Properties
Property Name | Value |
TranscriptId | 531285 |
Track | FilteredModels2 |
ProteinId | 531199 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_18 | supercontig | scaffold_18:217285..219594 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6590 ID=mRNA_6590|Name=jgi.p|Nanoce1779_2|531199|organism=Nannochloropsis oceanica|type=mRNA|length=2205bp ATGGGTCGATGGCAGCGGCGGCAGGTTTCTCTGAGGGACACCAGGCGCCG GGCTTCGGAGAAGGAGGAGGAGGAAGTGAGGGAGGAGGAGGCGGTGGCGA GGTGTTGTGTCGCATTTCTCGCTGACATGACTTTCCTTGGGGCGGCGACA CCACCAGCAGGAGGAGAGCGAGAGAGAGGGGAAGGGAGGGAGCTGCCAGT GGGGTCGTATTTGGGGGTGTGTGAAGCGTTGGCTTACACTCTGGCCGTGG CTCAAGCGGAGTCGGGGCATGCCTTAAGAGGGGGCGGGAGGGAGGAAGGG TTGAGGAGTAGCTGCAGCAGTGGGGGGGGTGTGGGGGGTGGAGGGAGCAG CAGTAGTAACAGTGACGCGGCGATGGTCGCGAGGTTGGAGGCCTTGCTTC GGGTGCTCGGTCATATGACCCGTCCTCCCCTCCCTCCTCTCCTCCTTCCT CCTCCATCTCGCTCGACCGAGGGGGTTGAACTGATGCCAGAGGGGGAGGA GGGAGCAGGGGAGGGAGCTGGGGAGCTAGCACAGCAACACCGAAAGCGCC GTCGTGGGGGGGGGGGAGGGGCGCGTGTGGGTAAAGGCAGCAGTGGCAGG AGGCGGAGATGGGTGAGGGGGAAGAAGGACGTGCATCCTCGGGTTAAATT AGCGGGGCCATTGGCTCGCTTGTTGTTGGGCGGAGGGAGCTCTTTGAACG CCGGGAGGGGGTCCTCGTCTTTGCTGTGTTTGAGCGAGCCTCTTCTATCC CAGAATATCTGGTGTTTCTTCGTAGCAGTGGCCGTGGACCAGACCTTCTT CTCCTCGCCCTCGCCCTCTATCGCCTCCTCCTCCGAGTGTGCTCAAGGAA GGGGAGGAGGGAGGGAAGGAGGGAAGGAGGATCTGATGGGAGGCTTGATC CGGGCGTTGTACGTGGCGAGAATCTTGCAGGTGCTTTGGGACACGGGAGG AATATTCAAGCTCAGCAGCGGCAGCAGAAGTAGCAGAGATGGCATCAGCA GTAGGGAAGAGGAAGAAGCGTCTCTCATGAAGGAGATCCGTGAGACTTTG TCTGTCGGAGAACGGGACGACACCCACCCCTCGTCGTTCTCTGCCTCCAT CTCCCCCTTCCTTCCCTCTTATCCTCCTGGAGACGTGGAGGAGCTGGTCG AGATGAGTGCCTGGGGTCTAGCGTTGGGGCGGATGATGGACTCCCATGCT GTCATGACTTTGACCGTGCCGGAAGCGAAGGAGAGACTGGGTTGGCGGCA AGCGAGGAAAAGGCTCGAGATGGTGGGGAATGCGGGAGGGGCTTTCCTGG AGTGTGTGACGTTGTTTTTACGACTAGTGGCATTACATGAAGGGGAGGAG GAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGGAGGGGT GGAGGAGGGAAGGCGGGAGAGAAGGGAAGGGGTACGACGGGTGCCGATGG