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Properties
Property Name | Value |
TranscriptId | 597840 |
Track | FilteredModels2 |
ProteinId | 597754 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_18 | supercontig | scaffold_18:473729..475891 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6699 ID=mRNA_6699|Name=jgi.p|Nanoce1779_2|597754|organism=Nannochloropsis oceanica|type=mRNA|length=1052bp ACAGAGACCTAGCACTTTCAGACACTCCCTATGCTAGACGAGTGGATAGA GACGCTCCAACGCGGGGAATGCATCAAGGAGCACGAACTGAAGAAGCTAT GTAGTCTGGTGAAAGAAATTCTTATCGAAGAATGCAACGTCCAACCAGTA CGGAGCCCCGTCACGGTCTGTGGGGACATCCACGGCCAGTTTTACGACCT ACTCAAGCTCTTCGCCTGCGGGGGGGAAGTGCCTGAGACGAGCTACATTT TCATGGGGGACTTTGTGGACCGAGGGCACAACAGCGTGGAAACCTTGACA TTACTGCTGTGTTTAAAGGCGCGGTATCCCCAACACATGACCTTGTTGCG CGGGAATCATGAGTCGCGGCAGATCACACAGGTGTACGGTTTCTACGAGG AGTGCATGCGCAAGTACGGCAATGCCAACGCCTGGAAATATTGCGTGGAC GTGTTTGACTACCTCAACCTGGCCGCATTGATAGATGGGCAGGTCCTGTG CGTGCATGGTGGGCTCTCTCCAGAGATTAGGACGGTGGATCAGATCCGCA CCATCGACCGTGTCCAGGAAATCCCGCACGACGGCCCATTTTGTGATATG ATGTGGAGTGACCCCGAGGACATAATTGACCCGTGGGTGATCTCGCCACG GGGTGCGGGGTATTTATTCGGAAGCAAGGTTACGCAGGCTTTCAATCACG TGAACGGCCTGGAGCTCATCTGCCGGGCACATCAACTAGTTATGGAAGGC TTCAAATACCATTTCCCCGAGCGCTCGCTCGTCACGGTCTGGTCTGCTCC CAACTACTGCTATCGATGCGGTAATGTCGCGGCTGTGCTTGCCTTTGACG AGAACCTGAACCGAGAGTTCAAGATGTTCAAGGAGGTGCCGGAGAGCAAC ATGGCGGAGGAACGGAGAAACCTCGTACCTTACTTCCTGTAAAGTCATGC AAGGATAGGGAGGAAAGAAGGAGGGACGGAGGGACGGAGGGGCGAGGACA ATGATTTTGCAAGGAGGGAGAAGTGGGGGTGGTGTGTACACAGGAGAGAT CA back to topprotein sequence of jgi.p|Nanoce1779_2|597754 >mRNA_6699-protein ID=mRNA_6699-protein|Name=jgi.p|Nanoce1779_2|597754|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp MLDEWIETLQRGECIKEHELKKLCSLVKEILIEECNVQPVRSPVTVCGDI HGQFYDLLKLFACGGEVPETSYIFMGDFVDRGHNSVETLTLLLCLKARYP QHMTLLRGNHESRQITQVYGFYEECMRKYGNANAWKYCVDVFDYLNLAAL IDGQVLCVHGGLSPEIRTVDQIRTIDRVQEIPHDGPFCDMMWSDPEDIID