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Properties
| Property Name | Value |
|---|
| TranscriptId | 522579 |
| Track | FilteredModels2 |
| ProteinId | 522493 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:158958..160862 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_673 ID=mRNA_673|Name=jgi.p|Nanoce1779_2|522493|organism=Nannochloropsis oceanica|type=mRNA|length=1506bp
ATGACCATCAGTCATTTTACAACTGAAGGACTTGTGGAGCGAACATTCGT
CAGCGCGCTTGTGATTTGCTCTGCTTTGGCCGCAGTCGCATACAGGGATA
CCCTCCCTTTCTTACGTTTGCGGGGAGGGAGGGAGGGCTATAATACGCTT
GGAGGAAAAGGAAAAGCAGCACCTGCCACCCATGTACTGTCTGCAGTACA
GCAAAAAGACTTTGCTTCTTTCCAGATTAGGTTCCTGGTGATTCAATTAA
TGGCGACATTCATTGACTTCATCCAAGGACCGTATTTATATAAAGTTTAT
GAGAATTACGGCTTTGGCATGAAAGACATCGCCACACTTTACCTTCTAGG
ATTTGCATCCTCTGCCGTCTCCAGTCCCTTTGCCGGCGTATTCGCAGACA
CGTACGGCCGTCGGTTAGGCTGCGTGGCATTTGCCTTGCTGCAAGCTTCC
TCCTCACTCCTCCTTCACCACCCTTCCTTCCCCCTTCTCACCCTCGGTCG
TGTCCTGTCGGGTATCGCCACCTCCTTCCTTGCCACGTGCTTCGAGGCCT
GGATGATCTCCGAGCACAATCGTCTGGCGTTCCCCCCCTCTCTCGTGAAA
AATACGTTTTCCATGTATGTCTTTCTGATGGGGGTGGTGGCTGTATGGAG
TGGGGCGGTGGCGGGGGTTGTCGAAAAGGAGGGAGGGGTGCTGGCACCAT
TTGATGTGTGTGCATTGGTGGCCGGGGGGTTGGCAGTATTGTTGCCGCTT
GTCAGCGGGAGCGGTAGCACATTTTTGTCTTCAGTATCCTTCTCTCTCCG
TCCATCCTTGCCTTCCCTCCTCCGCTCTATTATTTTACCCACGAACAAAA
ACATTTTGTGGGTAGGTCTCACACAAGCCTTCTTCGAGGCAGCCATGTTC
ACCTGGGTGTTTCTATGGACCCCTTCGCTCGACACGGGGGAAATAACCTC
CTTGAATTTAGGGTTGGTTTTTGCGACGCTCATGGTGGGAGTTATGTGTG
GTTCATCTGTCTTTCGGATTCTGACCATGGAGAGGGGTGGGGGGGGGGAA
GGATATAGTGTTGAGGTTGTTTTGCTTGGGGCGTTGGTTGGGGGTGGTGT
GGCGATGATGGCGGCTGCATGGCCGGGGGAGGTTGGGGTAGCATGGCTGT
TGATTGATTTTGTAGTGTTCGAGGCGTCGGTGGGCGTCTTTTACGCGGCG
ATGGGAAGTATCCGCGCCAGGGTGATCCCGGAGACAGCAAGGGCGACGGT
CATGAATGGCATTCGGGTCTTGTTGAACGTGTTGATCGTTTTCATGTATT
TGGGACCGGTACGATTAGATGTGCCGATGGGAGAAAAGAGGCCGTTAGTG
CTGGGGTTGTGTAGTGCGATGGTATTTGTGGCGAGTGCATGCCATGCGCA
GTGGATGAGGGGCGAAGGGACGGGGACGGGAAAGAGGTTGGAGAGAGGAA
GTAAGAAGCAGGAGGAGGAAAGTTTGTTGGAGATTGTTTCCGAAAAGGCG
