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Properties
| Property Name | Value |
|---|
| TranscriptId | 597612 |
| Track | FilteredModels2 |
| ProteinId | 597526 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:310027..311747 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6626 ID=mRNA_6626|Name=jgi.p|Nanoce1779_2|597526|organism=Nannochloropsis oceanica|type=mRNA|length=1087bp
CAGCAGCTGAAAATGTGGAATTCCCGCATCTCTCCTGGTCGTCCGCTGCT
CCTCCTGCTTCTGCTGCTCCTACATGTCAGCGCCACCACGACAGCCGCTT
CTCTTGACTCGGCCGCTGCCCGCAAGGAACGTCTGGAGGCCAAGCGGGCC
TTTGACCGGGTGAAGCAGCATCCTTTGGTCAATGAGGAGGAGGAGGGACC
CACGGTAGAGTACAAGGCGGCGGACGGCAGCATCAAAAGCATGACCCAGG
CCGAGCTCCAGAAGCGCCTGCAGCAGCAAGAAGCCGTGCTACCCCACCTA
GATCAGGACGGCAGTGCCCTTAGCAAATCTGAGGAAGGAAAGGCGACGAT
AGAAGAGCTCAAGACCAAGGACCCCTATCTTTCCCGGATGATCCAAGCGT
CGGAGTTTGCGCTGCACAGGCTGCAAGAAGCCGGCGAGGTGGGCGACAAT
GCGCGACTCAAGGGGTTTCATTCAGTGGATGACGACAATGAGAAGGTGAG
GATGCTCTTTCCTTGGACATTCATGCATGATTTGACTCCGCTCCTTAAGC
AATCTCATACATTCTCTCTCGGTTTTAACCTTACTTGGCTCTCATCGTAC
AATTATCTTAATCTCGCTTCCGCTCTATTATGTTCTTTCAACACTACCCG
TTCATTCCCCTCTCTTTCTTACACGACTCATAAACAGGACACCACCGTTG
TAGGCGCAGACTTGATCCGCCTCCATCTGCATTTACATGTCGCCAATGAT
GACACCGAGGATGAAAGGAAATTTGAGGTGTTGCTCGAAGGACGGGAAGG
ATTCGGGGCTATGACAAAGGCGTGGCGCGTAGTGGGCACGCAAAAGGAAG
CCATTGATCTTCCTGCCCCATCGCCATTCCGTGTTTCTTCTCCCTCCTCG
GTCTGGAACTGGTTGTCCATGGTGCTTGGCGTGGTGGGGGGCGCGCAGAC
AGGAGGAGAGGACGCAGAATGGTTGAAAGGTGTGCTTCTGATGGTGGGTG
GTGGTCTGCTGTGCCTCGGTATGGGGCTGGTATTGATGACAACGGCGGCA
GCGGGGGACCTTGGAGGGAGGAAAGGGGATTGAGGTG back to topprotein sequence of jgi.p|Nanoce1779_2|597526 >mRNA_6626-protein ID=mRNA_6626-protein|Name=jgi.p|Nanoce1779_2|597526|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MWNSRISPGRPLLLLLLLLLHVSATTTAASLDSAAARKERLEAKRAFDRV
KQHPLVNEEEEGPTVEYKAADGSIKSMTQAELQKRLQQQEAVLPHLDQDG
SALSKSEEGKATIEELKTKDPYLSRMIQASEFALHRLQEAGEVGDNARLK
