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Properties
| Property Name | Value |
|---|
| TranscriptId | 627195 |
| Track | FilteredModels2 |
| ProteinId | 627109 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:147420..148528 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_667 ID=mRNA_667|Name=jgi.p|Nanoce1779_2|627109|organism=Nannochloropsis oceanica|type=mRNA|length=615bp
GTTCTTACCCTCCCCTCCATCAACGCCTTGCCGTTGGAAGGCCGCATCCT
TCTTGTGACTAATGAAGCTCCGGCCCCTACAAAAGTCATCTTGAGCGGGG
GGATGTATGCCACGCTCACGACCGCGGATGGGAGCTTCCGTTTTGCCGAC
GTGCCAGCAGGTACATATTTGCTCGATGTCCTTTCGCCCGAGTATTACTT
CAGTCAGATCAAAATCAGCGTCCGCCCCGACATGGAGGACGATGCTGGCA
AAATATTGTGCCTGGAGTACAAGTACCCTGGGGCCCCCAAGATAAAGGCT
TCCTACCCCCTCCTCCTACATGCCCACAGCGAGTACGACTACTTTGAGAA
ACGTGATGCTTGGGCAAGCCTGAGAGCCCAATTGATGTCGCCAATGACCT
GGATGTTATTTGTAAGTGTGGCCGCCGCGTTCTTTCTCCCAAAGGCGATG
GATTCCATGAGTGAGGACGAGAAGAAAGCCTTGGAAGAGCAGATGAAGAC
CACAAACCCCACGGCCATGCTCCAGGACCTGATGGGTGGTGGCGGTGGTG
CTGGGACCGGGGCGGGGGTTGGGGGAGGAGGGAGTGGGAAAAAGAAAGTC
GGAGGGGGACGATGA back to topprotein sequence of jgi.p|Nanoce1779_2|627109 >mRNA_667-protein ID=mRNA_667-protein|Name=jgi.p|Nanoce1779_2|627109|organism=Nannochloropsis oceanica|type=polypeptide|length=171bp
MYATLTTADGSFRFADVPAGTYLLDVLSPEYYFSQIKISVRPDMEDDAGK
ILCLEYKYPGAPKIKASYPLLLHAHSEYDYFEKRDAWASLRAQLMSPMTW
MLFVSVAAAFFLPKAMDSMSEDEKKALEEQMKTTNPTAMLQDLMGGGGGA
GTGAGVGGGGSGKKKVGGGR* back to topmRNA from alignment at scaffold_2:147420..148528- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_667 ID=mRNA_667|Name=jgi.p|Nanoce1779_2|627109|organism=Nannochloropsis oceanica|type=mRNA|length=1109bp|location=Sequence derived from alignment at scaffold_2:147420..148528- (Nannochloropsis oceanica)
GTTCTTACCCTCCCCTCCATCAACGCCTTGCCGTTGGAAGGCCGCATCCT
TCTTGTGACTAATGAAGCTCCGGCCCCTACAAAAGTCATCTTGAGCGGGG
GGATGTATGCCACGCTCACGACCGCGGATGGGAGCTTCCGTTTTGCCGAC
GTGCCAGCAGGTAAAGAGGAGAATGGGAAAGCAGAAAGTGTAGAACGGGC
CAAGAACACATGTGCGGAGGAACAATGTATGGATAGAAAGGCTTGTAGTA
TGGAACGAAAATTGAATGGTGCTGTCGTCTCATGTAACTTTCTTTCCAAC
AATCAAAAATCCACACGTACAGGTACATATTTGCTCGATGTCCTTTCGCC
CGAGTATTACTTCAGTCAGGTACCTTAATTATTTTCGTTTTTAACATCAC
CGATAAGCGCACAGCAGCTTCTTCACCCTCGTTCATTTCGCGCCTATACC
AAATCCAGATCAAAATCAGCGTCCGCCCCGACATGGAGGACGATGCTGGC
AAAATATTGTGCCTGGAGTACAAGTACCCTGGTACGTGTTGCTTTCCGCT
GGCGAAGCCTTTTATCTTCATGTGAAAGTTTTTATCTTTCATTTATTTTC
TCTCTTTTCTTCCGTATTTTATCTCTTGTCTTCCGTAAACGCGGAGACGT
GCTTTTGAAGGAGAGACTGTAAGGAGGCCGAAAATGCATTGGCTCACCCG
TCCTTGCTCCGATCTGCCCCTTCTTCCCTCCCTCCCTCCCTCCCTTCTCC
GTCTTTTCCGTCAATGAATCACAGGGGCCCCCAAGATAAAGGCTTCCTAC
CCCCTCCTCCTACATGCCCACAGCGAGTACGACTACTTTGAGAAACGTGA
TGCTTGGGCAAGCCTGAGAGCCCAATTGATGTCGCCAATGACCTGGATGT
