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Properties
| Property Name | Value |
|---|
| TranscriptId | 651755 |
| Track | FilteredModels2 |
| ProteinId | 651669 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:319453..322672 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6632 ID=mRNA_6632|Name=jgi.p|Nanoce1779_2|651669|organism=Nannochloropsis oceanica|type=mRNA|length=3220bp
TGACCACTCCGAACACAGGCCCTCATACCATACGGGCACAGGGGAGGGTG
AAAGCCGGACCAGTGCTTGCCTGCATCAGTGCATAGGAAGCACTTTCAAG
AAGCTATGTATTCTCCCTGCTTTCCCCTGTCCACCAGTGACGGTGGCATT
GGTGGCGCAAGCAGCAGCAATAGCAGCAGAGTAAACATGCCACCGCGACC
ACAGCAGTACCATCCCCTGCAAGGGAACCATAGATATCTACTCAACACCA
CCACAACATCAATCATCACAAAAATCTCCGGAGGAGGGGCAGGAGGAGAG
GCAGGAGGAAGAGGAGGCCCAGCCAAACGCGCCCGCCTCGACACAGCAGC
TGTAAGCCGCCCGACCCTCCTTAGGCCGCCTCTGCATCATCCGGGGCGGG
AGTGGGAGGCCGCCATGGCTATGGAGGCCGTGCATCAAGTGAGGTTATTG
GACAAATGCCAGCGGACATTGACGGCATTGCCTGATCGCTTGGAAGAGGC
TCTGATGGGGCCGCGGCGGCGGCGACGACGACGACGACGACAACAACGGG
CACTGGGGGAAAAAGAGGAGAAAGATGAGGAGAGGACGAGGAAGAGAGGC
AGCAGTGGTAGTGATCACATGCTGCTGGATGAAGAGATAGAGCTAGCCCT
CTTCGCCGTACACGACACGAGCTCCTTCCACGTCCCTGCGGTAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTACCGACAGCCTCCAGTCCA
TCGCAGTGGATGGTTGAAGATGGCATCATGAGGGCCAAGCAGGGCCTAGA
GGAATTGAGGCAGGAAGTGTGTGAGAGGCCATTGCGAGGTCATCACGTAG
AGGAGCAGATTGGAGAGAAGAAGGGAGAAACAGGAGGAGAATCGATGGTC
GAAAAAGGTATGAATAAGAGGAAAGGAATTAGGGAGGACGAAAAGCAGGA
GGAACTGGAGGGGAAGAAGGGAGAAGGAATTTTGATGGCGGAGGAAGAAC
AGAGACAGGGAGTAGAGGAGGAGCAGCAGGAGGAGGAGAGCGTTGTTGAA
ATTTTTGATGATGACAAGGGTGGGAAGGAGGAGGAAACTGAAGAGGATGG
AGAGGAGGAAGAGGAGGAAGGAGAAGGGTTTGAGGTGCGTCTAGAGGAGG
AAGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATGATGAGGAGGTA
GGAGGGGACGAGCAGGTAGAGGAGAAGAGTGTTGTTCAGATTATGGATGA
TGATGACGCGGGGGAGGAGGAGGGGGAGGGAAGTGAAGGGGAGGAAGAGG
AAGAGGAGGAAGAAGAGGGATTCGAAGTGGGTCTAGGGGAGGAGGAGGAG
GAGGAGGAGCCGGAGGATGAAGGGATGGAGGAGGGGAAGTGGCTTGAGTC
GACTTCCTCGGACGCAGCTTGTGCTGGTCTAGAAGAGGAGGGCGAGGACA
AGGATGGAGTAGGGGAGGGGGAAGCGGTTGGGGTGCTGATTAATGGGGAC
