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Properties
Property Name | Value |
TranscriptId | 651862 |
Track | FilteredModels2 |
ProteinId | 651776 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_18 | supercontig | scaffold_18:503710..506533 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6711 ID=mRNA_6711|Name=jgi.p|Nanoce1779_2|651776|organism=Nannochloropsis oceanica|type=mRNA|length=1980bp ATGCTCAACGCTGCCACCACCCCCCGCGACGGCATCCTCCTCGTCCGCGA ATGCCCTTCCTCCCTCCCTCCCTCCGTCCCTCTTTCACTGTCCCTCACCG AATCCGACGTCCAAGCCGTTTTTGCCGCCTACGGACAGTTAAAGAACGTG CACCGACGCATGCTCCTCTCTTCCCTCCCTCACTCCTCCGCTTCCTACTC CTCATCTTCTCCTCACTACACAACCGTCACCCCTCCCACGGGCCTTCCTT CCCTCCCTCTACCTCCTGGGAATACCCTGGCGTTCCTCGTCGAGTATTAC GACGTGCAAGATGCGAAAACAGCGGCTTTCGAACTCTCTGCTACCACCCC CTGGGGTAATTCCATTATTGTAGACGAAGCAGAGAGATCAGAAAAGGAAC GGCAATTAGGACAGCAGCTATTGCTCACCCTGCACAGATGGAGGGAGGAG CAGAGAGCGGCGCAGCTGTCGGCGGCGCTGTCGTCTTCCTTGGGAGTGGC TGCGACGGGGGGAGAGGGAGCAGGGGATGAAGTGAGGGAGGGAGTGGGAG GAGGGAGTACTGGTGGAGTTTTTTATGGGGGATCGCCGCAGAGTTCGGTG TCGGGGATGACGACAGCTGGAACTTCCTCTTCGTCCTCCCTGAGTCCCTC ACAGCTGCTGTTTTTGCAGCAAGCAACTTCCTGCCCGGGTGTCACCTCCG CAGCGACGCTGATGAAGATGGCCAACGGAGCAGGGATTGGGGGGGGAGGG ACATCAGGAGGAGGGATGGGAGAGACGGAGTTTCATCTAGACGTGGAGAG AATTCTGATGGGGCTGGACAGACGGACGACGATTATGGTGCGGAATGTGC CTAACAAGTACTCGCAACAACTCCTCCTCAACGAGATCAACACCGCCCAC AAGGGGAAATACGACTTTTTCTACCTTCCGATTGACTTCAAGAATAAATG CAACGTTGGCTACGCGTTCATCAATTTCATCGATCCCAAGTCCATCATTC CTTTCTTCAAAGAATTTAATGGCCAGAGGTGGCATAACTTCAACAGCGAA AAAGTTTGTGCCATTTCCTACGCCCGCATCCAAGGCCGGCAAAGCATGAT CTCCCGCTTTTCTAATTCCTCCCTCATGGAGAAAGATGGGGAGTATCGCC CATTGCTCTTTCACTCTTCCGGGCCTGACCGAGGCAAACCTGAGCCATTT CCCTTGTCCTCTAAGCACTATGGAAGGAGGTCGGGAAGTAACACTCCCAC CACCCCTACGAGCTATGTGATGGGCATGGCCGGATTAAACCTCGGGGGGA TGGGGATGATGTGAGGGAGGAAGGGAGGGAATTAGAGGTGGAGAGAGAGA GAAGGTGGATCTCATTTTTGTGCACCTGGCATTAGTAGAGAGTCAGGCGG GCAAGAGATGAGAAGTGAGTGCCCGTATGCATGTCCTTCCCATTGTGGAA GAGCGAGCGAGTGTGCGTGTCTCGGTAGATGTGTCAGGCCTTTTATTTTC ATTGGTGTTCATATATATATATATATATGTGTGTGTGTATCTGGCTGTCT