Properties
| Property Name | Value |
|---|
| TranscriptId | 597692 |
| Track | FilteredModels2 |
| ProteinId | 597606 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:361606..362877 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6649 ID=mRNA_6649|Name=jgi.p|Nanoce1779_2|597606|organism=Nannochloropsis oceanica|type=mRNA|length=988bp
ACAGGAGCCAAGCCCCCCATCCCCCCCCGGCAGAGTAAAGTCAGCCAGCC
AAGGCCAAAGCGTCATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGG
GCCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATT
GGACACAGAATTCAGCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCT
GTGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCG
AATAGCACGTTGGGAAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGC
CGTGGACTTGCAAGAGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAG
GAGACATCACCTTGCAGATAACGGCCGACACTATCATCGGACACTTTGGC
GGGGAACGGGTGGACCTGGTGGTGTGTGACGGCGCCCCAGACGTGACGGG
CCTACACGATATGGACGAATTCCTTCAAGCCCAACTCATGTTTGCCGCAC
TCACCATCACTACACATGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAG
GTTTTTAGAGGACGTGATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTT
TTTTGAGAGTGTGACAGTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAA
GTGAGTGTTTTGTGGTGTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCAT
GGCTACATCCCCCAGATGGTCGTGTCAACTTCTACTACCACCGCAACTAC
GACGGGGGGAGAGGAGAGGAGAGCACAAGATCCAGCGTATGGCGGAAGCG
CGTCGGGAAGGATGGTGGGGCCCTACGTGGAACGGGGGGATTTGTCGGGT
TTCGAGGTAGCAGCAGCCACCACGTCTTGACATTCGAATAGTGGGGGATA
TAGCATTTATTCCAAATGTGTATTTTAGAAGTAAGAAGGGTGGTGTACAA
ATAAATAGTAAACCAGAAATATCACTACTGACCTGTAT back to topprotein sequence of jgi.p|Nanoce1779_2|597606 >mRNA_6649-protein ID=mRNA_6649-protein|Name=jgi.p|Nanoce1779_2|597606|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp
MGKVVRDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPG
SWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITL
QITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITT
HVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFV
VCEGFLGPVPEHGYIPQMVVSTSTTTATTTGGEERRAQDPAYGGSASGRM
VGPYVERGDLSGFEVAAATTS* back to topmRNA from alignment at scaffold_18:361606..362877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6649 ID=mRNA_6649|Name=jgi.p|Nanoce1779_2|597606|organism=Nannochloropsis oceanica|type=mRNA|length=1272bp|location=Sequence derived from alignment at scaffold_18:361606..362877- (Nannochloropsis oceanica)
ACAGGAGCCAAGCCCCCCATCCCCCCCCGGCAGAGTAAAGTCAGCCAGCC
AAGGCCAAAGCGTCATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGG
GCCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATT
GGACACAGAATTCAGCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCT
GTGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCG
AATAGCACGTTGGGAAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGC
CGTGGACTTGCAAGAGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAG
GAGACATCACCTTGCAGGTGAGGGAGAGGGGAGGAAAGTGCGCTCGGTGT
GGAGGTAGGCAAATGAAGGGGGAAGAGGTAGAGAGAGGGCCCGGCTCTGG
CACTATATTAGCATTTGCACGATATTGTTTTGAATGAATTAATTTGCGCA
TGGAATAGCAAGGCTAGAGGAGTGGAGGGGGCGAGAAAGCGCTGTTGGAT
GCGGTGTACGTGTCGTGAATGAACCCACCTCCTCTACGCATCAATCCCTT
