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Properties
| Property Name | Value |
|---|
| TranscriptId | 597507 |
| Track | FilteredModels2 |
| ProteinId | 597421 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:220274..221395 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6592 ID=mRNA_6592|Name=jgi.p|Nanoce1779_2|597421|organism=Nannochloropsis oceanica|type=mRNA|length=1021bp
ACAGCAAATACAGCCAGCACGCCCCTCCGCCAGACCACACTACAACTAGC
CAAACCATCACCATGACAACAATTCGCTTCGTGGCCACGTCGGTAATGTC
GTCCGACGACGGGCTCTCCTACAAAACCGAGCAGCTCGAGGACGAGGAGG
CGCACAAAAAGCGCCTGGATAAGGAAAAGGCTGCGCATGGGCGCACGTTA
TGGGAGCAGTTGGAAGAGCAAAAGGACAAGAAAAAAGCTGAATACGACGC
GGTGACCAAACAGATCTTTGCTCCCCCCAAAGCCCTCGACGAAGCAGAAG
CCTCATACCTGCAAGGAATTTTAGAGCAAGAAAAGATGCGAGATCGCCGT
CGGGCCGAGGAGGAAGAGAGGGAGTTGGCGGCGTTTTCGTTGGCAAGGGC
GAATCGGGACTTGGGCTCGAATGGGGAGGAAATGGTGGCGGGGGGTGGGA
AGGTGTCACCAAGAGAAGGAGCAGGAGCAAGAGGAGGAGCGGCAACAAGA
GAGGAGACAGGTGGTAGTACGGGTGGAGGTGGAAACAGCAGCAACGGAAA
CAAGAGCTTTCCGGATGTGAAAATCAGTGCGAAGATTAAGCGGAAGGAGA
AGAGCAGTAAGGAGGGGGGCAAAGAAGGGAAGGAGGACAAGGATAGCAGC
AGCCACCACAAGAGGCATAAGAAGGAAGACAAGACCAATAAGGAGGCATC
TACGGCGACCTCAGCAGTAGCATCAGCAGCACCATCAGCACCAGCAGCAC
CAGCAGCACCAGCAAAGCCAGAAGTACCGGCAACAGCAGCAGCAAATTCA
CTGGCCATGTTGGCAGCCTATGACAGCGACGAAGAAGAGGATTAACAAAC
AAAAATGAAGCAAGGGGAAGAGTAGGGAAAAGAAGGTAGAAGAGAAAAGG
AGAGGCACACAGAGAAAAAGACGGGAACGGACTAATGACCTCCCAAAGGA
GGAGCAGATTGTACATAGCAAGTATAGAAAGGGAAGGAGCGAGCAAATGG
AAGTATGGTTTGTTTGTTTTG back to topprotein sequence of jgi.p|Nanoce1779_2|597421 >mRNA_6592-protein ID=mRNA_6592-protein|Name=jgi.p|Nanoce1779_2|597421|organism=Nannochloropsis oceanica|type=polypeptide|length=261bp
MTTIRFVATSVMSSDDGLSYKTEQLEDEEAHKKRLDKEKAAHGRTLWEQL
EEQKDKKKAEYDAVTKQIFAPPKALDEAEASYLQGILEQEKMRDRRRAEE
EERELAAFSLARANRDLGSNGEEMVAGGGKVSPREGAGARGGAATREETG
GSTGGGGNSSNGNKSFPDVKISAKIKRKEKSSKEGGKEGKEDKDSSSHHK
RHKKEDKTNKEASTATSAVASAAPSAPAAPAAPAKPEVPATAAANSLAML
AAYDSDEEED* back to topmRNA from alignment at scaffold_18:220274..221395- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6592 ID=mRNA_6592|Name=jgi.p|Nanoce1779_2|597421|organism=Nannochloropsis oceanica|type=mRNA|length=1122bp|location=Sequence derived from alignment at scaffold_18:220274..221395- (Nannochloropsis oceanica)
ACAGCAAATACAGCCAGCACGCCCCTCCGCCAGACCACACTACAACTAGC
CAAACCATCACCATGACAACAATTCGCTTCGTGGCCACGTCGGTAATGTC
GTCCGACGACGGGGTATGTAGCCCAAGCCTCCCTCCCTCCCCTCCCCCCT
CCTTCTCACCTTCCTCCTTCCTCACTCCTCACTTTTCATCTCCTCTCCAC
CACATTTTCCATAGCTCTCCTACAAAACCGAGCAGCTCGAGGACGAGGAG
GCGCACAAAAAGCGCCTGGATAAGGAAAAGGCTGCGCATGGGCGCACGTT
ATGGGAGCAGTTGGAAGAGCAAAAGGACAAGAAAAAAGCTGAATACGACG
CGGTGACCAAACAGATCTTTGCTCCCCCCAAAGCCCTCGACGAAGCAGAA
GCCTCATACCTGCAAGGAATTTTAGAGCAAGAAAAGATGCGAGATCGCCG
