Properties
Property Name | Value |
TranscriptId | 597367 |
Track | FilteredModels2 |
ProteinId | 597281 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_18 | supercontig | scaffold_18:108687..111886 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6537 ID=mRNA_6537|Name=jgi.p|Nanoce1779_2|597281|organism=Nannochloropsis oceanica|type=mRNA|length=3200bp AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA ACAACAACAACAACAACAACAACAACAACAAGAAGAAGAAAAGCAGGAGG CCAAAGGGCTCACAGTTGAGGCAGCGGATCAAGGAAACGAGAGCATCAAC AAGCTGCAGGCGCAGCTTGTGAACGAGAAGAATGGGCGTGCCGAAGCGGA GAGTGCGTTGGCGTTGGTGACTACGGATCTGACCCAAGCCCGGATAGATA CGCGGCAGGCCGAGGAGAAGGTGGACGAGAGCCGTCGAGCAATGGAGGAG GCGAAGGAGGCCGCTCGAAAGGAGCACGAGCGTGTGGATAATGAGTTGGC CATGCGTGAGGCGGAGATTGCATCATTGAAAGAGCAGTTGCTTGTGCTTT CGCGTGAAATGAAGGTGACTCAGGAGAGTCTATATCAGAATGAGACGGCT GCGCAGGGGAACGAGCTTACGGACGTATCGCTCCGCAAGAAGTTGTCGCA AGTCCAGACACAATTAGATTTGGCTCAGTCATTGGTCGACAAACATGAGG CCCGCATCAAGGAGCTTGAGACGGAGAACAATCGCGTGATTCGCGTGGCC GAGGATGATGTCAAGAAAATCCGAGCTGAGCTGGAGCAAGCAACCAGAAG CCAGGTGCAGGCTTCAGCCGAGGGGGCGGAGATGCAGCGGTTGCAGGAAG CGCACCAGGCCTTAACTAAGAAGGTGGCAACGCTCAAGGCAGAGAAGGAA GAGGCGAAAGGCCGTGCGAAGGTGGCAGTGGACGTTGCTGATGGTTTGGA GAAGGAAGTAGAGGAGTTGCGCATGCTGGTTGGTAATGGACAGAAACAAG GCAATCCTGCATCTGAAATGGAGGATCTTCGAGGAGAGCTGGAGGTTGCC CGGGCACGTGAAAACGAAGTGAGGCAGGAGGCGCACCAGCAGCAGGTGCG GCAGAAGCGTCTACAGAAAGAGGTGGAGGCTTTGCGGGAGGAATGCAGCA GGGCCCGTGACGAGCTGGAGGGAGTGAAGGCCGAGCTAGCTGCTGCGCTT GCAGCAATCGCGGTGGCTGAGAGTCAGGACAAGGGGGAGGAAGCATTGAC AACAGCGATGGCTGAGGTGGAGACGCTGCGTGCTCAGCTGGTGGTGATGA ATGAGGGGGAGGCCGCACGTGTGGCGGAACTCCAGGAGGCCTTGACCCTG ATGAAGGCGCGAGCGCAAGAAATGGAGGGGGGGCTGCAGCGGGAAGAGGC ACGGTTGAAGATTTTGGAGGGAGAGGTTGAAGAAGCTAATACGAAGGCAG AGAAGGCGGAAGGCAGCCGATCAGAGCTGCTCAAGGAATTAAATGCTTTG TTCGAGGCAAAGTTTGAGGCCGAATCACGGGTGGCGGTGTTGGAGGACGA GATGGACAAGTTGAAAAAGCAGGTGGTGGAGTGCGAGACGGGGGTGAGCC ATGGGGCGGAAGAGGCGGCGGAGGTGGAGGCGATGCGGACGGCATTGGCG CACAAGGAAGCTGAGGGATACCGTACCAAACGAGAGCTGGCTGAATTGAA GGAGGCGGCGGAGGCAGCGGAGGAGGCGATGGGGGCACAGCAGGCAGAGG TGGCTCGGTTGCAGGCCGAGAGCAGGGCGAAGGACGAGAGAATTAAGAAG CTGGATGCTGTAAAATTGACGACAGATCAGGTGGAAAAATTGAGGAAGAT CAAGGCGGAACACGCGCAATTCAGTGCGGCTAACAAGACGTTGCGGCAGG