GGTGGCGTCCGCCTGATGCTGCTGCGTCTACTGCAGATTTGAAGGCAGTC TTGGGGATCCCCTCGTTTGCGATGCTACTGCAAGAGCAAGAAGGAGGATG GACACGGTTCGCTACCACCTGGCTCTCAGAATGGGGCCAACGCTTCTCCT CCTCCTCCTCCTCCTCCTCCACTGCGTCCTCCCTCTCTTCCTCCCTTCGT CGCTCTCTCGATTTTCCCGTGTGGGCCGCACCCTGTTTTGTCCTCCTTAA AAAGTCCTACACTGAACTCCACTCAGAATTGACCACACGCGTGATAGAGG CCAAGGCCCGCGCTTCTGCTGCTGCTGCCGCTGCTGCTGCTGCTGCTGGT GGTGGTACCCGTAGTCCTCTGATGTTTTCGGGTACTGGAGGAAGAGGTGC CATGGGAGTGACAGTTGAGAATCCGGTGGTATGCTTAGTGTGCAACGCGG CGCTGGAGGCAGGGCATGGACGATGCACGCGGCATGCGCAGGAGTGTGGG AGGGGGGTGGGAGTGTTCTTCCTGCTGCAGGATTGCTCCGTGTTACTGAT TTATGGGGATCGTGCGTGTTATTTTGCCAGTCCATACGTGGATGCGTACG GCGAGAGGCACAAACAGTTCCGCGGTCGGCCGTTAAATTTGGATGAGCGG CGATTGGAGGCTTTGAGGAGGGTGTGGGCACGGCAAAGGGTGCCGTATGA GGTGGTGCACTCGAGGAGCACGAGCAAGCATGTAATTTTAAGGAACTATT ATTAG back to topprotein sequence of jgi.p|Nanoce1779_2|531199 >mRNA_6590-protein ID=mRNA_6590-protein|Name=jgi.p|Nanoce1779_2|531199|organism=Nannochloropsis oceanica|type=polypeptide|length=735bp MGRWQRRQVSLRDTRRRASEKEEEEVREEEAVARCCVAFLADMTFLGAAT PPAGGERERGEGRELPVGSYLGVCEALAYTLAVAQAESGHALRGGGREEG LRSSCSSGGGVGGGGSSSSNSDAAMVARLEALLRVLGHMTRPPLPPLLLP PPSRSTEGVELMPEGEEGAGEGAGELAQQHRKRRRGGGGGARVGKGSSGR RRRWVRGKKDVHPRVKLAGPLARLLLGGGSSLNAGRGSSSLLCLSEPLLS QNIWCFFVAVAVDQTFFSSPSPSIASSSECAQGRGGGREGGKEDLMGGLI RALYVARILQVLWDTGGIFKLSSGSRSSRDGISSREEEEASLMKEIRETL SVGERDDTHPSSFSASISPFLPSYPPGDVEELVEMSAWGLALGRMMDSHA VMTLTVPEAKERLGWRQARKRLEMVGNAGGAFLECVTLFLRLVALHEGEE EQEEQEEQEEQEEQGGVEEGRRERREGVRRVPMGWRPPDAAASTADLKAV LGIPSFAMLLQEQEGGWTRFATTWLSEWGQRFSSSSSSSSTASSLSSSLR RSLDFPVWAAPCFVLLKKSYTELHSELTTRVIEAKARASAAAAAAAAAAG GGTRSPLMFSGTGGRGAMGVTVENPVVCLVCNAALEAGHGRCTRHAQECG RGVGVFFLLQDCSVLLIYGDRACYFASPYVDAYGERHKQFRGRPLNLDER RLEALRRVWARQRVPYEVVHSRSTSKHVILRNYY* back to topmRNA from alignment at scaffold_18:217285..219594+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6590 ID=mRNA_6590|Name=jgi.p|Nanoce1779_2|531199|organism=Nannochloropsis oceanica|type=mRNA|length=2310bp|location=Sequence derived from alignment at scaffold_18:217285..219594+ (Nannochloropsis oceanica) ATGGGTCGATGGCAGCGGCGGCAGGTTTCTCTGAGGGACACCAGGCGCCG