GTCTGTCTGCGTGTGTCAGCTCTGATGTCTTGTCACGATTTTCTGTCCTC GTTATTCACACACACGGGGAGCAGCAGCAGCGGCAGTAGCAGCATCAGCA GGAGGGTTGCCATTTGTAGCCGGCCTGGTAGTGTGTGAAGCAAATGGACA GAGGGAAGAAAGCTGTTGACGAAGCGAGCGATGAGAATGAGGGGATCGTG TGTAACATCACATCCATTTCCTTCACTATTTATTCGTCCACTCTACCCCA CTATGTTTTAATGCTTTTGGATCAGGAATTAATATTCTTCGATTTACTGG TCAGTTGGATAGACAAATATTGAGGTAAAAAAGAGTGTATCCTGAACGAA GCGGCTCAGGATAAGAAGCAGTTGCAACAGCAACATCAGCAGCAGGAGCC AATTGGACGACAGGTAATATACATATACCA back to topprotein sequence of jgi.p|Nanoce1779_2|651776 >mRNA_6711-protein ID=mRNA_6711-protein|Name=jgi.p|Nanoce1779_2|651776|organism=Nannochloropsis oceanica|type=polypeptide|length=438bp MLNAATTPRDGILLVRECPSSLPPSVPLSLSLTESDVQAVFAAYGQLKNV HRRMLLSSLPHSSASYSSSSPHYTTVTPPTGLPSLPLPPGNTLAFLVEYY DVQDAKTAAFELSATTPWGNSIIVDEAERSEKERQLGQQLLLTLHRWREE QRAAQLSAALSSSLGVAATGGEGAGDEVREGVGGGSTGGVFYGGSPQSSV SGMTTAGTSSSSSLSPSQLLFLQQATSCPGVTSAATLMKMANGAGIGGGG TSGGGMGETEFHLDVERILMGLDRRTTIMVRNVPNKYSQQLLLNEINTAH KGKYDFFYLPIDFKNKCNVGYAFINFIDPKSIIPFFKEFNGQRWHNFNSE KVCAISYARIQGRQSMISRFSNSSLMEKDGEYRPLLFHSSGPDRGKPEPF PLSSKHYGRRSGSNTPTTPTSYVMGMAGLNLGGMGMM* back to topmRNA from alignment at scaffold_18:503710..506533+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6711 ID=mRNA_6711|Name=jgi.p|Nanoce1779_2|651776|organism=Nannochloropsis oceanica|type=mRNA|length=2824bp|location=Sequence derived from alignment at scaffold_18:503710..506533+ (Nannochloropsis oceanica) ATGCTCAACGCTGCCACCACCCCCCGCGACGGCATCCTCCTCGTCCGCGA
ATGCCCTTCCTCCCTCCCTCCCTCCGTCCCTCTTTCACTGTCCCTCACCG
AATCCGACGTCCAAGCCGTTTTTGCCGCCTACGGACAGTTAAAGAACGTG
CACCGACGCATGCTCCTCTCTTCCCTCCCTCACTCCTCCGCTTCCTACTC
CTCATCTTCTCCTCACTACACAACCGTCACCCCTCCCACGGGCCTTCCTT
CCCTCCCTCTACCTCCTGGGAATACCCTGGCGTTCCTCGTCGAGTATTAC
GACGTGCAAGATGCGAAAACAGCGGCTTTCGAACTCTCTGCTACCACCCC
CTGGGGTAATTCCATTATTGTAGACGAAGCAGAGAGATCAGAAAAGGAAC
GGCAATTAGGACAGCAGCTATTGCTCACCCTGCACAGATGGAGGGAGGAG
CAGAGAGCGGCGCAGCTGTCGGCGGCGCTGTCGTCTTCCTTGGGAGTGGC
TGCGACGGGGGGAGAGGGAGCAGGGGATGAAGTGAGGGAGGGAGTGGGAG
GAGGGAGTACTGGTGGAGTTTTTTATGGGGGATCGCCGCAGAGTTCGGTG