AATGCCCTCGTGTCCGCCTCAGCAGTAGTAGCAGCAGCTTTGAAGATACG
GCAGGAGCAACTGCAAAAAGAACACCAGGATGAGAACGTAAAGGAAGGAG
AGGAGGAGCGACAGTGGCCGGCGTTAGTCATGTCGCAGCAGCATGAGCAG
CAGCGGCTGCAGCTGCTCCTGCAGGAGAAAGGGAATGACGAGGAAGAGCG
GCAGTGGCCCGCATCAATCATGATACAGCAGCAACAGGAGGGAGAGGGAG
ATGAACTTGAGAACGGGGAAGACGATCTCGATATTGAGGAGGAGGAGGAG
GACGAGGATGACAACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGA
CGAGGAAGAGCAGCTGGGTCAGTTTTTCTGGGGGCCGCCTGCGAGTCTTA
GTGGTAGGGGGAAGGGGAGGAGGAGGGAAGGAGGAAGGGTGAGGAGCAGA
AAGGGGGAAGCTTTGCCGGAGGGGGTGAGGACGAGCTTGCCACCGTTGGG
GAGCGATGAGGAGGAGGAAGAGGAGGAGTCTAGTGATGATGATGATGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGTGGAGGAGGAGGTA
GAAGGGGAGGAAGAGGGGGAAGGCGAGAGAGATTACGATGAGAGTTCGAG
TGGAAAGGAGGAGGAGGAAGAAGAAGAGGGAGAAGAAGGGGAAGAGGAGG
AGGAGGAAATCGACGACGACGAGGAGGAAGAAGGTGGGTTGAGGAGCAGT
GGCAGTAGTGAGGCGAGTGAAGTGCTAGCCCAGCTTGATGACCCCTTTGC
GGTGGCTGTACCCCGGTTAAATGTGGCTTTGCCGCATTCTTTATTTGTGG
GAGGAAGCCGAGGGAGGAGTGTGCGGAGGGTGGTGCCGTCGAGGTTAGGA
CCGAGGAGGGAAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAAT
GAGGTCTGCGGTGGTGTCAGTGCATGAGAAGAAGGGGGGGAAGAAGGGAG
GGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGAGAAAGGAGGAAGAGGCG
GTTAATGCTGGCTCTTCGGAAAGAGAGCATGAAATGGAGGAGGAAGGAGA
GGAGGAGGGAGGAGATTTCGGGGAGGGAGGAGATTTCGGGGAGGAGGATG
AGACACAGTCGCCTTTGCAGGAGGAAAAGGATAAGAGTAAGTCTGAAGGG
GAGGATGGGGTGGAAGGGGAGGAGGAGAGGGAGGAGGAAGAGCAGCGTGA
TGGTGGTGACAATGGAGACATGGAAGTGATTGAGTGAAGGAGAGAAGAAA
GAAAGAGATATGGAGAGAGGTGGTATTGAGATAAATGTGGTCTCAAAAGC
AGTGTATATCGTGCATAAAAAGAATGTTGACAGTGGAAATTAAATCAGGA
GGAAGAGGCGACAGGGACAAAGGAAACCTCCCCAAAAAATCTGCTTCTAA
TATATACATCCTACGTATACATATGTGCCAACAACTTAAGTCCATCTTCA
CATCTCTTACTCCTGCTTTTCATGCTCCCCTCTACCTCCTTTATGACATA
TGATGATAATATATGACCTTGCTGCTTTTCAGGGCTTTTTGCCGATCAAT
TTGCCGTCATAATTGCTCCAAGACCCACCATAGACATCTATCTACACAAT
CTTATTTCCTCTCACTCACAATTTATTGACAAAACCTCATCCTCCTTCTC
CTCCTCCTCCTCCTCCCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|651669 >mRNA_6632-protein ID=mRNA_6632-protein|Name=jgi.p|Nanoce1779_2|651669|organism=Nannochloropsis oceanica|type=polypeptide|length=894bp