GFHSVDDDNEKVRMLFPWTFMHDLTPLLKQSHTFSLGFNLTWLSSYNYLN
LASALLCSFNTTRSFPSLSYTTHKQDTTVVGADLIRLHLHLHVANDDTED
ERKFEVLLEGREGFGAMTKAWRVVGTQKEAIDLPAPSPFRVSSPSSVWNW
LSMVLGVVGGAQTGGEDAEWLKGVLLMVGGGLLCLGMGLVLMTTAAAGDL
GGRKGD* back to topmRNA from alignment at scaffold_18:310027..311747- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6626 ID=mRNA_6626|Name=jgi.p|Nanoce1779_2|597526|organism=Nannochloropsis oceanica|type=mRNA|length=1721bp|location=Sequence derived from alignment at scaffold_18:310027..311747- (Nannochloropsis oceanica)
CAGCAGCTGAAAATGTGGAATTCCCGCATCTCTCCTGGTCGTCCGCTGCT
CCTCCTGCTTCTGCTGCTCCTACATGTCAGCGCCACCACGACAGGTAAGC
CCCAGAAGCATGATATGTTGCCTCCGCAGGCGGTCCATCTCCAGCTCAAC
TTTCCACGTTCATGATCTAAACACGCGCCCCAGCCGCTTCTCTTGACTCG
GCCGCTGCCCGCAAGGAACGTCTGGAGGCCAAGCGGGCCTTTGACCGGGT
GAAGCAGCATCCTTTGGTCAATGAGGAGGAGGAGGGACCCACGGTAGAGT
ACAAGGCGGCGGACGGCAGCATCAAAAGCATGACCCAGGTGCGTTGAGTG
GGAATGAAGAAACCTTGCAATTTTTCGGTAGGGAAAGATGAGTTCTGTAG
CGCCAAGACATCCACTTTCTGCGACTCCTTTCTTACCATGTCCTAACTGG
CCCATCCCCCAGGCCGAGCTCCAGAAGCGCCTGCAGCAGCAAGAAGCCGT
GCTACCCCACCTAGATCAGGACGGCAGTGCCCTTAGCAAATCTGAGGAAG
GAAAGGCGACGATAGAAGAGGTGCGTGGTGGCTGGGCTGGTGAGCGAAGG
AAAAAGGAGAGATGAAGGCTCTTTTCACTTACCCTGCACTCTTCCATGCA
TCCTTGGAATGGCTTACACAACGAACAGACACACGCACACACACAGCTCA
AGACCAAGGACCCCTATCTTTCCCGGATGATCCAAGCGTCGGAGTTTGCG
CTGCACAGGTTGGTAATGGATTCAGGTTGGGAGGGGGATGGTGGCGTAGG
TTGGGAGGGGGGTGGTGGCGAGAGAGTGATTATATTGTTTTTGTTGTTGG
CTGGCCTCCCATCCCTTCGCACCTTCTTTCTGTGTTTTGATATCACGATT
TGAAGCACGCGTATATAATTACTTCAATACATGAAAGGCTGCAAGAAGCC
GGCGAGGTGGGCGACAATGCGCGACTCAAGGGGTTTCATTCAGTGGATGA
CGACAATGAGAAGGTGAGGATGCTCTTTCCTTGGACATTCATGCATGATT
TGACTCCGCTCCTTAAGCAATCTCATACATTCTCTCTCGGTTTTAACCTT
ACTTGGCTCTCATCGTACAATTATCTTAATCTCGCTTCCGCTCTATTATG
TTCTTTCAACACTACCCGTTCATTCCCCTCTCTTTCTTACACGACTCATA
AACAGGACACCACCGTTGTAGGCGCAGACTTGATCCGCCTCCATCTGCAT
TTACATGTCGCCAATGATGACACCGAGGATGAAAGGAAATTTGAGGTAAA