PWVISPRGAGYLFGSKVTQAFNHVNGLELICRAHQLVMEGFKYHFPERSL VTVWSAPNYCYRCGNVAAVLAFDENLNREFKMFKEVPESNMAEERRNLVP YFL* back to topmRNA from alignment at scaffold_18:473729..475891+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6699 ID=mRNA_6699|Name=jgi.p|Nanoce1779_2|597754|organism=Nannochloropsis oceanica|type=mRNA|length=2163bp|location=Sequence derived from alignment at scaffold_18:473729..475891+ (Nannochloropsis oceanica) ACAGAGACCTAGCACTTTCAGACACTCCCTATGCTAGACGAGTGGATAGA
GACGCTCCAACGCGGGGAATGCATCAAGGAGCACGAACTGAAGAAGCTAT
GTAGTCTGGTAAGTCCGAGCGTCTGCTTGCTTGTTGCCTTCCCGCTACTC
CCTCTGTGCCCTCGTCACCTCTGTTCGTCGTGGTCCACCACATCTGGCCT
CGTCTCCCTCCAGGCTAGTGCATACCGTGAATATCCGCTTCCTTTATATT
GTTATCCTCAGCTGCTGCACAAAGCTAACCGAAGCCTCTATCCATTGCTC
CTTCCAACCCAACATCTCCTCCCCCCCGCCTTCCCGTCATCCTTCCCTAC
ATACCCATTCTAACCCTGGCGGCTCCCTCCTCTTCTCTCCCCGCACAAAC
CCAAAACAAAGGTGAAAGAAATTCTTATCGAAGAATGCAACGTCCAACCA
GTACGGAGCCCCGTCACGGTCTGTGGGGACATCCACGGCCAGTTTTACGA
CCTACTCAAGCTCTTCGCCTGCGGGGGGGAAGTGCCTGAGACGAGCTACA
TTTTCATGGGGGACTTTGTGGACCGAGGGCACAACAGCGTGGAAACCTTG
ACATTACTGCTGTGTTTAAAGGCGCGGTATCCCCAACACATGACCTTGTT
GCGCGGGAATCATGAGTCGCGGCAGATCACACAGGTAAAGGGGGAGGGGG
GCGGGAGGGATGGAAAGGACGCTGTTTTTTTGTGCGAAATGTGGACATAT
GTCGGTACGATAATTTCCGAATCCATTTCTCCATTCCTCCCTCCTTTCCC
CCCCCCCCCTCCAGGTGTACGGTTTCTACGAGGAGTGCATGCGCAAGTAC
GGCAATGCCAACGCCTGGAAATATTGCGTGGACGTGTTTGACTACCTCAA
CCTGGCCGCATTGATAGATGGGCAGGTCCTGTGCGTGCATGGTGGGCTCT
CTCCAGAGATTAGGACGGTGGATCAGGTATAAGCCTTGCCCTTAACCCTC
CCGCCCTTCATTGACTCCCTTCCTTCTTCTGGTCTTGTCTTTTTCCTTCT
TTATCTCACCTCAGCCCACACACCTTGCCAGTTCTCTCTTTCGCCACGTA
TCTCTCTTGATTTTTCATGACTTTCGATCAACAACATGCGCCTTTCCCCT
CCTGGTTGCTCAATACATCTCAATATATCCTCTCTTCCCGCATTTACTCC
CGCTCTCGTTCAGATCCGCACCATCGACCGTGTCCAGGAAATCCCGCACG
ACGGCCCATTTTGTGATATGATGTGGAGTGACCCCGAGGACATAATTGAC
CCGTGGGTGATCTCGCCACGGTGAGGGAGGGAGGGAAGGGAGGGAGAAAA
GGAGGGAAGGAGGGGCATGGATGGCTGGAGGTCCACGACCTGTGTAATAA
AAGAGGAAGGAGGAGAAAAGAGGACAAAGATCATCACTAGAGCTCATGGT