AATTAGAGGCCCTCCGGCAACAGCAGCAGGCAAAGGCGGCCGCCTCGAGC AGCAGTGCCACGCAAGCTCTAGAGGCGCAGTCACAGACGATTGCAGAGTT GATGGTCGCTCGTGATGGTCTCCGGGAGAAGTTGCAGGCAAGCATGGCCG CATGCCGTAAGCTGGAGCTGGAGCGGTTGAGCGTGAGGGAGGCTTTGCAG GAGTTGCCACCTTTTGAGGATGGAGGAAGGGAGGGGCTAGGTTTCGAGGG GGACGTACCAGAGGATTTGGGGGTGGCTGTGGGCGTGCTGTTGGAGAAAA TGCGAACGAAATTTTGTGAGAGTGATGGGGCGAGTAGGGATAGGGCAATG TTGCTCAGGGAGGTGGAGACGCTGGGAGAGGAGAAGGAAGAATTGAAGGC GAGATTGGAAGATTTAGAGGTGGGGGTGGGTGGAGCTCAGGAGGTGGAGG GGAAATTGAGGGAGAAGTATGATGGGGCATGTCTGAAGATTAAGGGCTTG GAAGAGGAGATGGAGAAGGTGATGTGTCAGATGAGGGAGGGGGCGATGGA TAGGCAAGTGGCGGCGGAGGAGGCCGCGAGGAATATTCGGTTTTTAGAAA AGGAAAATTTGGAGCTGATGATGGAGATTAAGAAGTTGCAAGAACAGGCG TGTAGGCTGCAGGCTGAGTTGGATGGTGGTGGCACCGTTGGAGGAGGAGG AGGAGGAGGAGGGGCTTTGAAGCCTATTCAAGGGCAGCATCCAAATATAA CTTCTTCGACATCATCGTCGTCGCCGTCGGTGAAAGAGATGATGGGTACG AGCAAGGTAGGCAAGTCCACATCCTCATATTCCTCCATTCCTATGTCGAG TACGACGATGCCAGCAGGCGTGGCGGGAGGAGGCAAGGAGAATGTTATGC ACGCCGCGGTGGGAAGAGTGGGAGAGAACATGCTGCGAGCAAAAGAGGAT GAGACGGCGCCGCCTTTCCGGTCAATGGATGACGATGAAACCTTGGCGGC GGCTAACCAGCAGTGCAAACAATCATAAAGTCGAGATGGGGCAAGAGAAG GAGGAAAGGTGAGGAATAATAGCCGAAAACAGGACAAGAGACAAAAAAGA CAGGGAGAAGCCAACAGCAGAGAGAAGAGGATGAGGGGAAAACAAAAGAG TTTTGAGCGAGAGGGAGTGTGGTCATGTCTTGCAGTCCATTAGAACCCTA GCTAAGAATATTTAGGGAGAGAAATACAGACAGAAGAAATCAAGGATACA TTAGTAATCAAGCAAGCGCATAAATTACAAAAATGGAAGGGAACCAAAGG AGGAAAGAAAAGATGATAACAACCGGGTACCACAGGATCATCAATAGAGG ACGTAAAATCAGAGATCGAGGTTAAAAAGAAAACGAATATTCTAGTCATA back to topprotein sequence of jgi.p|Nanoce1779_2|597281 >mRNA_6537-protein ID=mRNA_6537-protein|Name=jgi.p|Nanoce1779_2|597281|organism=Nannochloropsis oceanica|type=polypeptide|length=829bp MEEAKEAARKEHERVDNELAMREAEIASLKEQLLVLSREMKVTQESLYQN ETAAQGNELTDVSLRKKLSQVQTQLDLAQSLVDKHEARIKELETENNRVI RVAEDDVKKIRAELEQATRSQVQASAEGAEMQRLQEAHQALTKKVATLKA EKEEAKGRAKVAVDVADGLEKEVEELRMLVGNGQKQGNPASEMEDLRGEL EVARARENEVRQEAHQQQVRQKRLQKEVEALREECSRARDELEGVKAELA AALAAIAVAESQDKGEEALTTAMAEVETLRAQLVVMNEGEAARVAELQEA LTLMKARAQEMEGGLQREEARLKILEGEVEEANTKAEKAEGSRSELLKEL NALFEAKFEAESRVAVLEDEMDKLKKQVVECETGVSHGAEEAAEVEAMRT ALAHKEAEGYRTKRELAELKEAAEAAEEAMGAQQAEVARLQAESRAKDER IKKLDAVKLTTDQVEKLRKIKAEHAQFSAANKTLRQELEALRQQQQAKAA