TTGATGACGATGGGGAGGGAGAGACGGGACAAATCGCCTTCCCCCTTCCA
TCACTTTCTTTGTCCGGTCGCGCCCCTTTGCCTTAAATGCGTCAAATATA
ACCACTAACAGGTGTTGCTCGAAGGACGGGAAGGATTCGGGGCTATGACA
AAGGCGTGGCGCGTAGTGGGCACGCAAAAGGAAGCCATTGATCTTCCTGC
CCCATCGCCATTCCGTGTTTCTTCTCCCTCCTCGGTCTGGAACTGGTTGT
CCATGGTGCTTGGCGTGGTGGGGGGCGCGCAGACAGGAGGAGAGGACGCA
GAATGGTTGAAAGGTGTGCTTCTGATGGTGGGTGGTGGTCTGCTGTGCCT
CGGTATGGGGCTGGTATTGATGACAACGGCGGCAGCGGGGGACCTTGGAG
GGAGGAAAGGGGATTGAGGTG back to topCoding sequence (CDS) from alignment at scaffold_18:310027..311747- >mRNA_6626 ID=mRNA_6626|Name=jgi.p|Nanoce1779_2|597526|organism=Nannochloropsis oceanica|type=CDS|length=6426bp|location=Sequence derived from alignment at scaffold_18:310027..311747- (Nannochloropsis oceanica)
GTGTTGCTCGAAGGACGGGAAGGATTCGGGGCTATGACAAAGGCGTGGCG
CGTAGTGGGCACGCAAAAGGAAGCCATTGATCTTCCTGCCCCATCGCCAT
TCCGTGTTTCTTCTCCCTCCTCGGTCTGGAACTGGTTGTCCATGGTGCTT
GGCGTGGTGGGGGGCGCGCAGACAGGAGGAGAGGACGCAGAATGGTTGAA
AGGTGTGCTTCTGATGGTGGGTGGTGGTCTGCTGTGCCTCGGTATGGGGC
TGGTATTGATGACAACGGCGGCAGCGGGGGACCTTGGAGGGAGGAAAGGG
GATTGAGCTGCAAGAAGCCGGCGAGGTGGGCGACAATGCGCGACTCAAGG
GGTTTCATTCAGTGGATGACGACAATGAGAAGGTGAGGATGCTCTTTCCT
TGGACATTCATGCATGATTTGACTCCGCTCCTTAAGCAATCTCATACATT
CTCTCTCGGTTTTAACCTTACTTGGCTCTCATCGTACAATTATCTTAATC
TCGCTTCCGCTCTATTATGTTCTTTCAACACTACCCGTTCATTCCCCTCT
CTTTCTTACACGACTCATAAACAGGACACCACCGTTGTAGGCGCAGACTT
GATCCGCCTCCATCTGCATTTACATGTCGCCAATGATGACACCGAGGATG
AAAGGAAATTTGAGCTCAAGACCAAGGACCCCTATCTTTCCCGGATGATC
CAAGCGTCGGAGTTTGCGCTGCACAGGCCGAGCTCCAGAAGCGCCTGCAG
CAGCAAGAAGCCGTGCTACCCCACCTAGATCAGGACGGCAGTGCCCTTAG
CAAATCTGAGGAAGGAAAGGCGACGATAGAAGAGCCGCTTCTCTTGACTC
GGCCGCTGCCCGCAAGGAACGTCTGGAGGCCAAGCGGGCCTTTGACCGGG
TGAAGCAGCATCCTTTGGTCAATGAGGAGGAGGAGGGACCCACGGTAGAG
TACAAGGCGGCGGACGGCAGCATCAAAAGCATGACCCAGATGTGGAATTC
CCGCATCTCTCCTGGTCGTCCGCTGCTCCTCCTGCTTCTGCTGCTCCTAC
ATGTCAGCGCCACCACGACAGGTGTTGCTCGAAGGACGGGAAGGATTCGG
