGTGCATATCAAGAGACAGGTCCCGTCACAGCAGCAGAAGCAGAAG CAAGGCCCGCGTGTCATTCCCACTCGCTCCATCTCCAACAGTTCCTCCAC TACCACCTCCTCCATCGGCAGCACCAGCGACGGAGATGGCGAGGGGGAAG AGCAGAAAGAACAGGCGAATATGCCGGTGATACTACAAGAGCCAACAGAA ATGCAGCTAAAGGAGCAAGGGTTAGACCCCTCCCTGTATCAGGCTTCCCT CATGTCATGCCAAGAGACGGATTTGAACGCGGACGGCAGCATTCCCTGGG TGTGCTACGAGGGAGTTGGTGGCTTGCGGCTGGGTCTGTTTGATACGGCC GTGCTTACTTTTTACGTTTTATTGCGCAGAGACCTTGGCATGCGTTCAGA CATGGGTGCAGAAAATGGGAAAGAGAAGGCGAAGGGGAAAGGGGAGGGGA TGAGTGCCGAGGAGGCGGAGACCTGGACGAAGGAGATGGCGTTCACGGCA TTAGTGCCGTCCAAGGTGCCGGCGGTGGCGGTTTCAGATGTCTGCAACAA GGAGGAGAAGGGCGACGATACGACGGAGGGAGGTGGGGTTTTGGATAGCG ATGAGGATGGAGACGGGTTAGGTAAAGAGGTGCGAGTGACGTTAGTGACG ACGACAAAGACTGAACAAGGGCCCTAA back to top
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