CAATAA back to topprotein sequence of jgi.p|Nanoce1779_2|522493 >mRNA_673-protein ID=mRNA_673-protein|Name=jgi.p|Nanoce1779_2|522493|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp
MTISHFTTEGLVERTFVSALVICSALAAVAYRDTLPFLRLRGGREGYNTL
GGKGKAAPATHVLSAVQQKDFASFQIRFLVIQLMATFIDFIQGPYLYKVY
ENYGFGMKDIATLYLLGFASSAVSSPFAGVFADTYGRRLGCVAFALLQAS
SSLLLHHPSFPLLTLGRVLSGIATSFLATCFEAWMISEHNRLAFPPSLVK
NTFSMYVFLMGVVAVWSGAVAGVVEKEGGVLAPFDVCALVAGGLAVLLPL
VSGSGSTFLSSVSFSLRPSLPSLLRSIILPTNKNILWVGLTQAFFEAAMF
TWVFLWTPSLDTGEITSLNLGLVFATLMVGVMCGSSVFRILTMERGGGGE
GYSVEVVLLGALVGGGVAMMAAAWPGEVGVAWLLIDFVVFEASVGVFYAA
MGSIRARVIPETARATVMNGIRVLLNVLIVFMYLGPVRLDVPMGEKRPLV
LGLCSAMVFVASACHAQWMRGEGTGTGKRLERGSKKQEEESLLEIVSEKA
Q* back to topmRNA from alignment at scaffold_2:158958..160862- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_673 ID=mRNA_673|Name=jgi.p|Nanoce1779_2|522493|organism=Nannochloropsis oceanica|type=mRNA|length=1905bp|location=Sequence derived from alignment at scaffold_2:158958..160862- (Nannochloropsis oceanica)
ATGACCATCAGTCATTTTACAACTGAAGGACTTGTGGAGCGAACATTCGT
CAGCGCGCTTGTGATTTGCTCTGCTTTGGCCGCAGTCGCATACAGGGATA
CCCTCCCTTTCTTACGTTTGCGGGGAGGGAGGGAGGGCTATAATACGCTT
GGAGGAAAAGGAAAAGCAGCACCTGCCACCCATGTACTGTCTGCAGTACA
GCAAAAAGACTTTGCTTCTTTCCAGATTAGGTTCCTGGTGATTCAATTAA
TGGCGACATTCATTGACTTCATCCAAGGACCGTATTTATATAAAGTTTAT
GAGAATTACGGCTTTGGCATGGTAAGGAGGGAAGAAGGGGAAGTGGGAGA
GGGAGGAAGAAGAGAAAAGATTCAGGTTTTAATAACATCTGGTTGATTAC
ATTGGTCTTTGTCGGCCTCAAATGGTGCACAAACGGAAGGGAAGGGATCG
AAACAACAGAACACATCGCATTGCGGATAGACGCACAATCCTCATGTACA
GGCTTTGACGAGCTCTGAGACTCGCCCTTCTCCCCTTTCTTTTTCCCTTT
CCTCTTCCTACCAGAAAGACATCGCCACACTTTACCTTCTAGGATTTGCA
TCCTCTGCCGTCTCCAGTCCCTTTGCCGGCGTATTCGCAGACACGTACGG
CCGTCGGTTAGGCTGCGTGGCATTTGCCTTGCTGCAAGCTTCCTCCTCAC
TCCTCCTTCACCACCCTTCCTTCCCCCTTCTCACCCTCGGTCGTGTCCTG
TCGGGTATCGCCACCTCCTTCCTTGCCACGTGCTTCGAGGCCTGGATGAT
CTCCGAGCACAATCGTCTGGCGTTCCCCCCCTCTCTCGTGAAAAATACGT
TTTCCATGTATGTCTTTCTGATGGGGGTGGTGGCTGTATGGAGTGGGGCG
GTGGCGGGGGTTGTCGAAAAGGAGGGAGGGGTGCTGGCACCATTTGATGT
GTGTGCATTGGTGGCCGGGGGGTTGGCAGTATTGTTGCCGCTTGTGTGGC