TCGGGGATGACGACAGCTGGAACTTCCTCTTCGTCCTCCCTGAGTCCCTC
ACAGCTGCTGTTTTTGCAGCAAGCAACTTCCTGCCCGGGTGTCACCTCCG
CAGCGACGCTGATGAAGATGGCCAACGGTGTGAGCAACAACAACATCATC
AACAACAACAACAACGTCAATAACAGCAACAACAACAACAACAACAACAA
TAACCACAACAACCACAACGGTGGGATCGGCAGTGCCGGCCGTGGCCCTG
CCTACGGTCGAGGGGGAGTAGGAGAGTCGCAAAGCATGACACCCACCATC
GGTCACCACTCCTCCTCTTCCCCCTACGGAGGCAGTCATCCGTCCTCTGC
CCCTTCCTCCTCTTCGGTCGCATACCACCACCACCATCAGCAGCTACTCC
AGCAGCAGCAACAGCAGCAACAACAGCTTTACATGGATAGCATGTCTCCT
ATTTCCTACGACGGCTTGGGAGGAGGGATGTTGGGGGGAAGCACGGATGC
AGCAGCAGCCGCCGCCGCCGCCGCTGCCTTCAAGGGCATGTGGATCTCTC
CAAATCACCACCTCGGCTCTCCCCCCCCGATGGGGGGAGGAAGGGGGAGG
GTGTCACCCAATGCGGGTGGCCAATACCCCAGGCGGATGACGACGACGGC
GGGCGCGGGTCGGTACCCTCCGTCGTTTGGAGGAGCAGGGATTGGGGGGG
GAGGGACATCAGGAGGAGGGATGGGAGAGACGGAGTTTCATCTAGACGTG
GAGAGAATTCTGATGGGGCTGGACAGACGGACGACGATTATGGTGCGGAA
TGTGCCTAACAAGGTAGGTTGGTATTGTTTCCTCCCTCCCTCCCTCCCTT
CAGTTCTGGCAACAACTCCTCATTGAAATCAACATCGTCTGCAATGTGAA
AGACGACGATTAGCTCATCCTCTCTCCCTCCTCTCGCTCCCTCCTTCCCT
CCCTCCAGTACTCGCAACAACTCCTCCTCAACGAGATCAACACCGCCCAC
AAGGGGAAATACGACTTTTTCTACCTTCCGATTGACTTCAAGAATAAATG
CAACGTTGGCTACGCGTTCATCAATTTCATCGATCCCAAGTCCATCATTC
CTTTCTTCAAAGAATTTAATGGCCAGAGGTAAGCGTCATTTCCTCCTTTT
TCTCCCTCTCTCCCCCCTTCCTTCCTCCCTGTCTCTCGTACATGATCAAG
TCAACTACTTCAACTCAAACCTTCCCCCTTCCCTCGACTCCCTCTCTTCC
TCCCTCGCTCCCTCCCTTCCAGGTGGCATAACTTCAACAGCGAAAAAGTT
TGTGCCATTTCCTACGCCCGCATCCAAGGCCGGCAAAGCATGATCTCCCG
CTTTTCTAATTCCTCCCTCATGGAGAAAGATGGGGAGTATCGCCCATTGC
TCTTTCACTCTTCCGGGCCTGACCGAGGCAAACCTGAGCCATTTCCCTTG
TCCTCTAAGCACTATGGAAGGAGGTCGGGAAGTAACACTCCCACCACCCC
TACGAGCTATGTGATGGGCATGGCCGGATTAAACCTCGGGGGGATGGGGA
TGATGTGAGGGAGGAAGGGAGGGAATTAGAGGTGGAGAGAGAGAGAAGGT
GGATCTCATTTTTGTGCACCTGGCATTAGTAGAGAGTCAGGCGGGCAAGA
GATGAGAAGTGAGTGCCCGTATGCATGTCCTTCCCATTGTGGAAGAGCGA
GCGAGTGTGCGTGTCTCGGTAGATGTGTCAGGCCTTTTATTTTCATTGGT
GTTCATATATATATATATATATGTGTGTGTGTATCTGGCTGTCTGTCTGT
CTGCGTGTGTCAGCTCTGATGTCTTGTCACGATTTTCTGTCCTCGTTATT
CACACACACGGGGAGCAGCAGCAGCGGCAGTAGCAGCATCAGCAGGAGGG
TTGCCATTTGTAGCCGGCCTGGTAGTGTGTGAAGCAAATGGACAGAGGGA
