Properties
Property Name | Value |
TranscriptId | 123009 |
Track | FilteredModels2 |
ProteinId | 122923 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_18 | supercontig | scaffold_18:280142..282011 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6612 ID=mRNA_6612|Name=jgi.p|Nanoce1779_2|122923|organism=Nannochloropsis oceanica|type=mRNA|length=1501bp ATTGCACTTGTTCAGTGCTACTGTGTGCACTAGGGCATTTGGACGGGGTC GTATGACGCGGCGAAGTGGTCGCCATTGCCGCGTCGACCTCCCCTCTTAT CCATGCAAGTTTGCTCTCATCATCTCCTCGGCTTCCTGTCCAGCTGGGAT GCGTTTGCCTCCAAGGACAATTGACGGCGTCCTCAAGCCCCTGGTTGGAT TCCGGGTCGCCGGTCCTCGTCGATTCTTCCTTGCCCGGTGACGCCCGCTC TTCCTCCAGTCACACACATCCGCCTCCGCAACCGAGCGCTAATACTTCAC CAATTAAAAAGAAGAGCCTCGGCAGCAAACACCCCTGACACGCCTCAATG GAGCGGTACCAGAAATTGGAAAAGATAGGGGAAGGCACATACGGGGTGGT GTACAAGGCCAAGGACCGGGTGACCAATGAGGTCGTCGCTTTGAAAAAGA TCCGCCTGGAAGCCGAAGACGAAGGCATTCCTTCCACGGCCATCCGGGAG ATTTCCCTGCTCAAAGAGCTACAACACCCCAATATCGTACGCTTATACGA CGTAGTTCACACAGAGCGCAAGCTTACATTGGTATTCGAATTTCTCGACC AAGACCTGAAAAAATACCTAGACATATGCGACAATGGCCTCGAGCTCGCC GTCCTTCAGTCCTTCCTCTACCAGCTCCTCCACGGCGTCGCCTACTGCCA CGACCACCGCGTGCTCCATCGGGATTTGAAACCTCAAAATCTTCTCATCA ATCGCGACGGTGAATTAAAGCTGGCTGATTTTGGCTTGGCTCGTGCGTTC GGCATCCCTGTCCGAAGCTACACCCACGAGGTGGTGACGCTCTGGTACCG TGCCCCCGACGTGTTGATGGGCTCTAGGAAATACAGCACTCCGGTGGATA TCTGGTCGATTGGCTGCATTTTTGCTGAGATGGCTAACGGACGGCCATTG TTTGCGGGGGCCTCGGAGAGTGATCAATTGGATAGAATTTTTCGCGCCCT TGGCACGCCCACCGAGGCCGTCTACCCTGGTATAGTGGAGCTGCCGGAAT TTCAAAAAGTCAAAGCACAATTTCCACGTTATCAATCCCTGGAGTCCTGG GCGAGTTTAGTGCCGACGTTACCGCCGTTGGGGATCGATTTGATCAGTAA GATGTTGACATTTGACCCGTCGAAGAGGATATCAGCGAGAGATGCCTTGG CCCATGCCTTCTTTGGGGAGATCCATGCGCATGGCCATGTGCATATACAG CAGGGAATGGGGGTTGGTGGAAGGGGGGGAGAAGAAGGAGGAGGAGGGGG GGGGGGTCCACCATCATCATCAGCAGTTCCATCATCAGCAGCAGCAGTTC CATAATCACCATCATCACCACCATCATCAACAACAGCAGCAACAGCAGAT CCAGCAGCAAATCCAACTGCAGCCAATGATGAATGCGCACATTTATGGCG CCCAAGCACAACATCAATCTCACCACAGCCACCATCATCAGCATCCATCA C back to topprotein sequence of jgi.p|Nanoce1779_2|122923 >mRNA_6612-protein ID=mRNA_6612-protein|Name=jgi.p|Nanoce1779_2|122923|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp MERYQKLEKIGEGTYGVVYKAKDRVTNEVVALKKIRLEAEDEGIPSTAIR EISLLKELQHPNIVRLYDVVHTERKLTLVFEFLDQDLKKYLDICDNGLEL AVLQSFLYQLLHGVAYCHDHRVLHRDLKPQNLLINRDGELKLADFGLARA FGIPVRSYTHEVVTLWYRAPDVLMGSRKYSTPVDIWSIGCIFAEMANGRP LFAGASESDQLDRIFRALGTPTEAVYPGIVELPEFQKVKAQFPRYQSLES