GTTTGTCGTCCTTCCGTTCATGTTTCTGATTACCCTTCTATCCAGGGGTG
CGGGGTATTTATTCGGAAGCAAGGTTACGCAGGCTTTCAATCACGTGAAC
GGCCTGGAGCTCATCTGCCGGGCACATCAACTAGTTATGGAAGGTGAGTA
GCCTCCACCTCCCATCTAATTTCCTCCTTTCTTCCCTTTCTCCCTCCATT
CATTTTTTCTGGTTGACTCGTTGCAGCGTGATAACGATAGTTACCCCTGT
AATCCCGGCATCTGATCGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCGCAGGCTTCAAATACCATTTCCCCGAGCGCTC
GCTCGTCACGGTCTGGTCTGCTCCCAACTACTGCTATCGATGCGGTAATG
TCGCGGCTGTGCTTGCCTTTGACGAGAACCTGAACCGAGAGTTCAAGATG
TTCAAGGGTAAGGAGGGAGGGAGAGAGACTTATTACCGTTTTTTCGATCG
GTCGCCTCACTCTTTCCTTCCCTCCCTACCTCCCTTTCCTACAGAGGTGC
CGGAGAGCAACATGGCGGAGGAACGGAGAAACCTCGTACCTTACTTCCTG
TAAAGTCATGCAAGGATAGGGAGGAAAGAAGGAGGGACGGAGGGACGGAG
GGGCGAGGACAATGATTTTGCAAGGAGGGAGAAGTGGGGGTGGTGTGTAC
ACAGGAGAGATCA back to topCoding sequence (CDS) from alignment at scaffold_18:473729..475891+ >mRNA_6699 ID=mRNA_6699|Name=jgi.p|Nanoce1779_2|597754|organism=Nannochloropsis oceanica|type=CDS|length=6384bp|location=Sequence derived from alignment at scaffold_18:473729..475891+ (Nannochloropsis oceanica) ATGCTAGACGAGTGGATAGAGACGCTCCAACGCGGGGAATGCATCAAGGA GCACGAACTGAAGAAGCTATGTAGTCTGGTGAAAGAAATTCTTATCGAAG AATGCAACGTCCAACCAGTACGGAGCCCCGTCACGGTCTGTGGGGACATC CACGGCCAGTTTTACGACCTACTCAAGCTCTTCGCCTGCGGGGGGGAAGT GCCTGAGACGAGCTACATTTTCATGGGGGACTTTGTGGACCGAGGGCACA ACAGCGTGGAAACCTTGACATTACTGCTGTGTTTAAAGGCGCGGTATCCC CAACACATGACCTTGTTGCGCGGGAATCATGAGTCGCGGCAGATCACACA GGTGTACGGTTTCTACGAGGAGTGCATGCGCAAGTACGGCAATGCCAACG CCTGGAAATATTGCGTGGACGTGTTTGACTACCTCAACCTGGCCGCATTG ATAGATGGGCAGGTCCTGTGCGTGCATGGTGGGCTCTCTCCAGAGATTAG GACGGTGGATCAGATCCGCACCATCGACCGTGTCCAGGAAATCCCGCACG ACGGCCCATTTTGTGATATGATGTGGAGTGACCCCGAGGACATAATTGAC CCGTGGGTGATCTCGCCACGGGGTGCGGGGTATTTATTCGGAAGCAAGGT TACGCAGGCTTTCAATCACGTGAACGGCCTGGAGCTCATCTGCCGGGCAC ATCAACTAGTTATGGAAGGCTTCAAATACCATTTCCCCGAGCGCTCGCTC GTCACGGTCTGGTCTGCTCCCAACTACTGCTATCGATGCGGTAATGTCGC GGCTGTGCTTGCCTTTGACGAGAACCTGAACCGAGAGTTCAAGATGTTCA