AGAAAGCTGTTGACGAAGCGAGCGATGAGAATGAGGGGATCGTGTGTAAC
ATCACATCCATTTCCTTCACTATTTATTCGTCCACTCTACCCCACTATGT
TTTAATGCTTTTGGATCAGGAATTAATATTCTTCGATTTACTGGTCAGTT
GGATAGACAAATATTGAGGTAAAAAAGAGTGTATCCTGAACGAAGCGGCT
CAGGATAAGAAGCAGTTGCAACAGCAACATCAGCAGCAGGAGCCAATTGG
ACGACAGGTAATATACATATACCA back to topCoding sequence (CDS) from alignment at scaffold_18:503710..506533+ >mRNA_6711 ID=mRNA_6711|Name=jgi.p|Nanoce1779_2|651776|organism=Nannochloropsis oceanica|type=CDS|length=5256bp|location=Sequence derived from alignment at scaffold_18:503710..506533+ (Nannochloropsis oceanica) ATGCTCAACGCTGCCACCACCCCCCGCGACGGCATCCTCCTCGTCCGCGA ATGCCCTTCCTCCCTCCCTCCCTCCGTCCCTCTTTCACTGTCCCTCACCG AATCCGACGTCCAAGCCGTTTTTGCCGCCTACGGACAGTTAAAGAACGTG CACCGACGCATGCTCCTCTCTTCCCTCCCTCACTCCTCCGCTTCCTACTC CTCATCTTCTCCTCACTACACAACCGTCACCCCTCCCACGGGCCTTCCTT CCCTCCCTCTACCTCCTGGGAATACCCTGGCGTTCCTCGTCGAGTATTAC GACGTGCAAGATGCGAAAACAGCGGCTTTCGAACTCTCTGCTACCACCCC CTGGGGTAATTCCATTATTGTAGACGAAGCAGAGAGATCAGAAAAGGAAC GGCAATTAGGACAGCAGCTATTGCTCACCCTGCACAGATGGAGGGAGGAG CAGAGAGCGGCGCAGCTGTCGGCGGCGCTGTCGTCTTCCTTGGGAGTGGC TGCGACGGGGGGAGAGGGAGCAGGGGATGAAGTGAGGGAGGGAGTGGGAG GAGGGAGTACTGGTGGAGTTTTTTATGGGGGATCGCCGCAGAGTTCGGTG TCGGGGATGACGACAGCTGGAACTTCCTCTTCGTCCTCCCTGAGTCCCTC ACAGCTGCTGTTTTTGCAGCAAGCAACTTCCTGCCCGGGTGTCACCTCCG CAGCGACGCTGATGAAGATGGCCAACGGAGCAGGGATTGGGGGGGGAGGG ACATCAGGAGGAGGGATGGGAGAGACGGAGTTTCATCTAGACGTGGAGAG AATTCTGATGGGGCTGGACAGACGGACGACGATTATGGTGCGGAATGTGC CTAACAAGTACTCGCAACAACTCCTCCTCAACGAGATCAACACCGCCCAC AAGGGGAAATACGACTTTTTCTACCTTCCGATTGACTTCAAGAATAAATG CAACGTTGGCTACGCGTTCATCAATTTCATCGATCCCAAGTCCATCATTC CTTTCTTCAAAGAATTTAATGGCCAGAGGTGGCATAACTTCAACAGCGAA AAAGTTTGTGCCATTTCCTACGCCCGCATCCAAGGCCGGCAAAGCATGAT CTCCCGCTTTTCTAATTCCTCCCTCATGGAGAAAGATGGGGAGTATCGCC CATTGCTCTTTCACTCTTCCGGGCCTGACCGAGGCAAACCTGAGCCATTT CCCTTGTCCTCTAAGCACTATGGAAGGAGGTCGGGAAGTAACACTCCCAC CACCCCTACGAGCTATGTGATGGGCATGGCCGGATTAAACCTCGGGGGGA TGGGGATGATGTGAATGCTCAACGCTGCCACCACCCCCCGCGACGGCATC CTCCTCGTCCGCGAATGCCCTTCCTCCCTCCCTCCCTCCGTCCCTCTTTC