AGGAGGAGAATTATGGCATGGGAAGAGACGGGGAACCTGGAAAGAAAAGG
GAGAAAGAAGAGGGGAAGGAGTGCCACGGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCGGCAACAACAACAATAACAACAATAACGACAGCAGAA
GCAGCGGGAGCGGTAGCACATTTTTGTCTTCAGTATCCTTCTCTCTCCGT
CCATCCTTGCCTTCCCTCCTCCGCTCTATTATTTTACCCACGAACAAAAA
CATTTTGTGGGTAGGTCTCACACAAGCCTTCTTCGAGGCAGCCATGTTCA
CCTGGGTGTTTCTATGGACCCCTTCGCTCGACACGGGGGAAATAACCTCC
TTGAATTTAGGGTTGGTTTTTGCGACGCTCATGGTGGGAGTTATGTGTGG
TTCATCTGTCTTTCGGATTCTGACCATGGAGAGGGGTGGGGGGGGGGAAG
GATATAGTGTTGAGGTTGTTTTGCTTGGGGCGTTGGTTGGGGGTGGTGTG
GCGATGATGGCGGCTGCATGGCCGGGGGAGGTTGGGGTAGCATGGCTGTT
GATTGATTTTGTAGTGTTCGAGGCGTCGGTGGGCGTCTTTTACGCGGCGA
TGGGAAGTATCCGCGCCAGGGTGATCCCGGAGACAGCAAGGGCGACGGTC
ATGAATGGCATTCGGGTCTTGTTGAACGTGTTGATCGTTTTCATGTATTT
GGGACCGGTACGATTAGATGTGCCGATGGGAGAAAAGAGGCCGTTAGTGC
TGGGGTTGTGTAGTGCGATGGTATTTGTGGCGAGTGCATGCCATGCGCAG
TGGATGAGGGGCGAAGGGACGGGGACGGGAAAGAGGTTGGAGAGAGGAAG
TAAGAAGCAGGAGGAGGAAAGTTTGTTGGAGATTGTTTCCGAAAAGGCGC
AATAA back to topCoding sequence (CDS) from alignment at scaffold_2:158958..160862- >mRNA_673 ID=mRNA_673|Name=jgi.p|Nanoce1779_2|522493|organism=Nannochloropsis oceanica|type=CDS|length=4518bp|location=Sequence derived from alignment at scaffold_2:158958..160862- (Nannochloropsis oceanica)
CAGCGGGAGCGGTAGCACATTTTTGTCTTCAGTATCCTTCTCTCTCCGTC
CATCCTTGCCTTCCCTCCTCCGCTCTATTATTTTACCCACGAACAAAAAC
ATTTTGTGGGTAGGTCTCACACAAGCCTTCTTCGAGGCAGCCATGTTCAC
CTGGGTGTTTCTATGGACCCCTTCGCTCGACACGGGGGAAATAACCTCCT
TGAATTTAGGGTTGGTTTTTGCGACGCTCATGGTGGGAGTTATGTGTGGT
TCATCTGTCTTTCGGATTCTGACCATGGAGAGGGGTGGGGGGGGGGAAGG
ATATAGTGTTGAGGTTGTTTTGCTTGGGGCGTTGGTTGGGGGTGGTGTGG
CGATGATGGCGGCTGCATGGCCGGGGGAGGTTGGGGTAGCATGGCTGTTG
ATTGATTTTGTAGTGTTCGAGGCGTCGGTGGGCGTCTTTTACGCGGCGAT
GGGAAGTATCCGCGCCAGGGTGATCCCGGAGACAGCAAGGGCGACGGTCA
TGAATGGCATTCGGGTCTTGTTGAACGTGTTGATCGTTTTCATGTATTTG
GGACCGGTACGATTAGATGTGCCGATGGGAGAAAAGAGGCCGTTAGTGCT
GGGGTTGTGTAGTGCGATGGTATTTGTGGCGAGTGCATGCCATGCGCAGT
GGATGAGGGGCGAAGGGACGGGGACGGGAAAGAGGTTGGAGAGAGGAAGT