MYSPCFPLSTSDGGIGGASSSNSSRVNMPPRPQQYHPLQGNHRYLLNTTT
TSIITKISGGGAGGEAGGRGGPAKRARLDTAAVSRPTLLRPPLHHPGREW
EAAMAMEAVHQVRLLDKCQRTLTALPDRLEEALMGPRRRRRRRRRQQRAL
GEKEEKDEERTRKRGSSGSDHMLLDEEIELALFAVHDTSSFHVPAVAAAA
AAAAAAAAVPTASSPSQWMVEDGIMRAKQGLEELRQEVCERPLRGHHVEE
QIGEKKGETGGESMVEKGMNKRKGIREDEKQEELEGKKGEGILMAEEEQR
QGVEEEQQEEESVVEIFDDDKGGKEEETEEDGEEEEEEGEGFEVRLEEEG
EEEEEEEEEDDDEEVGGDEQVEEKSVVQIMDDDDAGEEEGEGSEGEEEEE
EEEEGFEVGLGEEEEEEEPEDEGMEEGKWLESTSSDAACAGLEEEGEDKD
GVGEGEAVGVLINGDNALVSASAVVAAALKIRQEQLQKEHQDENVKEGEE
ERQWPALVMSQQHEQQRLQLLLQEKGNDEEERQWPASIMIQQQQEGEGDE
LENGEDDLDIEEEEEDEDDNEDEDEDEDEDEDEEEQLGQFFWGPPASLSG
RGKGRRREGGRVRSRKGEALPEGVRTSLPPLGSDEEEEEEESSDDDDEEE
EEEEEEEKEEVEEEVEGEEEGEGERDYDESSSGKEEEEEEEGEEGEEEEE
EIDDDEEEEGGLRSSGSSEASEVLAQLDDPFAVAVPRLNVALPHSLFVGG
SRGRSVRRVVPSRLGPRREGGGGGGGEGGEGMRSAVVSVHEKKGGKKGGE
EEEEEEEERRKEEEAVNAGSSEREHEMEEEGEEEGGDFGEGGDFGEEDET
QSPLQEEKDKSKSEGEDGVEGEEEREEEEQRDGGDNGDMEVIE* back to topmRNA from alignment at scaffold_18:319453..322672- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6632 ID=mRNA_6632|Name=jgi.p|Nanoce1779_2|651669|organism=Nannochloropsis oceanica|type=mRNA|length=3220bp|location=Sequence derived from alignment at scaffold_18:319453..322672- (Nannochloropsis oceanica)
TGACCACTCCGAACACAGGCCCTCATACCATACGGGCACAGGGGAGGGTG
AAAGCCGGACCAGTGCTTGCCTGCATCAGTGCATAGGAAGCACTTTCAAG
AAGCTATGTATTCTCCCTGCTTTCCCCTGTCCACCAGTGACGGTGGCATT
GGTGGCGCAAGCAGCAGCAATAGCAGCAGAGTAAACATGCCACCGCGACC
ACAGCAGTACCATCCCCTGCAAGGGAACCATAGATATCTACTCAACACCA
CCACAACATCAATCATCACAAAAATCTCCGGAGGAGGGGCAGGAGGAGAG
GCAGGAGGAAGAGGAGGCCCAGCCAAACGCGCCCGCCTCGACACAGCAGC
TGTAAGCCGCCCGACCCTCCTTAGGCCGCCTCTGCATCATCCGGGGCGGG
AGTGGGAGGCCGCCATGGCTATGGAGGCCGTGCATCAAGTGAGGTTATTG
GACAAATGCCAGCGGACATTGACGGCATTGCCTGATCGCTTGGAAGAGGC
TCTGATGGGGCCGCGGCGGCGGCGACGACGACGACGACGACAACAACGGG
CACTGGGGGAAAAAGAGGAGAAAGATGAGGAGAGGACGAGGAAGAGAGGC
AGCAGTGGTAGTGATCACATGCTGCTGGATGAAGAGATAGAGCTAGCCCT