WASLVPTLPPLGIDLISKMLTFDPSKRISARDALAHAFFGEIHAHGHVHI QQGMGVGGRGGEEGGGGGGGPPSSSAVPSSAAAVP* back to topmRNA from alignment at scaffold_18:280142..282011+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6612 ID=mRNA_6612|Name=jgi.p|Nanoce1779_2|122923|organism=Nannochloropsis oceanica|type=mRNA|length=1870bp|location=Sequence derived from alignment at scaffold_18:280142..282011+ (Nannochloropsis oceanica) ATTGCACTTGTTCAGTGCTACTGTGTGCACTAGGGCATTTGGACGGGGTC
GTATGACGCGGCGAAGTGGTCGCCATTGCCGCGTCGACCTCCCCTCTTAT
CCATGCAAGTTTGCTCTCATCATCTCCTCGGCTTCCTGTCCAGCTGGGAT
GCGTTTGCCTCCAAGGACAATTGACGGCGTCCTCAAGTAGACATGTTATG
ATGGGTTTGAACATTTTTCATGATCGTGGGATGGCTTGCTGTATCATGGT
CTCGATCTAGCACCCTCATCTTCCACAACCACACACACAGGCCCCTGGTT
GGATTCCGGGTCGCCGGTCCTCGTCGATTCTTCCTTGCCCGGTGACGCCC
GCTCTTCCTCCAGTCACACACATCCGCCTCCGCAACCGAGCGCTAATACT
TCACCAATTAAAAAGAAGGTTCACCTCGCCATCCTCACGTGCTATTCTAG
ACACAGTTCCACAAAATCAACCTTACGACTATCATTACAAATCATCCCCT
CCTCTCGGCCTGGACAAGAGCCTCGGCAGCAAACACCCCTGACACGCCTC
AATGGAGCGGTACCAGAAATTGGAAAAGATAGGGGAAGGCACATACGGGG
TGGTGTACAAGGCCAAGGACCGGGTGACCAATGAGGTCGTCGCTTTGAAA
AAGATCCGCCTGGAAGCCGAAGACGAAGGCATTCCTTCCACGGCCATCCG
GGAGATTTCCCTGCTCAAAGAGCTACAACACCCCAATATCGTACGCTTAT
ACGACGTAGTTCACACAGAGCGCAAGCTTACATTGGTATTCGAATTTCTC
GACCAAGACCTGAAAAAATACCTAGACATATGCGACAATGGCCTCGAGCT
CGCCGTCCTTCAGTCCTTCCTCTACCAGCTCCTCCACGGCGTCGCCTACT
GCCACGACCACCGCGTGCTCCATCGGGATTTGAAACCTCAAAATCTTCTC
ATCAATCGCGACGGTGAATTAAAGCTGGCTGATTTTGGCTTGGCTCGTGC
GTTCGGCATCCCTGTCCGAAGCTACACCCACGAGGTGGTGACGCTCTGGT
ACCGTGCCCCCGACGTGTTGATGGGCTCTAGGAAATACAGCACTCCGGTG
GATATCTGGTCGATTGGCTGCATTTTTGCTGAGATGGCTAACGGACGGCC
ATTGTTTGCGGGGGCCTCGGAGAGTGATCAATTGGATAGGTGAGGAGGGA
GGAAAGGAGGGAGGGAGGAAGGGAGGAAAGGAGCATTTGCCGACGGTGAT
CCACCATCTCTTGAAGATATTCTCGGGTCTTGCAGATCTGATTCCCACAC
ACGAATTCCTATTCCTCATTTTTTTGTTCCTTTCCCCTCCCCGTCTTGCA
ATAGAATTTTTCGCGCCCTTGGCACGCCCACCGAGGCCGTCTACCCTGGT
ATAGTGGAGCTGCCGGAATTTCAAAAAGTCAAAGCACAATTTCCACGTTA
TCAATCCCTGGAGTCCTGGGCGAGTTTAGTGCCGACGTTACCGCCGTTGG
GGATCGATTTGATCAGTAAGATGTTGACATTTGACCCGTCGAAGAGGATA
TCAGCGAGAGATGCCTTGGCCCATGCCTTCTTTGGGGAGATCCATGCGCA
TGGCCATGTGCATATACAGCAGGGAATGGGGGTTGGTGGAAGGGGGGGAG
AAGAAGGAGGAGGAGGGGGGGGGGGTCCACCATCATCATCAGCAGTTCCA
TCATCAGCAGCAGCAGTTCCATAATCACCATCATCACCACCATCATCAAC
AACAGCAGCAACAGCAGATCCAGCAGCAAATCCAACTGCAGCCAATGATG
AATGCGCACATTTATGGCGCCCAAGCACAACATCAATCTCACCACAGCCA