GGCTATGACAAAGGCGTGGCGCGTAGTGGGCACGCAAAAGGAAGCCATTG
ATCTTCCTGCCCCATCGCCATTCCGTGTTTCTTCTCCCTCCTCGGTCTGG
AACTGGTTGTCCATGGTGCTTGGCGTGGTGGGGGGCGCGCAGACAGGAGG
AGAGGACGCAGAATGGTTGAAAGGTGTGCTTCTGATGGTGGGTGGTGGTC
TGCTGTGCCTCGGTATGGGGCTGGTATTGATGACAACGGCGGCAGCGGGG
GACCTTGGAGGGAGGAAAGGGGATTGAGCTGCAAGAAGCCGGCGAGGTGG
GCGACAATGCGCGACTCAAGGGGTTTCATTCAGTGGATGACGACAATGAG
AAGGTGAGGATGCTCTTTCCTTGGACATTCATGCATGATTTGACTCCGCT
CCTTAAGCAATCTCATACATTCTCTCTCGGTTTTAACCTTACTTGGCTCT
CATCGTACAATTATCTTAATCTCGCTTCCGCTCTATTATGTTCTTTCAAC
ACTACCCGTTCATTCCCCTCTCTTTCTTACACGACTCATAAACAGGACAC
CACCGTTGTAGGCGCAGACTTGATCCGCCTCCATCTGCATTTACATGTCG
CCAATGATGACACCGAGGATGAAAGGAAATTTGAGCTCAAGACCAAGGAC
CCCTATCTTTCCCGGATGATCCAAGCGTCGGAGTTTGCGCTGCACAGGCC
GAGCTCCAGAAGCGCCTGCAGCAGCAAGAAGCCGTGCTACCCCACCTAGA
TCAGGACGGCAGTGCCCTTAGCAAATCTGAGGAAGGAAAGGCGACGATAG
AAGAGCCGCTTCTCTTGACTCGGCCGCTGCCCGCAAGGAACGTCTGGAGG
CCAAGCGGGCCTTTGACCGGGTGAAGCAGCATCCTTTGGTCAATGAGGAG
GAGGAGGGACCCACGGTAGAGTACAAGGCGGCGGACGGCAGCATCAAAAG
CATGACCCAGATGTGGAATTCCCGCATCTCTCCTGGTCGTCCGCTGCTCC
TCCTGCTTCTGCTGCTCCTACATGTCAGCGCCACCACGACAGGTGTTGCT
CGAAGGACGGGAAGGATTCGGGGCTATGACAAAGGCGTGGCGCGTAGTGG
GCACGCAAAAGGAAGCCATTGATCTTCCTGCCCCATCGCCATTCCGTGTT
TCTTCTCCCTCCTCGGTCTGGAACTGGTTGTCCATGGTGCTTGGCGTGGT
GGGGGGCGCGCAGACAGGAGGAGAGGACGCAGAATGGTTGAAAGGTGTGC
TTCTGATGGTGGGTGGTGGTCTGCTGTGCCTCGGTATGGGGCTGGTATTG
ATGACAACGGCGGCAGCGGGGGACCTTGGAGGGAGGAAAGGGGATTGAGC
TGCAAGAAGCCGGCGAGGTGGGCGACAATGCGCGACTCAAGGGGTTTCAT
TCAGTGGATGACGACAATGAGAAGGTGAGGATGCTCTTTCCTTGGACATT
CATGCATGATTTGACTCCGCTCCTTAAGCAATCTCATACATTCTCTCTCG
GTTTTAACCTTACTTGGCTCTCATCGTACAATTATCTTAATCTCGCTTCC
GCTCTATTATGTTCTTTCAACACTACCCGTTCATTCCCCTCTCTTTCTTA
CACGACTCATAAACAGGACACCACCGTTGTAGGCGCAGACTTGATCCGCC
TCCATCTGCATTTACATGTCGCCAATGATGACACCGAGGATGAAAGGAAA
TTTGAGCTCAAGACCAAGGACCCCTATCTTTCCCGGATGATCCAAGCGTC
GGAGTTTGCGCTGCACAGGCCGAGCTCCAGAAGCGCCTGCAGCAGCAAGA