GGCTTCGGAGAAGGAGGAGGAGGAAGTGAGGGAGGAGGAGGCGGTGGCGA
GGTGTTGTGTCGCATTTCTCGCTGACATGACTTTCCTTGGGGCGGCGACA
CCACCAGCAGGAGGAGAGCGAGAGAGAGGGGAAGGGAGGGAGCTGCCAGT
GGGGTCGTATTTGGGGGTGTGTGAAGCGTTGGCTTACACTCTGGCCGTGG
CTCAAGCGGAGTCGGGGCATGCCTTAAGAGGGGGCGGGAGGGAGGAAGGG
TTGAGGAGTAGCTGCAGCAGTGGGGGGGGTGTGGGGGGTGGAGGGAGCAG
CAGTAGTAACAGTGACGCGGCGATGGTCGCGAGGTTGGAGGCCTTGCTTC
GGGTGCTCGGTCATATGACCCGTCCTCCCCTCCCTCCTCTCCTCCTTCCT
CCTCCATCTCGCTCGACCGAGGGGGTTGAACTGATGCCAGAGGGGGAGGA
GGGAGCAGGGGAGGGAGCTGGGGAGCTAGCACAGCAACACCGAAAGCGCC
GTCGTGGGGGGGGGGGAGGGGCGCGTGTGGGTAAAGGCAGCAGTGGCAGG
AGGCGGAGATGGGTGAGGGGGAAGAAGGACGTGCATCCTCGGGTTAAATT
AGCGGGGCCATTGGCTCGCTTGTTGTTGGGCGGAGGGAGCTCTTTGAACG
CCGGGAGGGGGTCCTCGTCTTTGCTGTGTTTGAGCGAGCCTCTTCTATCC
CAGAATATCTGGTGTTTCTTCGTAGCAGTGGCCGTGGACCAGACCTTCTT
CTCCTCGCCCTCGCCCTCTATCGCCTCCTCCTCCGAGTGTGCTCAAGGAA
GGGGAGGAGGGAGGGAAGGAGGGAAGGAGGATCTGATGGGAGGCTTGATC
CGGGCGTTGTACGTGGCGAGAATCTTGCAGGTGCTTTGGGACACGGGAGG
AATATTCAAGCTCAGCAGCGGCAGCAGAAGTAGCAGAGATGGCATCAGCA
GTAGGGAAGAGGAAGAAGCGTCTCTCATGAAGGAGATCCGTGAGACTTTG
TCTGTCGGAGAACGGGACGACACCCACCCCTCGTCGTTCTCTGCCTCCAT
CTCCCCCTTCCTTCCCTCTTATCCTCCTGGAGACGTGGAGGAGCTGGTCG
AGATGAGTGCCTGGGGTCTAGCGTTGGGGCGGATGATGGACTCCCATGCT
GTCATGACTTTGACCGTGCCGGAAGCGAAGGAGAGACTGGGTTGGCGGCA
AGCGAGGAAAAGGCTCGAGATGGTGGGGAATGCGGGAGGGGCTTTCCTGG
AGTGTGTGACGTTGTTTTTACGACTAGTGGCATTACATGAAGGGGAGGAG
GAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGGAGGGGT
GGAGGAGGGAAGGCGGGAGAGAAGGGAAGGGGTACGACGGGTGCCGATGG
GGTGGCGTCCGCCTGATGCTGCTGCGTCTACTGCAGATTTGAAGGCAGTC
TTGGGGATCCCCTCGTTTGCGATGCTACTGCAAGAGCAAGAAGGAGGATG
GACACGGTTCGCTACCACCTGGCTCTCAGAATGGGGCCAACGCTTCTCCT
CCTCCTCCTCCTCCTCCTCCACTGCGTCCTCCCTCTCTTCCTCCCTTCGT