TCGGGCCGAGGAGGAAGAGAGGGAGTTGGCGGCGTTTTCGTTGGCAAGGG
CGAATCGGGACTTGGGCTCGAATGGGGAGGAAATGGTGGCGGGGGGTGGG
AAGGTGTCACCAAGAGAAGGAGCAGGAGCAAGAGGAGGAGCGGCAACAAG
AGAGGAGACAGGTGGTAGTACGGGTGGAGGTGGAAACAGCAGCAACGGAA
ACAAGAGCTTTCCGGATGTGAAAATCAGTGCGAAGATTAAGCGGAAGGAG
AAGAGCAGTAAGGAGGGGGGCAAAGAAGGGAAGGAGGACAAGGATAGCAG
CAGCCACCACAAGAGGCATAAGAAGGAAGACAAGACCAATAAGGAGGCAT
CTACGGCGACCTCAGCAGTAGCATCAGCAGCACCATCAGCACCAGCAGCA
CCAGCAGCACCAGCAAAGCCAGAAGTACCGGCAACAGCAGCAGCAAATTC
ACTGGCCATGTTGGCAGCCTATGACAGCGACGAAGAAGAGGATTAACAAA
CAAAAATGAAGCAAGGGGAAGAGTAGGGAAAAGAAGGTAGAAGAGAAAAG
GAGAGGCACACAGAGAAAAAGACGGGAACGGACTAATGACCTCCCAAAGG
AGGAGCAGATTGTACATAGCAAGTATAGAAAGGGAAGGAGCGAGCAAATG
GAAGTATGGTTTGTTTGTTTTG back to topCoding sequence (CDS) from alignment at scaffold_18:220274..221395- >mRNA_6592 ID=mRNA_6592|Name=jgi.p|Nanoce1779_2|597421|organism=Nannochloropsis oceanica|type=CDS|length=1566bp|location=Sequence derived from alignment at scaffold_18:220274..221395- (Nannochloropsis oceanica)
CTCTCCTACAAAACCGAGCAGCTCGAGGACGAGGAGGCGCACAAAAAGCG
CCTGGATAAGGAAAAGGCTGCGCATGGGCGCACGTTATGGGAGCAGTTGG
AAGAGCAAAAGGACAAGAAAAAAGCTGAATACGACGCGGTGACCAAACAG
ATCTTTGCTCCCCCCAAAGCCCTCGACGAAGCAGAAGCCTCATACCTGCA
AGGAATTTTAGAGCAAGAAAAGATGCGAGATCGCCGTCGGGCCGAGGAGG
AAGAGAGGGAGTTGGCGGCGTTTTCGTTGGCAAGGGCGAATCGGGACTTG
GGCTCGAATGGGGAGGAAATGGTGGCGGGGGGTGGGAAGGTGTCACCAAG
AGAAGGAGCAGGAGCAAGAGGAGGAGCGGCAACAAGAGAGGAGACAGGTG
GTAGTACGGGTGGAGGTGGAAACAGCAGCAACGGAAACAAGAGCTTTCCG
GATGTGAAAATCAGTGCGAAGATTAAGCGGAAGGAGAAGAGCAGTAAGGA
GGGGGGCAAAGAAGGGAAGGAGGACAAGGATAGCAGCAGCCACCACAAGA
GGCATAAGAAGGAAGACAAGACCAATAAGGAGGCATCTACGGCGACCTCA
GCAGTAGCATCAGCAGCACCATCAGCACCAGCAGCACCAGCAGCACCAGC
AAAGCCAGAAGTACCGGCAACAGCAGCAGCAAATTCACTGGCCATGTTGG
CAGCCTATGACAGCGACGAAGAAGAGGATTAAATGACAACAATTCGCTTC
GTGGCCACGTCGGTAATGTCGTCCGACGACGGGCTCTCCTACAAAACCGA
GCAGCTCGAGGACGAGGAGGCGCACAAAAAGCGCCTGGATAAGGAAAAGG
CTGCGCATGGGCGCACGTTATGGGAGCAGTTGGAAGAGCAAAAGGACAAG
AAAAAAGCTGAATACGACGCGGTGACCAAACAGATCTTTGCTCCCCCCAA
AGCCCTCGACGAAGCAGAAGCCTCATACCTGCAAGGAATTTTAGAGCAAG
AAAAGATGCGAGATCGCCGTCGGGCCGAGGAGGAAGAGAGGGAGTTGGCG
GCGTTTTCGTTGGCAAGGGCGAATCGGGACTTGGGCTCGAATGGGGAGGA
AATGGTGGCGGGGGGTGGGAAGGTGTCACCAAGAGAAGGAGCAGGAGCAA
GAGGAGGAGCGGCAACAAGAGAGGAGACAGGTGGTAGTACGGGTGGAGGT
GGAAACAGCAGCAACGGAAACAAGAGCTTTCCGGATGTGAAAATCAGTGC
GAAGATTAAGCGGAAGGAGAAGAGCAGTAAGGAGGGGGGCAAAGAAGGGA
AGGAGGACAAGGATAGCAGCAGCCACCACAAGAGGCATAAGAAGGAAGAC
AAGACCAATAAGGAGGCATCTACGGCGACCTCAGCAGTAGCATCAGCAGC
ACCATCAGCACCAGCAGCACCAGCAGCACCAGCAAAGCCAGAAGTACCGG
CAACAGCAGCAGCAAATTCACTGGCCATGTTGGCAGCCTATGACAGCGAC
GAAGAAGAGGATTAAATGACAACAATTCGCTTCGTGGCCACGTCGGTAAT
GTCGTCCGACGACGGG back to top
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