CTTCGCCGTACACGACACGAGCTCCTTCCACGTCCCTGCGGTAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTACCGACAGCCTCCAGTCCA
TCGCAGTGGATGGTTGAAGATGGCATCATGAGGGCCAAGCAGGGCCTAGA
GGAATTGAGGCAGGAAGTGTGTGAGAGGCCATTGCGAGGTCATCACGTAG
AGGAGCAGATTGGAGAGAAGAAGGGAGAAACAGGAGGAGAATCGATGGTC
GAAAAAGGTATGAATAAGAGGAAAGGAATTAGGGAGGACGAAAAGCAGGA
GGAACTGGAGGGGAAGAAGGGAGAAGGAATTTTGATGGCGGAGGAAGAAC
AGAGACAGGGAGTAGAGGAGGAGCAGCAGGAGGAGGAGAGCGTTGTTGAA
ATTTTTGATGATGACAAGGGTGGGAAGGAGGAGGAAACTGAAGAGGATGG
AGAGGAGGAAGAGGAGGAAGGAGAAGGGTTTGAGGTGCGTCTAGAGGAGG
AAGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATGATGAGGAGGTA
GGAGGGGACGAGCAGGTAGAGGAGAAGAGTGTTGTTCAGATTATGGATGA
TGATGACGCGGGGGAGGAGGAGGGGGAGGGAAGTGAAGGGGAGGAAGAGG
AAGAGGAGGAAGAAGAGGGATTCGAAGTGGGTCTAGGGGAGGAGGAGGAG
GAGGAGGAGCCGGAGGATGAAGGGATGGAGGAGGGGAAGTGGCTTGAGTC
GACTTCCTCGGACGCAGCTTGTGCTGGTCTAGAAGAGGAGGGCGAGGACA
AGGATGGAGTAGGGGAGGGGGAAGCGGTTGGGGTGCTGATTAATGGGGAC
AATGCCCTCGTGTCCGCCTCAGCAGTAGTAGCAGCAGCTTTGAAGATACG
GCAGGAGCAACTGCAAAAAGAACACCAGGATGAGAACGTAAAGGAAGGAG
AGGAGGAGCGACAGTGGCCGGCGTTAGTCATGTCGCAGCAGCATGAGCAG
CAGCGGCTGCAGCTGCTCCTGCAGGAGAAAGGGAATGACGAGGAAGAGCG
GCAGTGGCCCGCATCAATCATGATACAGCAGCAACAGGAGGGAGAGGGAG
ATGAACTTGAGAACGGGGAAGACGATCTCGATATTGAGGAGGAGGAGGAG
GACGAGGATGACAACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGA
CGAGGAAGAGCAGCTGGGTCAGTTTTTCTGGGGGCCGCCTGCGAGTCTTA
GTGGTAGGGGGAAGGGGAGGAGGAGGGAAGGAGGAAGGGTGAGGAGCAGA
AAGGGGGAAGCTTTGCCGGAGGGGGTGAGGACGAGCTTGCCACCGTTGGG
GAGCGATGAGGAGGAGGAAGAGGAGGAGTCTAGTGATGATGATGATGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGTGGAGGAGGAGGTA
GAAGGGGAGGAAGAGGGGGAAGGCGAGAGAGATTACGATGAGAGTTCGAG
TGGAAAGGAGGAGGAGGAAGAAGAAGAGGGAGAAGAAGGGGAAGAGGAGG
AGGAGGAAATCGACGACGACGAGGAGGAAGAAGGTGGGTTGAGGAGCAGT
GGCAGTAGTGAGGCGAGTGAAGTGCTAGCCCAGCTTGATGACCCCTTTGC
GGTGGCTGTACCCCGGTTAAATGTGGCTTTGCCGCATTCTTTATTTGTGG
GAGGAAGCCGAGGGAGGAGTGTGCGGAGGGTGGTGCCGTCGAGGTTAGGA
CCGAGGAGGGAAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAAT
GAGGTCTGCGGTGGTGTCAGTGCATGAGAAGAAGGGGGGGAAGAAGGGAG
GGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGAGAAAGGAGGAAGAGGCG
GTTAATGCTGGCTCTTCGGAAAGAGAGCATGAAATGGAGGAGGAAGGAGA
GGAGGAGGGAGGAGATTTCGGGGAGGGAGGAGATTTCGGGGAGGAGGATG
AGACACAGTCGCCTTTGCAGGAGGAAAAGGATAAGAGTAAGTCTGAAGGG
GAGGATGGGGTGGAAGGGGAGGAGGAGAGGGAGGAGGAAGAGCAGCGTGA
TGGTGGTGACAATGGAGACATGGAAGTGATTGAGTGAAGGAGAGAAGAAA
GAAAGAGATATGGAGAGAGGTGGTATTGAGATAAATGTGGTCTCAAAAGC
AGTGTATATCGTGCATAAAAAGAATGTTGACAGTGGAAATTAAATCAGGA
GGAAGAGGCGACAGGGACAAAGGAAACCTCCCCAAAAAATCTGCTTCTAA
TATATACATCCTACGTATACATATGTGCCAACAACTTAAGTCCATCTTCA
CATCTCTTACTCCTGCTTTTCATGCTCCCCTCTACCTCCTTTATGACATA
TGATGATAATATATGACCTTGCTGCTTTTCAGGGCTTTTTGCCGATCAAT
TTGCCGTCATAATTGCTCCAAGACCCACCATAGACATCTATCTACACAAT
CTTATTTCCTCTCACTCACAATTTATTGACAAAACCTCATCCTCCTTCTC
CTCCTCCTCCTCCTCCCCCC back to topCoding sequence (CDS) from alignment at scaffold_18:319453..322672- >mRNA_6632 ID=mRNA_6632|Name=jgi.p|Nanoce1779_2|651669|organism=Nannochloropsis oceanica|type=CDS|length=2682bp|location=Sequence derived from alignment at scaffold_18:319453..322672- (Nannochloropsis oceanica)
ATGTATTCTCCCTGCTTTCCCCTGTCCACCAGTGACGGTGGCATTGGTGG
CGCAAGCAGCAGCAATAGCAGCAGAGTAAACATGCCACCGCGACCACAGC
AGTACCATCCCCTGCAAGGGAACCATAGATATCTACTCAACACCACCACA
ACATCAATCATCACAAAAATCTCCGGAGGAGGGGCAGGAGGAGAGGCAGG
AGGAAGAGGAGGCCCAGCCAAACGCGCCCGCCTCGACACAGCAGCTGTAA
GCCGCCCGACCCTCCTTAGGCCGCCTCTGCATCATCCGGGGCGGGAGTGG
GAGGCCGCCATGGCTATGGAGGCCGTGCATCAAGTGAGGTTATTGGACAA
ATGCCAGCGGACATTGACGGCATTGCCTGATCGCTTGGAAGAGGCTCTGA
TGGGGCCGCGGCGGCGGCGACGACGACGACGACGACAACAACGGGCACTG
GGGGAAAAAGAGGAGAAAGATGAGGAGAGGACGAGGAAGAGAGGCAGCAG
TGGTAGTGATCACATGCTGCTGGATGAAGAGATAGAGCTAGCCCTCTTCG
CCGTACACGACACGAGCTCCTTCCACGTCCCTGCGGTAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCTGTACCGACAGCCTCCAGTCCATCGCA
GTGGATGGTTGAAGATGGCATCATGAGGGCCAAGCAGGGCCTAGAGGAAT
TGAGGCAGGAAGTGTGTGAGAGGCCATTGCGAGGTCATCACGTAGAGGAG
CAGATTGGAGAGAAGAAGGGAGAAACAGGAGGAGAATCGATGGTCGAAAA
AGGTATGAATAAGAGGAAAGGAATTAGGGAGGACGAAAAGCAGGAGGAAC
TGGAGGGGAAGAAGGGAGAAGGAATTTTGATGGCGGAGGAAGAACAGAGA