AAGAAGCAGGAGGAGGAAAGTTTGTTGGAGATTGTTTCCGAAAAGGCGCA
ATAAAAAGACATCGCCACACTTTACCTTCTAGGATTTGCATCCTCTGCCG
TCTCCAGTCCCTTTGCCGGCGTATTCGCAGACACGTACGGCCGTCGGTTA
GGCTGCGTGGCATTTGCCTTGCTGCAAGCTTCCTCCTCACTCCTCCTTCA
CCACCCTTCCTTCCCCCTTCTCACCCTCGGTCGTGTCCTGTCGGGTATCG
CCACCTCCTTCCTTGCCACGTGCTTCGAGGCCTGGATGATCTCCGAGCAC
AATCGTCTGGCGTTCCCCCCCTCTCTCGTGAAAAATACGTTTTCCATGTA
TGTCTTTCTGATGGGGGTGGTGGCTGTATGGAGTGGGGCGGTGGCGGGGG
TTGTCGAAAAGGAGGGAGGGGTGCTGGCACCATTTGATGTGTGTGCATTG
GTGGCCGGGGGGTTGGCAGTATTGTTGCCGCTTGTATGACCATCAGTCAT
TTTACAACTGAAGGACTTGTGGAGCGAACATTCGTCAGCGCGCTTGTGAT
TTGCTCTGCTTTGGCCGCAGTCGCATACAGGGATACCCTCCCTTTCTTAC
GTTTGCGGGGAGGGAGGGAGGGCTATAATACGCTTGGAGGAAAAGGAAAA
GCAGCACCTGCCACCCATGTACTGTCTGCAGTACAGCAAAAAGACTTTGC
TTCTTTCCAGATTAGGTTCCTGGTGATTCAATTAATGGCGACATTCATTG
ACTTCATCCAAGGACCGTATTTATATAAAGTTTATGAGAATTACGGCTTT
GGCATGCAGCGGGAGCGGTAGCACATTTTTGTCTTCAGTATCCTTCTCTC
TCCGTCCATCCTTGCCTTCCCTCCTCCGCTCTATTATTTTACCCACGAAC
AAAAACATTTTGTGGGTAGGTCTCACACAAGCCTTCTTCGAGGCAGCCAT
GTTCACCTGGGTGTTTCTATGGACCCCTTCGCTCGACACGGGGGAAATAA
CCTCCTTGAATTTAGGGTTGGTTTTTGCGACGCTCATGGTGGGAGTTATG
TGTGGTTCATCTGTCTTTCGGATTCTGACCATGGAGAGGGGTGGGGGGGG
GGAAGGATATAGTGTTGAGGTTGTTTTGCTTGGGGCGTTGGTTGGGGGTG
GTGTGGCGATGATGGCGGCTGCATGGCCGGGGGAGGTTGGGGTAGCATGG
CTGTTGATTGATTTTGTAGTGTTCGAGGCGTCGGTGGGCGTCTTTTACGC
GGCGATGGGAAGTATCCGCGCCAGGGTGATCCCGGAGACAGCAAGGGCGA
CGGTCATGAATGGCATTCGGGTCTTGTTGAACGTGTTGATCGTTTTCATG
TATTTGGGACCGGTACGATTAGATGTGCCGATGGGAGAAAAGAGGCCGTT
AGTGCTGGGGTTGTGTAGTGCGATGGTATTTGTGGCGAGTGCATGCCATG
CGCAGTGGATGAGGGGCGAAGGGACGGGGACGGGAAAGAGGTTGGAGAGA
GGAAGTAAGAAGCAGGAGGAGGAAAGTTTGTTGGAGATTGTTTCCGAAAA
GGCGCAATAAAAAGACATCGCCACACTTTACCTTCTAGGATTTGCATCCT
CTGCCGTCTCCAGTCCCTTTGCCGGCGTATTCGCAGACACGTACGGCCGT
CGGTTAGGCTGCGTGGCATTTGCCTTGCTGCAAGCTTCCTCCTCACTCCT
CCTTCACCACCCTTCCTTCCCCCTTCTCACCCTCGGTCGTGTCCTGTCGG
GTATCGCCACCTCCTTCCTTGCCACGTGCTTCGAGGCCTGGATGATCTCC
GAGCACAATCGTCTGGCGTTCCCCCCCTCTCTCGTGAAAAATACGTTTTC
CATGTATGTCTTTCTGATGGGGGTGGTGGCTGTATGGAGTGGGGCGGTGG
CGGGGGTTGTCGAAAAGGAGGGAGGGGTGCTGGCACCATTTGATGTGTGT