AGCCGTGCTACCCCACCTAGATCAGGACGGCAGTGCCCTTAGCAAATCTG
AGGAAGGAAAGGCGACGATAGAAGAGCCGCTTCTCTTGACTCGGCCGCTG
CCCGCAAGGAACGTCTGGAGGCCAAGCGGGCCTTTGACCGGGTGAAGCAG
CATCCTTTGGTCAATGAGGAGGAGGAGGGACCCACGGTAGAGTACAAGGC
GGCGGACGGCAGCATCAAAAGCATGACCCAGATGTGGAATTCCCGCATCT
CTCCTGGTCGTCCGCTGCTCCTCCTGCTTCTGCTGCTCCTACATGTCAGC
GCCACCACGACAGGTGTTGCTCGAAGGACGGGAAGGATTCGGGGCTATGA
CAAAGGCGTGGCGCGTAGTGGGCACGCAAAAGGAAGCCATTGATCTTCCT
GCCCCATCGCCATTCCGTGTTTCTTCTCCCTCCTCGGTCTGGAACTGGTT
GTCCATGGTGCTTGGCGTGGTGGGGGGCGCGCAGACAGGAGGAGAGGACG
CAGAATGGTTGAAAGGTGTGCTTCTGATGGTGGGTGGTGGTCTGCTGTGC
CTCGGTATGGGGCTGGTATTGATGACAACGGCGGCAGCGGGGGACCTTGG
AGGGAGGAAAGGGGATTGAGCTGCAAGAAGCCGGCGAGGTGGGCGACAAT
GCGCGACTCAAGGGGTTTCATTCAGTGGATGACGACAATGAGAAGGTGAG
GATGCTCTTTCCTTGGACATTCATGCATGATTTGACTCCGCTCCTTAAGC
AATCTCATACATTCTCTCTCGGTTTTAACCTTACTTGGCTCTCATCGTAC
AATTATCTTAATCTCGCTTCCGCTCTATTATGTTCTTTCAACACTACCCG
TTCATTCCCCTCTCTTTCTTACACGACTCATAAACAGGACACCACCGTTG
TAGGCGCAGACTTGATCCGCCTCCATCTGCATTTACATGTCGCCAATGAT
GACACCGAGGATGAAAGGAAATTTGAGCTCAAGACCAAGGACCCCTATCT
TTCCCGGATGATCCAAGCGTCGGAGTTTGCGCTGCACAGGCCGAGCTCCA
GAAGCGCCTGCAGCAGCAAGAAGCCGTGCTACCCCACCTAGATCAGGACG
GCAGTGCCCTTAGCAAATCTGAGGAAGGAAAGGCGACGATAGAAGAGCCG
CTTCTCTTGACTCGGCCGCTGCCCGCAAGGAACGTCTGGAGGCCAAGCGG
GCCTTTGACCGGGTGAAGCAGCATCCTTTGGTCAATGAGGAGGAGGAGGG
ACCCACGGTAGAGTACAAGGCGGCGGACGGCAGCATCAAAAGCATGACCC
AGATGTGGAATTCCCGCATCTCTCCTGGTCGTCCGCTGCTCCTCCTGCTT
CTGCTGCTCCTACATGTCAGCGCCACCACGACAGGTGTTGCTCGAAGGAC
GGGAAGGATTCGGGGCTATGACAAAGGCGTGGCGCGTAGTGGGCACGCAA
AAGGAAGCCATTGATCTTCCTGCCCCATCGCCATTCCGTGTTTCTTCTCC
CTCCTCGGTCTGGAACTGGTTGTCCATGGTGCTTGGCGTGGTGGGGGGCG
CGCAGACAGGAGGAGAGGACGCAGAATGGTTGAAAGGTGTGCTTCTGATG
GTGGGTGGTGGTCTGCTGTGCCTCGGTATGGGGCTGGTATTGATGACAAC
GGCGGCAGCGGGGGACCTTGGAGGGAGGAAAGGGGATTGAGCTGCAAGAA
GCCGGCGAGGTGGGCGACAATGCGCGACTCAAGGGGTTTCATTCAGTGGA
TGACGACAATGAGAAGGTGAGGATGCTCTTTCCTTGGACATTCATGCATG
