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Properties
| Property Name | Value |
|---|
| TranscriptId | 597476 |
| Track | FilteredModels2 |
| ProteinId | 597390 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:191546..193125 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6579 ID=mRNA_6579|Name=jgi.p|Nanoce1779_2|597390|organism=Nannochloropsis oceanica|type=mRNA|length=1580bp
AGCAGGAGGAGGAGAAGAAGAAGGAGGGGGGGGAGCGGCAGCAGAAGCGC
CTGCAGCGGCAGCACATTCAGGGGCTGGGCGACGGACCCGTCAAATCCAG
GGAGCAGCAGCAGCAGCAGCAGCAGGAGGAGCAGCGGCAAATGCAGTAGG
AGAGGAAGATTTGGAAGAGGTTGAGGACACGACCAAAGGGCAGGCTGGTG
GGACGGAAGCCGCGTATAAACGCAAACAATCCGAATGGATCGCCCGTGCC
TTAAGGTCGGAAAAAGATCCGCGCGTCTGCATGGCCTTGGAAACGCTGCA
ATCTCTTAACCACGCCATTGCCCAGAGCAAGGCCTCCTACGAACACGACG
TATTAAAACTCCAACAACGTCGGGCGTTGCGTGACGCTGGGGCAGCGGAA
GTGCTCTCTCCGTTGCTGCAAGAGGGGAAGGATACGGTGCGAAAAATGGA
GGAGCAAGAGAGGGGTATGTCGGAGGATGTTCAAAGTTGCTTAATGATGG
TTGTGGAGAGCTTGGGGGAGAAAGCTATTATTCTAAATGAACACCATCGC
TTGGCACGTCTGCAGAAGGTGGTGGCTGCGAGGGTGAGGAACTTCCGCAC
CCGTGTGGCGGAAAAGGGGGCGATGGCCCTGGAGGAGGAAAAGGCGAGGG
CAGGGAAGGAGGTGGAAGTAGAGGGGGAGAGATTAAAGGAGGAATTGGCG
GGAATTGAGGAGGAGATTAAGGATCTGAATGAACATTTTGCACGAGAAAG
GCCACGGATGGAGCAGAAGTTGAGGGTATTGCAGGCGGCATTGGAGAGAA
GGAAGGAGGGGTTGAGTAGGGAGAAGAGACGGTATCGCCTTGATAAAGAG
GGATGGGAGAATGAAGCGAGGCTCTTGGCGGCTTCGGTAATGAAAGCGAC
GAAACTGGAGGAGAAGCTAAATGTGGAAAAGAGGGCAGCTGCTAAGGAGG
CGATAAGAGAGCGGGCGGAGGTGGAGAAGGAAGAGGAGGATGAGGAGAAG
GAGATACGTGGGGCAGAGGAGAGTGAAGGGAGGGTAGAAGGGGGCGAAGA
GGACGAGGAGGAAGATGACGAAAACTTGGAGGAATTGGCGGATTTGATGT
TTCAGCTGGAGTTGCTCATGTCCAAGGAGGGACACTTGGAGGAATAGGAG
GAGGGCTTGGAGTGAGGAGGAAAAAATGATGAAGAGAGAAATAGCGTTTG
TATGTGCGTATAAATGTCTGTGCCCATAGTTGATTAAAAAAAGGCTACTC
AGCAAGACCGCAAGAAGAAGCATGTAATGGCCAAGACAAAATAAACTGGG
AAGGCAAAAATCATCTCTATCTGTTATTTGACTTTCAAGTTTTCATATGC
TGTTCAGTGTATGAGTTGGTCGGCTCGTTACCATATCATTATCGGCAATT
TAATATGCATGCACAGACACGAATAAAGTAACACTTTCTTAATCTGCCTT
TACAAATCTTTTTCCTCCTCGTTTTCTTCTTCCTCCTTCTCCTCCTCCTT
CTCCTTCTCCTCGTCGTCGTCCTCCTCCCCTTTCTCCCCCCCCCACTTTC
TCCTCCTTCTCCCCCCCCACCTTCCTCATT back to topprotein sequence of jgi.p|Nanoce1779_2|597390 >mRNA_6579-protein ID=mRNA_6579-protein|Name=jgi.p|Nanoce1779_2|597390|organism=Nannochloropsis oceanica|type=polypeptide|length=289bp
MALETLQSLNHAIAQSKASYEHDVLKLQQRRALRDAGAAEVLSPLLQEGK
DTVRKMEEQERGMSEDVQSCLMMVVESLGEKAIILNEHHRLARLQKVVAA
RVRNFRTRVAEKGAMALEEEKARAGKEVEVEGERLKEELAGIEEEIKDLN
EHFARERPRMEQKLRVLQAALERRKEGLSREKRRYRLDKEGWENEARLLA
ASVMKATKLEEKLNVEKRAAAKEAIRERAEVEKEEEDEEKEIRGAEESEG
RVEGGEEDEEEDDENLEELADLMFQLELLMSKEGHLEE* back to topmRNA from alignment at scaffold_18:191546..193125- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6579 ID=mRNA_6579|Name=jgi.p|Nanoce1779_2|597390|organism=Nannochloropsis oceanica|type=mRNA|length=1580bp|location=Sequence derived from alignment at scaffold_18:191546..193125- (Nannochloropsis oceanica)
