Properties
| Property Name | Value |
|---|
| TranscriptId | 597859 |
| Track | FilteredModels2 |
| ProteinId | 597773 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:493061..494423 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6706 ID=mRNA_6706|Name=jgi.p|Nanoce1779_2|597773|organism=Nannochloropsis oceanica|type=mRNA|length=1363bp
GGGGGAGGAGGAGGAGGAGGGGGGGGGGGCAATGCCCTTGTCCTTGGCAA
TTGGCCTGGCACTGACACAGCTGGCGCCAATTGTGAAAAAAGAGCAGACA
TTTGTGACGGACTTGTTTAAGCTCAAGCCAAAAGAGAACGAGGAGGACCA
ACGGAAACTACAGAGTGTGCTAGAGGTGGAGTTTGATAAGCTGAGGGAGA
AGCTGACGGAGCAGGCAGAAATGGCGACGGATGTGGACCCGTTTGAAGGG
CTGGCGATTCTGGCGGTCATGACGCAGATATTCAGTCCACCCAATGGAAG
CAGCAGCAGCTGTAATAGCAGCAGTAGTTGTGGTGAAAAAATAAGAATGG
GCGCGGCGGCCCCTGCTTTTACGGGCTTGGTACCTGAGGACCACTTCATG
TCATTGGTCTTGCTGTCGTTGCAACAGTCCTTGGCCACGAAATTCAATCA
TTTTATTTCCGAGCAAGACGCTTGGCTCAGCCACCAGTCTCCGGACATCA
AGCGCGCAGGCGTGCTGGCTCCATTTGCCAAATTTCCTGTCTTTGTGGAC
CGACTTGCGTTGGCTGTGAGGGGGCATCCGATCGACGTAGCTAACGCGGC
GTTGCAGAAACTGTCAGTAGCGCTCTTTGCCTGGTTAGAGCGGATCGCCC
GTAAGGGAGACCCCAAATACGCCGATGTCGTGCGGTTAGAAAATTACTAT
TTCTTCGTCCAGACTATGAGTCCGCGCCAGCAACGGCTTGTGGGCTCGCA
AGTCTTGACTCCGTACATCGATCAGGGGCAGGCATGTCACGAGGCGGCGG
TACAGCGGTACGTGGCTTGGTCCTTGGAATACGAATTCCCGCAGGTCACA
GCATTTTTTATGCAGCTGGAGGAGCTGATTGTTAAAGTGGGTGCGGAGGA
CGTAAGCATTCACGTGCCCAAGGCGGCCTTGCTCAAGTTGATGCAAGAGC
CCTGTTCACGCAAGGCAGTGGCCGAAGGGTTGGCGACAGTATTTCGACGG
GTCCGCAAGCATATCAGCGACGACACCGGCTTATTCCTGCCTTTGTGGGA
TCGGATCATCGCATTGCTCTCGCAGCGATTTGTTCGGTATGAAGAGATTG
CCCTGCAGTGCTACGATGTCAGGTTAGAGCCGTCGGCCACCCTGATGCGG
CAGCTCGCGCAGGAATGCCGGTCGCTGGGAGGGAAGTAAGGAGCACTAGA
GGGGTTGGAAGGTTGAAGATCGAATGTACCACAATTGTACATACCAAATA
AATAACGATATGGCGATAGCATGGTGAGCAAGATCTTTGCTGTTCCTGCC
TTGTTGCATTCTTAGAGCCTTCTTCGGTGCCGTCATGCGTGCATGGCGGC
ATTCAAGCCGTCC back to topprotein sequence of jgi.p|Nanoce1779_2|597773 >mRNA_6706-protein ID=mRNA_6706-protein|Name=jgi.p|Nanoce1779_2|597773|organism=Nannochloropsis oceanica|type=polypeptide|length=386bp
MPLSLAIGLALTQLAPIVKKEQTFVTDLFKLKPKENEEDQRKLQSVLEVE
FDKLREKLTEQAEMATDVDPFEGLAILAVMTQIFSPPNGSSSSCNSSSSC
GEKIRMGAAAPAFTGLVPEDHFMSLVLLSLQQSLATKFNHFISEQDAWLS
HQSPDIKRAGVLAPFAKFPVFVDRLALAVRGHPIDVANAALQKLSVALFA
WLERIARKGDPKYADVVRLENYYFFVQTMSPRQQRLVGSQVLTPYIDQGQ
ACHEAAVQRYVAWSLEYEFPQVTAFFMQLEELIVKVGAEDVSIHVPKAAL
LKLMQEPCSRKAVAEGLATVFRRVRKHISDDTGLFLPLWDRIIALLSQRF
VRYEEIALQCYDVRLEPSATLMRQLAQECRSLGGK* back to topmRNA from alignment at scaffold_18:493061..494423- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6706 ID=mRNA_6706|Name=jgi.p|Nanoce1779_2|597773|organism=Nannochloropsis oceanica|type=mRNA|length=1363bp|location=Sequence derived from alignment at scaffold_18:493061..494423- (Nannochloropsis oceanica)
GGGGGAGGAGGAGGAGGAGGGGGGGGGGGCAATGCCCTTGTCCTTGGCAA
TTGGCCTGGCACTGACACAGCTGGCGCCAATTGTGAAAAAAGAGCAGACA
TTTGTGACGGACTTGTTTAAGCTCAAGCCAAAAGAGAACGAGGAGGACCA