CCATCATCAGCATCCATCAC back to topCoding sequence (CDS) from alignment at scaffold_18:280142..282011+ >mRNA_6612 ID=mRNA_6612|Name=jgi.p|Nanoce1779_2|122923|organism=Nannochloropsis oceanica|type=CDS|length=2016bp|location=Sequence derived from alignment at scaffold_18:280142..282011+ (Nannochloropsis oceanica) ATGGAGCGGTACCAGAAATTGGAAAAGATAGGGGAAGGCACATACGGGGT GGTGTACAAGGCCAAGGACCGGGTGACCAATGAGGTCGTCGCTTTGAAAA AGATCCGCCTGGAAGCCGAAGACGAAGGCATTCCTTCCACGGCCATCCGG GAGATTTCCCTGCTCAAAGAGCTACAACACCCCAATATCGTACGCTTATA CGACGTAGTTCACACAGAGCGCAAGCTTACATTGGTATTCGAATTTCTCG ACCAAGACCTGAAAAAATACCTAGACATATGCGACAATGGCCTCGAGCTC GCCGTCCTTCAGTCCTTCCTCTACCAGCTCCTCCACGGCGTCGCCTACTG CCACGACCACCGCGTGCTCCATCGGGATTTGAAACCTCAAAATCTTCTCA TCAATCGCGACGGTGAATTAAAGCTGGCTGATTTTGGCTTGGCTCGTGCG TTCGGCATCCCTGTCCGAAGCTACACCCACGAGGTGGTGACGCTCTGGTA CCGTGCCCCCGACGTGTTGATGGGCTCTAGGAAATACAGCACTCCGGTGG ATATCTGGTCGATTGGCTGCATTTTTGCTGAGATGGCTAACGGACGGCCA TTGTTTGCGGGGGCCTCGGAGAGTGATCAATTGGATAGAATTTTTCGCGC CCTTGGCACGCCCACCGAGGCCGTCTACCCTGGTATAGTGGAGCTGCCGG AATTTCAAAAAGTCAAAGCACAATTTCCACGTTATCAATCCCTGGAGTCC TGGGCGAGTTTAGTGCCGACGTTACCGCCGTTGGGGATCGATTTGATCAG TAAGATGTTGACATTTGACCCGTCGAAGAGGATATCAGCGAGAGATGCCT TGGCCCATGCCTTCTTTGGGGAGATCCATGCGCATGGCCATGTGCATATA CAGCAGGGAATGGGGGTTGGTGGAAGGGGGGGAGAAGAAGGAGGAGGAGG GGGGGGGGGTCCACCATCATCATCAGCAGTTCCATCATCAGCAGCAGCAG TTCCATAAATGGAGCGGTACCAGAAATTGGAAAAGATAGGGGAAGGCACA TACGGGGTGGTGTACAAGGCCAAGGACCGGGTGACCAATGAGGTCGTCGC TTTGAAAAAGATCCGCCTGGAAGCCGAAGACGAAGGCATTCCTTCCACGG CCATCCGGGAGATTTCCCTGCTCAAAGAGCTACAACACCCCAATATCGTA CGCTTATACGACGTAGTTCACACAGAGCGCAAGCTTACATTGGTATTCGA ATTTCTCGACCAAGACCTGAAAAAATACCTAGACATATGCGACAATGGCC TCGAGCTCGCCGTCCTTCAGTCCTTCCTCTACCAGCTCCTCCACGGCGTC GCCTACTGCCACGACCACCGCGTGCTCCATCGGGATTTGAAACCTCAAAA TCTTCTCATCAATCGCGACGGTGAATTAAAGCTGGCTGATTTTGGCTTGG CTCGTGCGTTCGGCATCCCTGTCCGAAGCTACACCCACGAGGTGGTGACG CTCTGGTACCGTGCCCCCGACGTGTTGATGGGCTCTAGGAAATACAGCAC TCCGGTGGATATCTGGTCGATTGGCTGCATTTTTGCTGAGATGGCTAACG GACGGCCATTGTTTGCGGGGGCCTCGGAGAGTGATCAATTGGATAGAATT TTTCGCGCCCTTGGCACGCCCACCGAGGCCGTCTACCCTGGTATAGTGGA GCTGCCGGAATTTCAAAAAGTCAAAGCACAATTTCCACGTTATCAATCCC TGGAGTCCTGGGCGAGTTTAGTGCCGACGTTACCGCCGTTGGGGATCGAT TTGATCAGTAAGATGTTGACATTTGACCCGTCGAAGAGGATATCAGCGAG AGATGCCTTGGCCCATGCCTTCTTTGGGGAGATCCATGCGCATGGCCATG TGCATATACAGCAGGGAATGGGGGTTGGTGGAAGGGGGGGAGAAGAAGGA GGAGGAGGGGGGGGGGGTCCACCATCATCATCAGCAGTTCCATCATCAGC AGCAGCAGTTCCATAA back to top
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