AGCAGGAGGAGGAGAAGAAGAAGGAGGGGGGGGAGCGGCAGCAGAAGCGC
CTGCAGCGGCAGCACATTCAGGGGCTGGGCGACGGACCCGTCAAATCCAG
GGAGCAGCAGCAGCAGCAGCAGCAGGAGGAGCAGCGGCAAATGCAGTAGG
AGAGGAAGATTTGGAAGAGGTTGAGGACACGACCAAAGGGCAGGCTGGTG
GGACGGAAGCCGCGTATAAACGCAAACAATCCGAATGGATCGCCCGTGCC
TTAAGGTCGGAAAAAGATCCGCGCGTCTGCATGGCCTTGGAAACGCTGCA
ATCTCTTAACCACGCCATTGCCCAGAGCAAGGCCTCCTACGAACACGACG
TATTAAAACTCCAACAACGTCGGGCGTTGCGTGACGCTGGGGCAGCGGAA
GTGCTCTCTCCGTTGCTGCAAGAGGGGAAGGATACGGTGCGAAAAATGGA
GGAGCAAGAGAGGGGTATGTCGGAGGATGTTCAAAGTTGCTTAATGATGG
TTGTGGAGAGCTTGGGGGAGAAAGCTATTATTCTAAATGAACACCATCGC
TTGGCACGTCTGCAGAAGGTGGTGGCTGCGAGGGTGAGGAACTTCCGCAC
CCGTGTGGCGGAAAAGGGGGCGATGGCCCTGGAGGAGGAAAAGGCGAGGG
CAGGGAAGGAGGTGGAAGTAGAGGGGGAGAGATTAAAGGAGGAATTGGCG
GGAATTGAGGAGGAGATTAAGGATCTGAATGAACATTTTGCACGAGAAAG
GCCACGGATGGAGCAGAAGTTGAGGGTATTGCAGGCGGCATTGGAGAGAA
GGAAGGAGGGGTTGAGTAGGGAGAAGAGACGGTATCGCCTTGATAAAGAG
GGATGGGAGAATGAAGCGAGGCTCTTGGCGGCTTCGGTAATGAAAGCGAC
GAAACTGGAGGAGAAGCTAAATGTGGAAAAGAGGGCAGCTGCTAAGGAGG
CGATAAGAGAGCGGGCGGAGGTGGAGAAGGAAGAGGAGGATGAGGAGAAG
GAGATACGTGGGGCAGAGGAGAGTGAAGGGAGGGTAGAAGGGGGCGAAGA
GGACGAGGAGGAAGATGACGAAAACTTGGAGGAATTGGCGGATTTGATGT
TTCAGCTGGAGTTGCTCATGTCCAAGGAGGGACACTTGGAGGAATAGGAG
GAGGGCTTGGAGTGAGGAGGAAAAAATGATGAAGAGAGAAATAGCGTTTG
TATGTGCGTATAAATGTCTGTGCCCATAGTTGATTAAAAAAAGGCTACTC
AGCAAGACCGCAAGAAGAAGCATGTAATGGCCAAGACAAAATAAACTGGG
AAGGCAAAAATCATCTCTATCTGTTATTTGACTTTCAAGTTTTCATATGC
TGTTCAGTGTATGAGTTGGTCGGCTCGTTACCATATCATTATCGGCAATT
TAATATGCATGCACAGACACGAATAAAGTAACACTTTCTTAATCTGCCTT
TACAAATCTTTTTCCTCCTCGTTTTCTTCTTCCTCCTTCTCCTCCTCCTT
CTCCTTCTCCTCGTCGTCGTCCTCCTCCCCTTTCTCCCCCCCCCACTTTC
TCCTCCTTCTCCCCCCCCACCTTCCTCATT back to topCoding sequence (CDS) from alignment at scaffold_18:191546..193125- >mRNA_6579 ID=mRNA_6579|Name=jgi.p|Nanoce1779_2|597390|organism=Nannochloropsis oceanica|type=CDS|length=867bp|location=Sequence derived from alignment at scaffold_18:191546..193125- (Nannochloropsis oceanica)
ATGGCCTTGGAAACGCTGCAATCTCTTAACCACGCCATTGCCCAGAGCAA
GGCCTCCTACGAACACGACGTATTAAAACTCCAACAACGTCGGGCGTTGC
GTGACGCTGGGGCAGCGGAAGTGCTCTCTCCGTTGCTGCAAGAGGGGAAG
GATACGGTGCGAAAAATGGAGGAGCAAGAGAGGGGTATGTCGGAGGATGT
TCAAAGTTGCTTAATGATGGTTGTGGAGAGCTTGGGGGAGAAAGCTATTA
TTCTAAATGAACACCATCGCTTGGCACGTCTGCAGAAGGTGGTGGCTGCG
AGGGTGAGGAACTTCCGCACCCGTGTGGCGGAAAAGGGGGCGATGGCCCT
GGAGGAGGAAAAGGCGAGGGCAGGGAAGGAGGTGGAAGTAGAGGGGGAGA
GATTAAAGGAGGAATTGGCGGGAATTGAGGAGGAGATTAAGGATCTGAAT
GAACATTTTGCACGAGAAAGGCCACGGATGGAGCAGAAGTTGAGGGTATT
GCAGGCGGCATTGGAGAGAAGGAAGGAGGGGTTGAGTAGGGAGAAGAGAC
GGTATCGCCTTGATAAAGAGGGATGGGAGAATGAAGCGAGGCTCTTGGCG
GCTTCGGTAATGAAAGCGACGAAACTGGAGGAGAAGCTAAATGTGGAAAA
GAGGGCAGCTGCTAAGGAGGCGATAAGAGAGCGGGCGGAGGTGGAGAAGG
AAGAGGAGGATGAGGAGAAGGAGATACGTGGGGCAGAGGAGAGTGAAGGG
AGGGTAGAAGGGGGCGAAGAGGACGAGGAGGAAGATGACGAAAACTTGGA
GGAATTGGCGGATTTGATGTTTCAGCTGGAGTTGCTCATGTCCAAGGAGG
GACACTTGGAGGAATAG back to top
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