AGGAGGTGCCGGAGAGCAACATGGCGGAGGAACGGAGAAACCTCGTACCT TACTTCCTGTAAATGCTAGACGAGTGGATAGAGACGCTCCAACGCGGGGA ATGCATCAAGGAGCACGAACTGAAGAAGCTATGTAGTCTGGTGAAAGAAA TTCTTATCGAAGAATGCAACGTCCAACCAGTACGGAGCCCCGTCACGGTC TGTGGGGACATCCACGGCCAGTTTTACGACCTACTCAAGCTCTTCGCCTG CGGGGGGGAAGTGCCTGAGACGAGCTACATTTTCATGGGGGACTTTGTGG ACCGAGGGCACAACAGCGTGGAAACCTTGACATTACTGCTGTGTTTAAAG GCGCGGTATCCCCAACACATGACCTTGTTGCGCGGGAATCATGAGTCGCG GCAGATCACACAGGTGTACGGTTTCTACGAGGAGTGCATGCGCAAGTACG GCAATGCCAACGCCTGGAAATATTGCGTGGACGTGTTTGACTACCTCAAC CTGGCCGCATTGATAGATGGGCAGGTCCTGTGCGTGCATGGTGGGCTCTC TCCAGAGATTAGGACGGTGGATCAGATCCGCACCATCGACCGTGTCCAGG AAATCCCGCACGACGGCCCATTTTGTGATATGATGTGGAGTGACCCCGAG GACATAATTGACCCGTGGGTGATCTCGCCACGGGGTGCGGGGTATTTATT CGGAAGCAAGGTTACGCAGGCTTTCAATCACGTGAACGGCCTGGAGCTCA TCTGCCGGGCACATCAACTAGTTATGGAAGGCTTCAAATACCATTTCCCC GAGCGCTCGCTCGTCACGGTCTGGTCTGCTCCCAACTACTGCTATCGATG CGGTAATGTCGCGGCTGTGCTTGCCTTTGACGAGAACCTGAACCGAGAGT TCAAGATGTTCAAGGAGGTGCCGGAGAGCAACATGGCGGAGGAACGGAGA AACCTCGTACCTTACTTCCTGTAAATGCTAGACGAGTGGATAGAGACGCT CCAACGCGGGGAATGCATCAAGGAGCACGAACTGAAGAAGCTATGTAGTC TGGTGAAAGAAATTCTTATCGAAGAATGCAACGTCCAACCAGTACGGAGC CCCGTCACGGTCTGTGGGGACATCCACGGCCAGTTTTACGACCTACTCAA GCTCTTCGCCTGCGGGGGGGAAGTGCCTGAGACGAGCTACATTTTCATGG GGGACTTTGTGGACCGAGGGCACAACAGCGTGGAAACCTTGACATTACTG CTGTGTTTAAAGGCGCGGTATCCCCAACACATGACCTTGTTGCGCGGGAA TCATGAGTCGCGGCAGATCACACAGGTGTACGGTTTCTACGAGGAGTGCA TGCGCAAGTACGGCAATGCCAACGCCTGGAAATATTGCGTGGACGTGTTT GACTACCTCAACCTGGCCGCATTGATAGATGGGCAGGTCCTGTGCGTGCA TGGTGGGCTCTCTCCAGAGATTAGGACGGTGGATCAGATCCGCACCATCG ACCGTGTCCAGGAAATCCCGCACGACGGCCCATTTTGTGATATGATGTGG AGTGACCCCGAGGACATAATTGACCCGTGGGTGATCTCGCCACGGGGTGC GGGGTATTTATTCGGAAGCAAGGTTACGCAGGCTTTCAATCACGTGAACG GCCTGGAGCTCATCTGCCGGGCACATCAACTAGTTATGGAAGGCTTCAAA TACCATTTCCCCGAGCGCTCGCTCGTCACGGTCTGGTCTGCTCCCAACTA CTGCTATCGATGCGGTAATGTCGCGGCTGTGCTTGCCTTTGACGAGAACC TGAACCGAGAGTTCAAGATGTTCAAGGAGGTGCCGGAGAGCAACATGGCG GAGGAACGGAGAAACCTCGTACCTTACTTCCTGTAAATGCTAGACGAGTG