ACGGAAACTACAGAGTGTGCTAGAGGTGGAGTTTGATAAGCTGAGGGAGA
AGCTGACGGAGCAGGCAGAAATGGCGACGGATGTGGACCCGTTTGAAGGG
CTGGCGATTCTGGCGGTCATGACGCAGATATTCAGTCCACCCAATGGAAG
CAGCAGCAGCTGTAATAGCAGCAGTAGTTGTGGTGAAAAAATAAGAATGG
GCGCGGCGGCCCCTGCTTTTACGGGCTTGGTACCTGAGGACCACTTCATG
TCATTGGTCTTGCTGTCGTTGCAACAGTCCTTGGCCACGAAATTCAATCA
TTTTATTTCCGAGCAAGACGCTTGGCTCAGCCACCAGTCTCCGGACATCA
AGCGCGCAGGCGTGCTGGCTCCATTTGCCAAATTTCCTGTCTTTGTGGAC
CGACTTGCGTTGGCTGTGAGGGGGCATCCGATCGACGTAGCTAACGCGGC
GTTGCAGAAACTGTCAGTAGCGCTCTTTGCCTGGTTAGAGCGGATCGCCC
GTAAGGGAGACCCCAAATACGCCGATGTCGTGCGGTTAGAAAATTACTAT
TTCTTCGTCCAGACTATGAGTCCGCGCCAGCAACGGCTTGTGGGCTCGCA
AGTCTTGACTCCGTACATCGATCAGGGGCAGGCATGTCACGAGGCGGCGG
TACAGCGGTACGTGGCTTGGTCCTTGGAATACGAATTCCCGCAGGTCACA
GCATTTTTTATGCAGCTGGAGGAGCTGATTGTTAAAGTGGGTGCGGAGGA
CGTAAGCATTCACGTGCCCAAGGCGGCCTTGCTCAAGTTGATGCAAGAGC
CCTGTTCACGCAAGGCAGTGGCCGAAGGGTTGGCGACAGTATTTCGACGG
GTCCGCAAGCATATCAGCGACGACACCGGCTTATTCCTGCCTTTGTGGGA
TCGGATCATCGCATTGCTCTCGCAGCGATTTGTTCGGTATGAAGAGATTG
CCCTGCAGTGCTACGATGTCAGGTTAGAGCCGTCGGCCACCCTGATGCGG
CAGCTCGCGCAGGAATGCCGGTCGCTGGGAGGGAAGTAAGGAGCACTAGA
GGGGTTGGAAGGTTGAAGATCGAATGTACCACAATTGTACATACCAAATA
AATAACGATATGGCGATAGCATGGTGAGCAAGATCTTTGCTGTTCCTGCC
TTGTTGCATTCTTAGAGCCTTCTTCGGTGCCGTCATGCGTGCATGGCGGC
ATTCAAGCCGTCC back to topCoding sequence (CDS) from alignment at scaffold_18:493061..494423- >mRNA_6706 ID=mRNA_6706|Name=jgi.p|Nanoce1779_2|597773|organism=Nannochloropsis oceanica|type=CDS|length=1158bp|location=Sequence derived from alignment at scaffold_18:493061..494423- (Nannochloropsis oceanica)
ATGCCCTTGTCCTTGGCAATTGGCCTGGCACTGACACAGCTGGCGCCAAT
TGTGAAAAAAGAGCAGACATTTGTGACGGACTTGTTTAAGCTCAAGCCAA
AAGAGAACGAGGAGGACCAACGGAAACTACAGAGTGTGCTAGAGGTGGAG
TTTGATAAGCTGAGGGAGAAGCTGACGGAGCAGGCAGAAATGGCGACGGA
TGTGGACCCGTTTGAAGGGCTGGCGATTCTGGCGGTCATGACGCAGATAT
TCAGTCCACCCAATGGAAGCAGCAGCAGCTGTAATAGCAGCAGTAGTTGT
GGTGAAAAAATAAGAATGGGCGCGGCGGCCCCTGCTTTTACGGGCTTGGT
ACCTGAGGACCACTTCATGTCATTGGTCTTGCTGTCGTTGCAACAGTCCT
TGGCCACGAAATTCAATCATTTTATTTCCGAGCAAGACGCTTGGCTCAGC
CACCAGTCTCCGGACATCAAGCGCGCAGGCGTGCTGGCTCCATTTGCCAA
ATTTCCTGTCTTTGTGGACCGACTTGCGTTGGCTGTGAGGGGGCATCCGA
TCGACGTAGCTAACGCGGCGTTGCAGAAACTGTCAGTAGCGCTCTTTGCC
TGGTTAGAGCGGATCGCCCGTAAGGGAGACCCCAAATACGCCGATGTCGT
GCGGTTAGAAAATTACTATTTCTTCGTCCAGACTATGAGTCCGCGCCAGC
AACGGCTTGTGGGCTCGCAAGTCTTGACTCCGTACATCGATCAGGGGCAG
GCATGTCACGAGGCGGCGGTACAGCGGTACGTGGCTTGGTCCTTGGAATA
CGAATTCCCGCAGGTCACAGCATTTTTTATGCAGCTGGAGGAGCTGATTG
TTAAAGTGGGTGCGGAGGACGTAAGCATTCACGTGCCCAAGGCGGCCTTG
CTCAAGTTGATGCAAGAGCCCTGTTCACGCAAGGCAGTGGCCGAAGGGTT
GGCGACAGTATTTCGACGGGTCCGCAAGCATATCAGCGACGACACCGGCT
TATTCCTGCCTTTGTGGGATCGGATCATCGCATTGCTCTCGCAGCGATTT
GTTCGGTATGAAGAGATTGCCCTGCAGTGCTACGATGTCAGGTTAGAGCC
GTCGGCCACCCTGATGCGGCAGCTCGCGCAGGAATGCCGGTCGCTGGGAG
GGAAGTAA back to top
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