TATTTGTAAGTGTGGCCGCCGCGTTCTTTCTCCCAAAGGCGATGGATTCC
ATGAGTGAGGACGAGAAGAAAGCCTTGGAAGAGCAGATGAAGACCACAAA
CCCCACGGCCATGCTCCAGGACCTGATGGGTGGTGGCGGTGGTGCTGGGA
CCGGGGCGGGGGTTGGGGGAGGAGGGAGTGGGAAAAAGAAAGTCGGAGGG
GGACGATGA back to topCoding sequence (CDS) from alignment at scaffold_2:147420..148528- >mRNA_667 ID=mRNA_667|Name=jgi.p|Nanoce1779_2|627109|organism=Nannochloropsis oceanica|type=CDS|length=2052bp|location=Sequence derived from alignment at scaffold_2:147420..148528- (Nannochloropsis oceanica)
GGGCCCCCAAGATAAAGGCTTCCTACCCCCTCCTCCTACATGCCCACAGC
GAGTACGACTACTTTGAGAAACGTGATGCTTGGGCAAGCCTGAGAGCCCA
ATTGATGTCGCCAATGACCTGGATGTTATTTGTAAGTGTGGCCGCCGCGT
TCTTTCTCCCAAAGGCGATGGATTCCATGAGTGAGGACGAGAAGAAAGCC
TTGGAAGAGCAGATGAAGACCACAAACCCCACGGCCATGCTCCAGGACCT
GATGGGTGGTGGCGGTGGTGCTGGGACCGGGGCGGGGGTTGGGGGAGGAG
GGAGTGGGAAAAAGAAAGTCGGAGGGGGACGATGAATCAAAATCAGCGTC
CGCCCCGACATGGAGGACGATGCTGGCAAAATATTGTGCCTGGAGTACAA
GTACCCTGGTACATATTTGCTCGATGTCCTTTCGCCCGAGTATTACTTCA
GTCAGATGTATGCCACGCTCACGACCGCGGATGGGAGCTTCCGTTTTGCC
GACGTGCCAGCAGGGGCCCCCAAGATAAAGGCTTCCTACCCCCTCCTCCT
ACATGCCCACAGCGAGTACGACTACTTTGAGAAACGTGATGCTTGGGCAA
GCCTGAGAGCCCAATTGATGTCGCCAATGACCTGGATGTTATTTGTAAGT
GTGGCCGCCGCGTTCTTTCTCCCAAAGGCGATGGATTCCATGAGTGAGGA
CGAGAAGAAAGCCTTGGAAGAGCAGATGAAGACCACAAACCCCACGGCCA
TGCTCCAGGACCTGATGGGTGGTGGCGGTGGTGCTGGGACCGGGGCGGGG
GTTGGGGGAGGAGGGAGTGGGAAAAAGAAAGTCGGAGGGGGACGATGAAT
CAAAATCAGCGTCCGCCCCGACATGGAGGACGATGCTGGCAAAATATTGT
GCCTGGAGTACAAGTACCCTGGTACATATTTGCTCGATGTCCTTTCGCCC
GAGTATTACTTCAGTCAGATGTATGCCACGCTCACGACCGCGGATGGGAG
CTTCCGTTTTGCCGACGTGCCAGCAGGGGCCCCCAAGATAAAGGCTTCCT
ACCCCCTCCTCCTACATGCCCACAGCGAGTACGACTACTTTGAGAAACGT
GATGCTTGGGCAAGCCTGAGAGCCCAATTGATGTCGCCAATGACCTGGAT
GTTATTTGTAAGTGTGGCCGCCGCGTTCTTTCTCCCAAAGGCGATGGATT
CCATGAGTGAGGACGAGAAGAAAGCCTTGGAAGAGCAGATGAAGACCACA
AACCCCACGGCCATGCTCCAGGACCTGATGGGTGGTGGCGGTGGTGCTGG
GACCGGGGCGGGGGTTGGGGGAGGAGGGAGTGGGAAAAAGAAAGTCGGAG
GGGGACGATGAATCAAAATCAGCGTCCGCCCCGACATGGAGGACGATGCT
GGCAAAATATTGTGCCTGGAGTACAAGTACCCTGGTACATATTTGCTCGA
TGTCCTTTCGCCCGAGTATTACTTCAGTCAGATGTATGCCACGCTCACGA
CCGCGGATGGGAGCTTCCGTTTTGCCGACGTGCCAGCAGGGGCCCCCAAG
ATAAAGGCTTCCTACCCCCTCCTCCTACATGCCCACAGCGAGTACGACTA
CTTTGAGAAACGTGATGCTTGGGCAAGCCTGAGAGCCCAATTGATGTCGC
CAATGACCTGGATGTTATTTGTAAGTGTGGCCGCCGCGTTCTTTCTCCCA
AAGGCGATGGATTCCATGAGTGAGGACGAGAAGAAAGCCTTGGAAGAGCA
GATGAAGACCACAAACCCCACGGCCATGCTCCAGGACCTGATGGGTGGTG
GCGGTGGTGCTGGGACCGGGGCGGGGGTTGGGGGAGGAGGGAGTGGGAAA
AAGAAAGTCGGAGGGGGACGATGAATCAAAATCAGCGTCCGCCCCGACAT
GGAGGACGATGCTGGCAAAATATTGTGCCTGGAGTACAAGTACCCTGGTA
CATATTTGCTCGATGTCCTTTCGCCCGAGTATTACTTCAGTCAGATGTAT
GCCACGCTCACGACCGCGGATGGGAGCTTCCGTTTTGCCGACGTGCCAGC
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