GATAGAGACGCTCCAACGCGGGGAATGCATCAAGGAGCACGAACTGAAGA AGCTATGTAGTCTGGTGAAAGAAATTCTTATCGAAGAATGCAACGTCCAA CCAGTACGGAGCCCCGTCACGGTCTGTGGGGACATCCACGGCCAGTTTTA CGACCTACTCAAGCTCTTCGCCTGCGGGGGGGAAGTGCCTGAGACGAGCT ACATTTTCATGGGGGACTTTGTGGACCGAGGGCACAACAGCGTGGAAACC TTGACATTACTGCTGTGTTTAAAGGCGCGGTATCCCCAACACATGACCTT GTTGCGCGGGAATCATGAGTCGCGGCAGATCACACAGGTGTACGGTTTCT ACGAGGAGTGCATGCGCAAGTACGGCAATGCCAACGCCTGGAAATATTGC GTGGACGTGTTTGACTACCTCAACCTGGCCGCATTGATAGATGGGCAGGT CCTGTGCGTGCATGGTGGGCTCTCTCCAGAGATTAGGACGGTGGATCAGA TCCGCACCATCGACCGTGTCCAGGAAATCCCGCACGACGGCCCATTTTGT GATATGATGTGGAGTGACCCCGAGGACATAATTGACCCGTGGGTGATCTC GCCACGGGGTGCGGGGTATTTATTCGGAAGCAAGGTTACGCAGGCTTTCA ATCACGTGAACGGCCTGGAGCTCATCTGCCGGGCACATCAACTAGTTATG GAAGGCTTCAAATACCATTTCCCCGAGCGCTCGCTCGTCACGGTCTGGTC TGCTCCCAACTACTGCTATCGATGCGGTAATGTCGCGGCTGTGCTTGCCT TTGACGAGAACCTGAACCGAGAGTTCAAGATGTTCAAGGAGGTGCCGGAG AGCAACATGGCGGAGGAACGGAGAAACCTCGTACCTTACTTCCTGTAAAT GCTAGACGAGTGGATAGAGACGCTCCAACGCGGGGAATGCATCAAGGAGC ACGAACTGAAGAAGCTATGTAGTCTGGTGAAAGAAATTCTTATCGAAGAA TGCAACGTCCAACCAGTACGGAGCCCCGTCACGGTCTGTGGGGACATCCA CGGCCAGTTTTACGACCTACTCAAGCTCTTCGCCTGCGGGGGGGAAGTGC CTGAGACGAGCTACATTTTCATGGGGGACTTTGTGGACCGAGGGCACAAC AGCGTGGAAACCTTGACATTACTGCTGTGTTTAAAGGCGCGGTATCCCCA ACACATGACCTTGTTGCGCGGGAATCATGAGTCGCGGCAGATCACACAGG TGTACGGTTTCTACGAGGAGTGCATGCGCAAGTACGGCAATGCCAACGCC TGGAAATATTGCGTGGACGTGTTTGACTACCTCAACCTGGCCGCATTGAT AGATGGGCAGGTCCTGTGCGTGCATGGTGGGCTCTCTCCAGAGATTAGGA CGGTGGATCAGATCCGCACCATCGACCGTGTCCAGGAAATCCCGCACGAC GGCCCATTTTGTGATATGATGTGGAGTGACCCCGAGGACATAATTGACCC GTGGGTGATCTCGCCACGGGGTGCGGGGTATTTATTCGGAAGCAAGGTTA CGCAGGCTTTCAATCACGTGAACGGCCTGGAGCTCATCTGCCGGGCACAT CAACTAGTTATGGAAGGCTTCAAATACCATTTCCCCGAGCGCTCGCTCGT CACGGTCTGGTCTGCTCCCAACTACTGCTATCGATGCGGTAATGTCGCGG CTGTGCTTGCCTTTGACGAGAACCTGAACCGAGAGTTCAAGATGTTCAAG GAGGTGCCGGAGAGCAACATGGCGGAGGAACGGAGAAACCTCGTACCTTA CTTCCTGTAAATGCTAGACGAGTGGATAGAGACGCTCCAACGCGGGGAAT