AATAATGTTTTCCTTCCTTTTTTCTCACTCCTCTCCGACACCACCATATA
GATAACGGCCGACACTATCATCGGACACTTTGGCGGGGAACGGGTGGACC
TGGTGGTGTGTGACGGCGCCCCAGACGTGACGGGCCTACACGATATGGAC
GAATTCCTTCAAGCCCAACTCATGTTTGCCGCACTCACCATCACTACACA
TGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAGGTTTTTAGAGGACGTG
ATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTTTTTTGAGAGTGTGACA
GTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAAGTGAGTGTTTTGTGGT
GTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCATGGCTACATCCCCCAGA
TGGTCGTGTCAACTTCTACTACCACCGCAACTACGACGGGGGGAGAGGAG
AGGAGAGCACAAGATCCAGCGTATGGCGGAAGCGCGTCGGGAAGGATGGT
GGGGCCCTACGTGGAACGGGGGGATTTGTCGGGTTTCGAGGTAGCAGCAG
CCACCACGTCTTGACATTCGAATAGTGGGGGATATAGCATTTATTCCAAA
TGTGTATTTTAGAAGTAAGAAGGGTGGTGTACAAATAAATAGTAAACCAG
AAATATCACTACTGACCTGTAT back to topCoding sequence (CDS) from alignment at scaffold_18:361606..362877- >mRNA_6649 ID=mRNA_6649|Name=jgi.p|Nanoce1779_2|597606|organism=Nannochloropsis oceanica|type=CDS|length=1632bp|location=Sequence derived from alignment at scaffold_18:361606..362877- (Nannochloropsis oceanica)
ATAACGGCCGACACTATCATCGGACACTTTGGCGGGGAACGGGTGGACCT
GGTGGTGTGTGACGGCGCCCCAGACGTGACGGGCCTACACGATATGGACG
AATTCCTTCAAGCCCAACTCATGTTTGCCGCACTCACCATCACTACACAT
GTTCTCAAAAATGGAGGCAAATTTGTCGCCAAGGTTTTTAGAGGACGTGA
TCTGACCCTGCTGGCGGCGCAATTGCGTCTGTTTTTTGAGAGTGTGACAG
TTGCAAAACCAGCGAGTAGTCGCGCCAATTCAAGTGAGTGTTTTGTGGTG
TGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCATGGCTACATCCCCCAGAT
GGTCGTGTCAACTTCTACTACCACCGCAACTACGACGGGGGGAGAGGAGA
GGAGAGCACAAGATCCAGCGTATGGCGGAAGCGCGTCGGGAAGGATGGTG
GGGCCCTACGTGGAACGGGGGGATTTGTCGGGTTTCGAGGTAGCAGCAGC
CACCACGTCTTGAATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGGG
CCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATTG
GACACAGAATTCAGCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCTG
TGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCGA
ATAGCACGTTGGGAAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGCC
GTGGACTTGCAAGAGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAGG
AGACATCACCTTGCAGATAACGGCCGACACTATCATCGGACACTTTGGCG
GGGAACGGGTGGACCTGGTGGTGTGTGACGGCGCCCCAGACGTGACGGGC
CTACACGATATGGACGAATTCCTTCAAGCCCAACTCATGTTTGCCGCACT
CACCATCACTACACATGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAGG
TTTTTAGAGGACGTGATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTTT
TTTGAGAGTGTGACAGTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAAG
TGAGTGTTTTGTGGTGTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCATG
GCTACATCCCCCAGATGGTCGTGTCAACTTCTACTACCACCGCAACTACG
ACGGGGGGAGAGGAGAGGAGAGCACAAGATCCAGCGTATGGCGGAAGCGC
GTCGGGAAGGATGGTGGGGCCCTACGTGGAACGGGGGGATTTGTCGGGTT
TCGAGGTAGCAGCAGCCACCACGTCTTGAATGGGCAAGGTGGTGCGGGAT
CTGTATTACCGCAGGGCCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTT
CAAGCTGCTGCAATTGGACACAGAATTCAGCCTCTTTCAAGGCGTACAAA
AGGCAGTGGACCTCTGTGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCC
ACACGGCTCTACCCGAATAGCACGTTGGGAAAGGAGATCGAGGGGGAACG
GGAGCGGATCGTTGCCGTGGACTTGCAAGAGATGGCGCCGATTCCCGGCG
TGCGGCAGCTGCAAGGAGACATCACCTTGCAG back to top
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