ACTGTCCCTCACCGAATCCGACGTCCAAGCCGTTTTTGCCGCCTACGGAC AGTTAAAGAACGTGCACCGACGCATGCTCCTCTCTTCCCTCCCTCACTCC TCCGCTTCCTACTCCTCATCTTCTCCTCACTACACAACCGTCACCCCTCC CACGGGCCTTCCTTCCCTCCCTCTACCTCCTGGGAATACCCTGGCGTTCC TCGTCGAGTATTACGACGTGCAAGATGCGAAAACAGCGGCTTTCGAACTC TCTGCTACCACCCCCTGGGGTAATTCCATTATTGTAGACGAAGCAGAGAG ATCAGAAAAGGAACGGCAATTAGGACAGCAGCTATTGCTCACCCTGCACA GATGGAGGGAGGAGCAGAGAGCGGCGCAGCTGTCGGCGGCGCTGTCGTCT TCCTTGGGAGTGGCTGCGACGGGGGGAGAGGGAGCAGGGGATGAAGTGAG GGAGGGAGTGGGAGGAGGGAGTACTGGTGGAGTTTTTTATGGGGGATCGC CGCAGAGTTCGGTGTCGGGGATGACGACAGCTGGAACTTCCTCTTCGTCC TCCCTGAGTCCCTCACAGCTGCTGTTTTTGCAGCAAGCAACTTCCTGCCC GGGTGTCACCTCCGCAGCGACGCTGATGAAGATGGCCAACGGAGCAGGGA TTGGGGGGGGAGGGACATCAGGAGGAGGGATGGGAGAGACGGAGTTTCAT CTAGACGTGGAGAGAATTCTGATGGGGCTGGACAGACGGACGACGATTAT GGTGCGGAATGTGCCTAACAAGTACTCGCAACAACTCCTCCTCAACGAGA TCAACACCGCCCACAAGGGGAAATACGACTTTTTCTACCTTCCGATTGAC TTCAAGAATAAATGCAACGTTGGCTACGCGTTCATCAATTTCATCGATCC CAAGTCCATCATTCCTTTCTTCAAAGAATTTAATGGCCAGAGGTGGCATA ACTTCAACAGCGAAAAAGTTTGTGCCATTTCCTACGCCCGCATCCAAGGC CGGCAAAGCATGATCTCCCGCTTTTCTAATTCCTCCCTCATGGAGAAAGA TGGGGAGTATCGCCCATTGCTCTTTCACTCTTCCGGGCCTGACCGAGGCA AACCTGAGCCATTTCCCTTGTCCTCTAAGCACTATGGAAGGAGGTCGGGA AGTAACACTCCCACCACCCCTACGAGCTATGTGATGGGCATGGCCGGATT AAACCTCGGGGGGATGGGGATGATGTGAATGCTCAACGCTGCCACCACCC CCCGCGACGGCATCCTCCTCGTCCGCGAATGCCCTTCCTCCCTCCCTCCC TCCGTCCCTCTTTCACTGTCCCTCACCGAATCCGACGTCCAAGCCGTTTT TGCCGCCTACGGACAGTTAAAGAACGTGCACCGACGCATGCTCCTCTCTT CCCTCCCTCACTCCTCCGCTTCCTACTCCTCATCTTCTCCTCACTACACA ACCGTCACCCCTCCCACGGGCCTTCCTTCCCTCCCTCTACCTCCTGGGAA TACCCTGGCGTTCCTCGTCGAGTATTACGACGTGCAAGATGCGAAAACAG CGGCTTTCGAACTCTCTGCTACCACCCCCTGGGGTAATTCCATTATTGTA GACGAAGCAGAGAGATCAGAAAAGGAACGGCAATTAGGACAGCAGCTATT GCTCACCCTGCACAGATGGAGGGAGGAGCAGAGAGCGGCGCAGCTGTCGG CGGCGCTGTCGTCTTCCTTGGGAGTGGCTGCGACGGGGGGAGAGGGAGCA GGGGATGAAGTGAGGGAGGGAGTGGGAGGAGGGAGTACTGGTGGAGTTTT TTATGGGGGATCGCCGCAGAGTTCGGTGTCGGGGATGACGACAGCTGGAA CTTCCTCTTCGTCCTCCCTGAGTCCCTCACAGCTGCTGTTTTTGCAGCAA GCAACTTCCTGCCCGGGTGTCACCTCCGCAGCGACGCTGATGAAGATGGC