GCATTGGTGGCCGGGGGGTTGGCAGTATTGTTGCCGCTTGTATGACCATC
AGTCATTTTACAACTGAAGGACTTGTGGAGCGAACATTCGTCAGCGCGCT
TGTGATTTGCTCTGCTTTGGCCGCAGTCGCATACAGGGATACCCTCCCTT
TCTTACGTTTGCGGGGAGGGAGGGAGGGCTATAATACGCTTGGAGGAAAA
GGAAAAGCAGCACCTGCCACCCATGTACTGTCTGCAGTACAGCAAAAAGA
CTTTGCTTCTTTCCAGATTAGGTTCCTGGTGATTCAATTAATGGCGACAT
TCATTGACTTCATCCAAGGACCGTATTTATATAAAGTTTATGAGAATTAC
GGCTTTGGCATGCAGCGGGAGCGGTAGCACATTTTTGTCTTCAGTATCCT
TCTCTCTCCGTCCATCCTTGCCTTCCCTCCTCCGCTCTATTATTTTACCC
ACGAACAAAAACATTTTGTGGGTAGGTCTCACACAAGCCTTCTTCGAGGC
AGCCATGTTCACCTGGGTGTTTCTATGGACCCCTTCGCTCGACACGGGGG
AAATAACCTCCTTGAATTTAGGGTTGGTTTTTGCGACGCTCATGGTGGGA
GTTATGTGTGGTTCATCTGTCTTTCGGATTCTGACCATGGAGAGGGGTGG
GGGGGGGGAAGGATATAGTGTTGAGGTTGTTTTGCTTGGGGCGTTGGTTG
GGGGTGGTGTGGCGATGATGGCGGCTGCATGGCCGGGGGAGGTTGGGGTA
GCATGGCTGTTGATTGATTTTGTAGTGTTCGAGGCGTCGGTGGGCGTCTT
TTACGCGGCGATGGGAAGTATCCGCGCCAGGGTGATCCCGGAGACAGCAA
GGGCGACGGTCATGAATGGCATTCGGGTCTTGTTGAACGTGTTGATCGTT
TTCATGTATTTGGGACCGGTACGATTAGATGTGCCGATGGGAGAAAAGAG
GCCGTTAGTGCTGGGGTTGTGTAGTGCGATGGTATTTGTGGCGAGTGCAT
GCCATGCGCAGTGGATGAGGGGCGAAGGGACGGGGACGGGAAAGAGGTTG
GAGAGAGGAAGTAAGAAGCAGGAGGAGGAAAGTTTGTTGGAGATTGTTTC
CGAAAAGGCGCAATAAAAAGACATCGCCACACTTTACCTTCTAGGATTTG
CATCCTCTGCCGTCTCCAGTCCCTTTGCCGGCGTATTCGCAGACACGTAC
GGCCGTCGGTTAGGCTGCGTGGCATTTGCCTTGCTGCAAGCTTCCTCCTC
ACTCCTCCTTCACCACCCTTCCTTCCCCCTTCTCACCCTCGGTCGTGTCC
TGTCGGGTATCGCCACCTCCTTCCTTGCCACGTGCTTCGAGGCCTGGATG
ATCTCCGAGCACAATCGTCTGGCGTTCCCCCCCTCTCTCGTGAAAAATAC
GTTTTCCATGTATGTCTTTCTGATGGGGGTGGTGGCTGTATGGAGTGGGG
CGGTGGCGGGGGTTGTCGAAAAGGAGGGAGGGGTGCTGGCACCATTTGAT
GTGTGTGCATTGGTGGCCGGGGGGTTGGCAGTATTGTTGCCGCTTGTATG
ACCATCAGTCATTTTACAACTGAAGGACTTGTGGAGCGAACATTCGTCAG
CGCGCTTGTGATTTGCTCTGCTTTGGCCGCAGTCGCATACAGGGATACCC
TCCCTTTCTTACGTTTGCGGGGAGGGAGGGAGGGCTATAATACGCTTGGA
GGAAAAGGAAAAGCAGCACCTGCCACCCATGTACTGTCTGCAGTACAGCA
AAAAGACTTTGCTTCTTTCCAGATTAGGTTCCTGGTGATTCAATTAATGG
CGACATTCATTGACTTCATCCAAGGACCGTATTTATATAAAGTTTATGAG
AATTACGGCTTTGGCATG back to top
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