CGCTCTCTCGATTTTCCCGTGTGGGCCGCACCCTGTTTTGTCCTCCTTAA
AAAGTCCTACACTGAACTCCACTCAGAATTGACCACACGCGTGATAGAGG
CCAAGGCCCGCGCTTCTGCTGCTGCTGCCGCTGCTGCTGCTGCTGCTGGT
GGTGGTACCCGTAGTCCTCTGATGTTTTCGGGTACTGGAGGAAGAGGTGG
TAGGGAAGGAACGGTAGCTACCCCCCAACAGGCATCTCCTCCTCGTCGCA
CTGAAGGTAATGGGGCTGCTGCAGCTGCTGCTGCTGCCGCTGCTGCTGCT
GAAGCCATGGGAGTGACAGTTGAGAATCCGGTGGTATGCTTAGTGTGCAA
CGCGGCGCTGGAGGCAGGGCATGGACGATGCACGCGGCATGCGCAGGAGT
GTGGGAGGGGGGTGGGAGTGTTCTTCCTGCTGCAGGATTGCTCCGTGTTA
CTGATTTATGGGGATCGTGCGTGTTATTTTGCCAGTCCATACGTGGATGC
GTACGGCGAGAGGCACAAACAGTTCCGCGGTCGGCCGTTAAATTTGGATG
AGCGGCGATTGGAGGCTTTGAGGAGGGTGTGGGCACGGCAAAGGGTGCCG
TATGAGGTGGTGCACTCGAGGAGCACGAGCAAGCATGTAATTTTAAGGAA
CTATTATTAG back to topCoding sequence (CDS) from alignment at scaffold_18:217285..219594+ >mRNA_6590 ID=mRNA_6590|Name=jgi.p|Nanoce1779_2|531199|organism=Nannochloropsis oceanica|type=CDS|length=4410bp|location=Sequence derived from alignment at scaffold_18:217285..219594+ (Nannochloropsis oceanica) ATGGGTCGATGGCAGCGGCGGCAGGTTTCTCTGAGGGACACCAGGCGCCG GGCTTCGGAGAAGGAGGAGGAGGAAGTGAGGGAGGAGGAGGCGGTGGCGA GGTGTTGTGTCGCATTTCTCGCTGACATGACTTTCCTTGGGGCGGCGACA CCACCAGCAGGAGGAGAGCGAGAGAGAGGGGAAGGGAGGGAGCTGCCAGT GGGGTCGTATTTGGGGGTGTGTGAAGCGTTGGCTTACACTCTGGCCGTGG CTCAAGCGGAGTCGGGGCATGCCTTAAGAGGGGGCGGGAGGGAGGAAGGG TTGAGGAGTAGCTGCAGCAGTGGGGGGGGTGTGGGGGGTGGAGGGAGCAG CAGTAGTAACAGTGACGCGGCGATGGTCGCGAGGTTGGAGGCCTTGCTTC GGGTGCTCGGTCATATGACCCGTCCTCCCCTCCCTCCTCTCCTCCTTCCT CCTCCATCTCGCTCGACCGAGGGGGTTGAACTGATGCCAGAGGGGGAGGA GGGAGCAGGGGAGGGAGCTGGGGAGCTAGCACAGCAACACCGAAAGCGCC GTCGTGGGGGGGGGGGAGGGGCGCGTGTGGGTAAAGGCAGCAGTGGCAGG AGGCGGAGATGGGTGAGGGGGAAGAAGGACGTGCATCCTCGGGTTAAATT AGCGGGGCCATTGGCTCGCTTGTTGTTGGGCGGAGGGAGCTCTTTGAACG CCGGGAGGGGGTCCTCGTCTTTGCTGTGTTTGAGCGAGCCTCTTCTATCC CAGAATATCTGGTGTTTCTTCGTAGCAGTGGCCGTGGACCAGACCTTCTT CTCCTCGCCCTCGCCCTCTATCGCCTCCTCCTCCGAGTGTGCTCAAGGAA