CAACGGAGCAGGGATTGGGGGGGGAGGGACATCAGGAGGAGGGATGGGAG AGACGGAGTTTCATCTAGACGTGGAGAGAATTCTGATGGGGCTGGACAGA CGGACGACGATTATGGTGCGGAATGTGCCTAACAAGTACTCGCAACAACT CCTCCTCAACGAGATCAACACCGCCCACAAGGGGAAATACGACTTTTTCT ACCTTCCGATTGACTTCAAGAATAAATGCAACGTTGGCTACGCGTTCATC AATTTCATCGATCCCAAGTCCATCATTCCTTTCTTCAAAGAATTTAATGG CCAGAGGTGGCATAACTTCAACAGCGAAAAAGTTTGTGCCATTTCCTACG CCCGCATCCAAGGCCGGCAAAGCATGATCTCCCGCTTTTCTAATTCCTCC CTCATGGAGAAAGATGGGGAGTATCGCCCATTGCTCTTTCACTCTTCCGG GCCTGACCGAGGCAAACCTGAGCCATTTCCCTTGTCCTCTAAGCACTATG GAAGGAGGTCGGGAAGTAACACTCCCACCACCCCTACGAGCTATGTGATG GGCATGGCCGGATTAAACCTCGGGGGGATGGGGATGATGTGAATGCTCAA CGCTGCCACCACCCCCCGCGACGGCATCCTCCTCGTCCGCGAATGCCCTT CCTCCCTCCCTCCCTCCGTCCCTCTTTCACTGTCCCTCACCGAATCCGAC GTCCAAGCCGTTTTTGCCGCCTACGGACAGTTAAAGAACGTGCACCGACG CATGCTCCTCTCTTCCCTCCCTCACTCCTCCGCTTCCTACTCCTCATCTT CTCCTCACTACACAACCGTCACCCCTCCCACGGGCCTTCCTTCCCTCCCT CTACCTCCTGGGAATACCCTGGCGTTCCTCGTCGAGTATTACGACGTGCA AGATGCGAAAACAGCGGCTTTCGAACTCTCTGCTACCACCCCCTGGGGTA ATTCCATTATTGTAGACGAAGCAGAGAGATCAGAAAAGGAACGGCAATTA GGACAGCAGCTATTGCTCACCCTGCACAGATGGAGGGAGGAGCAGAGAGC GGCGCAGCTGTCGGCGGCGCTGTCGTCTTCCTTGGGAGTGGCTGCGACGG GGGGAGAGGGAGCAGGGGATGAAGTGAGGGAGGGAGTGGGAGGAGGGAGT ACTGGTGGAGTTTTTTATGGGGGATCGCCGCAGAGTTCGGTGTCGGGGAT GACGACAGCTGGAACTTCCTCTTCGTCCTCCCTGAGTCCCTCACAGCTGC TGTTTTTGCAGCAAGCAACTTCCTGCCCGGGTGTCACCTCCGCAGCGACG CTGATGAAGATGGCCAACGGAGCAGGGATTGGGGGGGGAGGGACATCAGG AGGAGGGATGGGAGAGACGGAGTTTCATCTAGACGTGGAGAGAATTCTGA TGGGGCTGGACAGACGGACGACGATTATGGTGCGGAATGTGCCTAACAAG TACTCGCAACAACTCCTCCTCAACGAGATCAACACCGCCCACAAGGGGAA ATACGACTTTTTCTACCTTCCGATTGACTTCAAGAATAAATGCAACGTTG GCTACGCGTTCATCAATTTCATCGATCCCAAGTCCATCATTCCTTTCTTC AAAGAATTTAATGGCCAGAGGTGGCATAACTTCAACAGCGAAAAAGTTTG TGCCATTTCCTACGCCCGCATCCAAGGCCGGCAAAGCATGATCTCCCGCT TTTCTAATTCCTCCCTCATGGAGAAAGATGGGGAGTATCGCCCATTGCTC TTTCACTCTTCCGGGCCTGACCGAGGCAAACCTGAGCCATTTCCCTTGTC CTCTAAGCACTATGGAAGGAGGTCGGGAAGTAACACTCCCACCACCCCTA CGAGCTATGTGATGGGCATGGCCGGATTAAACCTCGGGGGGATGGGGATG ATGTGA back to top
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