GCATCAAGGAGCACGAACTGAAGAAGCTATGTAGTCTGGTGAAAGAAATT CTTATCGAAGAATGCAACGTCCAACCAGTACGGAGCCCCGTCACGGTCTG TGGGGACATCCACGGCCAGTTTTACGACCTACTCAAGCTCTTCGCCTGCG GGGGGGAAGTGCCTGAGACGAGCTACATTTTCATGGGGGACTTTGTGGAC CGAGGGCACAACAGCGTGGAAACCTTGACATTACTGCTGTGTTTAAAGGC GCGGTATCCCCAACACATGACCTTGTTGCGCGGGAATCATGAGTCGCGGC AGATCACACAGGTGTACGGTTTCTACGAGGAGTGCATGCGCAAGTACGGC AATGCCAACGCCTGGAAATATTGCGTGGACGTGTTTGACTACCTCAACCT GGCCGCATTGATAGATGGGCAGGTCCTGTGCGTGCATGGTGGGCTCTCTC CAGAGATTAGGACGGTGGATCAGATCCGCACCATCGACCGTGTCCAGGAA ATCCCGCACGACGGCCCATTTTGTGATATGATGTGGAGTGACCCCGAGGA CATAATTGACCCGTGGGTGATCTCGCCACGGGGTGCGGGGTATTTATTCG GAAGCAAGGTTACGCAGGCTTTCAATCACGTGAACGGCCTGGAGCTCATC TGCCGGGCACATCAACTAGTTATGGAAGGCTTCAAATACCATTTCCCCGA GCGCTCGCTCGTCACGGTCTGGTCTGCTCCCAACTACTGCTATCGATGCG GTAATGTCGCGGCTGTGCTTGCCTTTGACGAGAACCTGAACCGAGAGTTC AAGATGTTCAAGGAGGTGCCGGAGAGCAACATGGCGGAGGAACGGAGAAA CCTCGTACCTTACTTCCTGTAAATGCTAGACGAGTGGATAGAGACGCTCC AACGCGGGGAATGCATCAAGGAGCACGAACTGAAGAAGCTATGTAGTCTG GTGAAAGAAATTCTTATCGAAGAATGCAACGTCCAACCAGTACGGAGCCC CGTCACGGTCTGTGGGGACATCCACGGCCAGTTTTACGACCTACTCAAGC TCTTCGCCTGCGGGGGGGAAGTGCCTGAGACGAGCTACATTTTCATGGGG GACTTTGTGGACCGAGGGCACAACAGCGTGGAAACCTTGACATTACTGCT GTGTTTAAAGGCGCGGTATCCCCAACACATGACCTTGTTGCGCGGGAATC ATGAGTCGCGGCAGATCACACAGGTGTACGGTTTCTACGAGGAGTGCATG CGCAAGTACGGCAATGCCAACGCCTGGAAATATTGCGTGGACGTGTTTGA CTACCTCAACCTGGCCGCATTGATAGATGGGCAGGTCCTGTGCGTGCATG GTGGGCTCTCTCCAGAGATTAGGACGGTGGATCAGATCCGCACCATCGAC CGTGTCCAGGAAATCCCGCACGACGGCCCATTTTGTGATATGATGTGGAG TGACCCCGAGGACATAATTGACCCGTGGGTGATCTCGCCACGGGGTGCGG GGTATTTATTCGGAAGCAAGGTTACGCAGGCTTTCAATCACGTGAACGGC CTGGAGCTCATCTGCCGGGCACATCAACTAGTTATGGAAGGCTTCAAATA CCATTTCCCCGAGCGCTCGCTCGTCACGGTCTGGTCTGCTCCCAACTACT GCTATCGATGCGGTAATGTCGCGGCTGTGCTTGCCTTTGACGAGAACCTG AACCGAGAGTTCAAGATGTTCAAGGAGGTGCCGGAGAGCAACATGGCGGA GGAACGGAGAAACCTCGTACCTTACTTCCTGTAA back to top
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