GGGGAGGAGGGAGGGAAGGAGGGAAGGAGGATCTGATGGGAGGCTTGATC CGGGCGTTGTACGTGGCGAGAATCTTGCAGGTGCTTTGGGACACGGGAGG AATATTCAAGCTCAGCAGCGGCAGCAGAAGTAGCAGAGATGGCATCAGCA GTAGGGAAGAGGAAGAAGCGTCTCTCATGAAGGAGATCCGTGAGACTTTG TCTGTCGGAGAACGGGACGACACCCACCCCTCGTCGTTCTCTGCCTCCAT CTCCCCCTTCCTTCCCTCTTATCCTCCTGGAGACGTGGAGGAGCTGGTCG AGATGAGTGCCTGGGGTCTAGCGTTGGGGCGGATGATGGACTCCCATGCT GTCATGACTTTGACCGTGCCGGAAGCGAAGGAGAGACTGGGTTGGCGGCA AGCGAGGAAAAGGCTCGAGATGGTGGGGAATGCGGGAGGGGCTTTCCTGG AGTGTGTGACGTTGTTTTTACGACTAGTGGCATTACATGAAGGGGAGGAG GAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGGAGGGGT GGAGGAGGGAAGGCGGGAGAGAAGGGAAGGGGTACGACGGGTGCCGATGG GGTGGCGTCCGCCTGATGCTGCTGCGTCTACTGCAGATTTGAAGGCAGTC TTGGGGATCCCCTCGTTTGCGATGCTACTGCAAGAGCAAGAAGGAGGATG GACACGGTTCGCTACCACCTGGCTCTCAGAATGGGGCCAACGCTTCTCCT CCTCCTCCTCCTCCTCCTCCACTGCGTCCTCCCTCTCTTCCTCCCTTCGT CGCTCTCTCGATTTTCCCGTGTGGGCCGCACCCTGTTTTGTCCTCCTTAA AAAGTCCTACACTGAACTCCACTCAGAATTGACCACACGCGTGATAGAGG CCAAGGCCCGCGCTTCTGCTGCTGCTGCCGCTGCTGCTGCTGCTGCTGGT GGTGGTACCCGTAGTCCTCTGATGTTTTCGGGTACTGGAGGAAGAGGTGC CATGGGAGTGACAGTTGAGAATCCGGTGGTATGCTTAGTGTGCAACGCGG CGCTGGAGGCAGGGCATGGACGATGCACGCGGCATGCGCAGGAGTGTGGG AGGGGGGTGGGAGTGTTCTTCCTGCTGCAGGATTGCTCCGTGTTACTGAT TTATGGGGATCGTGCGTGTTATTTTGCCAGTCCATACGTGGATGCGTACG GCGAGAGGCACAAACAGTTCCGCGGTCGGCCGTTAAATTTGGATGAGCGG CGATTGGAGGCTTTGAGGAGGGTGTGGGCACGGCAAAGGGTGCCGTATGA GGTGGTGCACTCGAGGAGCACGAGCAAGCATGTAATTTTAAGGAACTATT ATTAGATGGGTCGATGGCAGCGGCGGCAGGTTTCTCTGAGGGACACCAGG CGCCGGGCTTCGGAGAAGGAGGAGGAGGAAGTGAGGGAGGAGGAGGCGGT GGCGAGGTGTTGTGTCGCATTTCTCGCTGACATGACTTTCCTTGGGGCGG CGACACCACCAGCAGGAGGAGAGCGAGAGAGAGGGGAAGGGAGGGAGCTG CCAGTGGGGTCGTATTTGGGGGTGTGTGAAGCGTTGGCTTACACTCTGGC CGTGGCTCAAGCGGAGTCGGGGCATGCCTTAAGAGGGGGCGGGAGGGAGG AAGGGTTGAGGAGTAGCTGCAGCAGTGGGGGGGGTGTGGGGGGTGGAGGG AGCAGCAGTAGTAACAGTGACGCGGCGATGGTCGCGAGGTTGGAGGCCTT GCTTCGGGTGCTCGGTCATATGACCCGTCCTCCCCTCCCTCCTCTCCTCC