ATTTGACTCCGCTCCTTAAGCAATCTCATACATTCTCTCTCGGTTTTAAC
CTTACTTGGCTCTCATCGTACAATTATCTTAATCTCGCTTCCGCTCTATT
ATGTTCTTTCAACACTACCCGTTCATTCCCCTCTCTTTCTTACACGACTC
ATAAACAGGACACCACCGTTGTAGGCGCAGACTTGATCCGCCTCCATCTG
CATTTACATGTCGCCAATGATGACACCGAGGATGAAAGGAAATTTGAGCT
CAAGACCAAGGACCCCTATCTTTCCCGGATGATCCAAGCGTCGGAGTTTG
CGCTGCACAGGCCGAGCTCCAGAAGCGCCTGCAGCAGCAAGAAGCCGTGC
TACCCCACCTAGATCAGGACGGCAGTGCCCTTAGCAAATCTGAGGAAGGA
AAGGCGACGATAGAAGAGCCGCTTCTCTTGACTCGGCCGCTGCCCGCAAG
GAACGTCTGGAGGCCAAGCGGGCCTTTGACCGGGTGAAGCAGCATCCTTT
GGTCAATGAGGAGGAGGAGGGACCCACGGTAGAGTACAAGGCGGCGGACG
GCAGCATCAAAAGCATGACCCAGATGTGGAATTCCCGCATCTCTCCTGGT
CGTCCGCTGCTCCTCCTGCTTCTGCTGCTCCTACATGTCAGCGCCACCAC
GACAGGTGTTGCTCGAAGGACGGGAAGGATTCGGGGCTATGACAAAGGCG
TGGCGCGTAGTGGGCACGCAAAAGGAAGCCATTGATCTTCCTGCCCCATC
GCCATTCCGTGTTTCTTCTCCCTCCTCGGTCTGGAACTGGTTGTCCATGG
TGCTTGGCGTGGTGGGGGGCGCGCAGACAGGAGGAGAGGACGCAGAATGG
TTGAAAGGTGTGCTTCTGATGGTGGGTGGTGGTCTGCTGTGCCTCGGTAT
GGGGCTGGTATTGATGACAACGGCGGCAGCGGGGGACCTTGGAGGGAGGA
AAGGGGATTGAGCTGCAAGAAGCCGGCGAGGTGGGCGACAATGCGCGACT
CAAGGGGTTTCATTCAGTGGATGACGACAATGAGAAGGTGAGGATGCTCT
TTCCTTGGACATTCATGCATGATTTGACTCCGCTCCTTAAGCAATCTCAT
ACATTCTCTCTCGGTTTTAACCTTACTTGGCTCTCATCGTACAATTATCT
TAATCTCGCTTCCGCTCTATTATGTTCTTTCAACACTACCCGTTCATTCC
CCTCTCTTTCTTACACGACTCATAAACAGGACACCACCGTTGTAGGCGCA
GACTTGATCCGCCTCCATCTGCATTTACATGTCGCCAATGATGACACCGA
GGATGAAAGGAAATTTGAGCTCAAGACCAAGGACCCCTATCTTTCCCGGA
TGATCCAAGCGTCGGAGTTTGCGCTGCACAGGCCGAGCTCCAGAAGCGCC
TGCAGCAGCAAGAAGCCGTGCTACCCCACCTAGATCAGGACGGCAGTGCC
CTTAGCAAATCTGAGGAAGGAAAGGCGACGATAGAAGAGCCGCTTCTCTT
GACTCGGCCGCTGCCCGCAAGGAACGTCTGGAGGCCAAGCGGGCCTTTGA
CCGGGTGAAGCAGCATCCTTTGGTCAATGAGGAGGAGGAGGGACCCACGG
TAGAGTACAAGGCGGCGGACGGCAGCATCAAAAGCATGACCCAGATGTGG
AATTCCCGCATCTCTCCTGGTCGTCCGCTGCTCCTCCTGCTTCTGCTGCT
CCTACATGTCAGCGCCACCACGACAG back to top
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