CAGGGAGTAGAGGAGGAGCAGCAGGAGGAGGAGAGCGTTGTTGAAATTTT
TGATGATGACAAGGGTGGGAAGGAGGAGGAAACTGAAGAGGATGGAGAGG
AGGAAGAGGAGGAAGGAGAAGGGTTTGAGGTGCGTCTAGAGGAGGAAGGA
GAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATGATGAGGAGGTAGGAGG
GGACGAGCAGGTAGAGGAGAAGAGTGTTGTTCAGATTATGGATGATGATG
ACGCGGGGGAGGAGGAGGGGGAGGGAAGTGAAGGGGAGGAAGAGGAAGAG
GAGGAAGAAGAGGGATTCGAAGTGGGTCTAGGGGAGGAGGAGGAGGAGGA
GGAGCCGGAGGATGAAGGGATGGAGGAGGGGAAGTGGCTTGAGTCGACTT
CCTCGGACGCAGCTTGTGCTGGTCTAGAAGAGGAGGGCGAGGACAAGGAT
GGAGTAGGGGAGGGGGAAGCGGTTGGGGTGCTGATTAATGGGGACAATGC
CCTCGTGTCCGCCTCAGCAGTAGTAGCAGCAGCTTTGAAGATACGGCAGG
AGCAACTGCAAAAAGAACACCAGGATGAGAACGTAAAGGAAGGAGAGGAG
GAGCGACAGTGGCCGGCGTTAGTCATGTCGCAGCAGCATGAGCAGCAGCG
GCTGCAGCTGCTCCTGCAGGAGAAAGGGAATGACGAGGAAGAGCGGCAGT
GGCCCGCATCAATCATGATACAGCAGCAACAGGAGGGAGAGGGAGATGAA
CTTGAGAACGGGGAAGACGATCTCGATATTGAGGAGGAGGAGGAGGACGA
GGATGACAACGAGGACGAGGACGAGGACGAGGACGAGGACGAGGACGAGG
AAGAGCAGCTGGGTCAGTTTTTCTGGGGGCCGCCTGCGAGTCTTAGTGGT
AGGGGGAAGGGGAGGAGGAGGGAAGGAGGAAGGGTGAGGAGCAGAAAGGG
GGAAGCTTTGCCGGAGGGGGTGAGGACGAGCTTGCCACCGTTGGGGAGCG
ATGAGGAGGAGGAAGAGGAGGAGTCTAGTGATGATGATGATGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGTGGAGGAGGAGGTAGAAGG
GGAGGAAGAGGGGGAAGGCGAGAGAGATTACGATGAGAGTTCGAGTGGAA
AGGAGGAGGAGGAAGAAGAAGAGGGAGAAGAAGGGGAAGAGGAGGAGGAG
GAAATCGACGACGACGAGGAGGAAGAAGGTGGGTTGAGGAGCAGTGGCAG
TAGTGAGGCGAGTGAAGTGCTAGCCCAGCTTGATGACCCCTTTGCGGTGG
CTGTACCCCGGTTAAATGTGGCTTTGCCGCATTCTTTATTTGTGGGAGGA
AGCCGAGGGAGGAGTGTGCGGAGGGTGGTGCCGTCGAGGTTAGGACCGAG
GAGGGAAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAATGAGGT
CTGCGGTGGTGTCAGTGCATGAGAAGAAGGGGGGGAAGAAGGGAGGGGAG
GAGGAGGAGGAGGAGGAGGAGGAGAGGAGAAAGGAGGAAGAGGCGGTTAA
TGCTGGCTCTTCGGAAAGAGAGCATGAAATGGAGGAGGAAGGAGAGGAGG
AGGGAGGAGATTTCGGGGAGGGAGGAGATTTCGGGGAGGAGGATGAGACA
CAGTCGCCTTTGCAGGAGGAAAAGGATAAGAGTAAGTCTGAAGGGGAGGA
TGGGGTGGAAGGGGAGGAGGAGAGGGAGGAGGAAGAGCAGCGTGATGGTG
GTGACAATGGAGACATGGAAGTGATTGAGTGA back to top
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