TTCCTCCTCCATCTCGCTCGACCGAGGGGGTTGAACTGATGCCAGAGGGG GAGGAGGGAGCAGGGGAGGGAGCTGGGGAGCTAGCACAGCAACACCGAAA GCGCCGTCGTGGGGGGGGGGGAGGGGCGCGTGTGGGTAAAGGCAGCAGTG GCAGGAGGCGGAGATGGGTGAGGGGGAAGAAGGACGTGCATCCTCGGGTT AAATTAGCGGGGCCATTGGCTCGCTTGTTGTTGGGCGGAGGGAGCTCTTT GAACGCCGGGAGGGGGTCCTCGTCTTTGCTGTGTTTGAGCGAGCCTCTTC TATCCCAGAATATCTGGTGTTTCTTCGTAGCAGTGGCCGTGGACCAGACC TTCTTCTCCTCGCCCTCGCCCTCTATCGCCTCCTCCTCCGAGTGTGCTCA AGGAAGGGGAGGAGGGAGGGAAGGAGGGAAGGAGGATCTGATGGGAGGCT TGATCCGGGCGTTGTACGTGGCGAGAATCTTGCAGGTGCTTTGGGACACG GGAGGAATATTCAAGCTCAGCAGCGGCAGCAGAAGTAGCAGAGATGGCAT CAGCAGTAGGGAAGAGGAAGAAGCGTCTCTCATGAAGGAGATCCGTGAGA CTTTGTCTGTCGGAGAACGGGACGACACCCACCCCTCGTCGTTCTCTGCC TCCATCTCCCCCTTCCTTCCCTCTTATCCTCCTGGAGACGTGGAGGAGCT GGTCGAGATGAGTGCCTGGGGTCTAGCGTTGGGGCGGATGATGGACTCCC ATGCTGTCATGACTTTGACCGTGCCGGAAGCGAAGGAGAGACTGGGTTGG CGGCAAGCGAGGAAAAGGCTCGAGATGGTGGGGAATGCGGGAGGGGCTTT CCTGGAGTGTGTGACGTTGTTTTTACGACTAGTGGCATTACATGAAGGGG AGGAGGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGAGGAGCAGGGA GGGGTGGAGGAGGGAAGGCGGGAGAGAAGGGAAGGGGTACGACGGGTGCC GATGGGGTGGCGTCCGCCTGATGCTGCTGCGTCTACTGCAGATTTGAAGG CAGTCTTGGGGATCCCCTCGTTTGCGATGCTACTGCAAGAGCAAGAAGGA GGATGGACACGGTTCGCTACCACCTGGCTCTCAGAATGGGGCCAACGCTT CTCCTCCTCCTCCTCCTCCTCCTCCACTGCGTCCTCCCTCTCTTCCTCCC TTCGTCGCTCTCTCGATTTTCCCGTGTGGGCCGCACCCTGTTTTGTCCTC CTTAAAAAGTCCTACACTGAACTCCACTCAGAATTGACCACACGCGTGAT AGAGGCCAAGGCCCGCGCTTCTGCTGCTGCTGCCGCTGCTGCTGCTGCTG CTGGTGGTGGTACCCGTAGTCCTCTGATGTTTTCGGGTACTGGAGGAAGA GGTGCCATGGGAGTGACAGTTGAGAATCCGGTGGTATGCTTAGTGTGCAA CGCGGCGCTGGAGGCAGGGCATGGACGATGCACGCGGCATGCGCAGGAGT GTGGGAGGGGGGTGGGAGTGTTCTTCCTGCTGCAGGATTGCTCCGTGTTA CTGATTTATGGGGATCGTGCGTGTTATTTTGCCAGTCCATACGTGGATGC GTACGGCGAGAGGCACAAACAGTTCCGCGGTCGGCCGTTAAATTTGGATG AGCGGCGATTGGAGGCTTTGAGGAGGGTGTGGGCACGGCAAAGGGTGCCG TATGAGGTGGTGCACTCGAGGAGCACGAGCAAGCATGTAATTTTAAGGAA CTATTATTAG back to top
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