ASSSSATQALEAQSQTIAELMVARDGLREKLQASMAACRKLELERLSVRE ALQELPPFEDGGREGLGFEGDVPEDLGVAVGVLLEKMRTKFCESDGASRD RAMLLREVETLGEEKEELKARLEDLEVGVGGAQEVEGKLREKYDGACLKI KGLEEEMEKVMCQMREGAMDRQVAAEEAARNIRFLEKENLELMMEIKKLQ EQACRLQAELDGGGTVGGGGGGGGALKPIQGQHPNITSSTSSSSPSVKEM MGTSKVGKSTSSYSSIPMSSTTMPAGVAGGGKENVMHAAVGRVGENMLRA KEDETAPPFRSMDDDETLAAANQQCKQS* back to topmRNA from alignment at scaffold_18:108687..111886- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6537 ID=mRNA_6537|Name=jgi.p|Nanoce1779_2|597281|organism=Nannochloropsis oceanica|type=mRNA|length=3200bp|location=Sequence derived from alignment at scaffold_18:108687..111886- (Nannochloropsis oceanica) AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAAGAAGAAGAAAAGCAGGAGG
CCAAAGGGCTCACAGTTGAGGCAGCGGATCAAGGAAACGAGAGCATCAAC
AAGCTGCAGGCGCAGCTTGTGAACGAGAAGAATGGGCGTGCCGAAGCGGA
GAGTGCGTTGGCGTTGGTGACTACGGATCTGACCCAAGCCCGGATAGATA
CGCGGCAGGCCGAGGAGAAGGTGGACGAGAGCCGTCGAGCAATGGAGGAG
GCGAAGGAGGCCGCTCGAAAGGAGCACGAGCGTGTGGATAATGAGTTGGC
CATGCGTGAGGCGGAGATTGCATCATTGAAAGAGCAGTTGCTTGTGCTTT
CGCGTGAAATGAAGGTGACTCAGGAGAGTCTATATCAGAATGAGACGGCT
GCGCAGGGGAACGAGCTTACGGACGTATCGCTCCGCAAGAAGTTGTCGCA
AGTCCAGACACAATTAGATTTGGCTCAGTCATTGGTCGACAAACATGAGG
CCCGCATCAAGGAGCTTGAGACGGAGAACAATCGCGTGATTCGCGTGGCC
GAGGATGATGTCAAGAAAATCCGAGCTGAGCTGGAGCAAGCAACCAGAAG
CCAGGTGCAGGCTTCAGCCGAGGGGGCGGAGATGCAGCGGTTGCAGGAAG
CGCACCAGGCCTTAACTAAGAAGGTGGCAACGCTCAAGGCAGAGAAGGAA
GAGGCGAAAGGCCGTGCGAAGGTGGCAGTGGACGTTGCTGATGGTTTGGA
GAAGGAAGTAGAGGAGTTGCGCATGCTGGTTGGTAATGGACAGAAACAAG
GCAATCCTGCATCTGAAATGGAGGATCTTCGAGGAGAGCTGGAGGTTGCC
CGGGCACGTGAAAACGAAGTGAGGCAGGAGGCGCACCAGCAGCAGGTGCG
GCAGAAGCGTCTACAGAAAGAGGTGGAGGCTTTGCGGGAGGAATGCAGCA
GGGCCCGTGACGAGCTGGAGGGAGTGAAGGCCGAGCTAGCTGCTGCGCTT
GCAGCAATCGCGGTGGCTGAGAGTCAGGACAAGGGGGAGGAAGCATTGAC
AACAGCGATGGCTGAGGTGGAGACGCTGCGTGCTCAGCTGGTGGTGATGA
ATGAGGGGGAGGCCGCACGTGTGGCGGAACTCCAGGAGGCCTTGACCCTG
ATGAAGGCGCGAGCGCAAGAAATGGAGGGGGGGCTGCAGCGGGAAGAGGC
ACGGTTGAAGATTTTGGAGGGAGAGGTTGAAGAAGCTAATACGAAGGCAG
AGAAGGCGGAAGGCAGCCGATCAGAGCTGCTCAAGGAATTAAATGCTTTG
TTCGAGGCAAAGTTTGAGGCCGAATCACGGGTGGCGGTGTTGGAGGACGA
GATGGACAAGTTGAAAAAGCAGGTGGTGGAGTGCGAGACGGGGGTGAGCC
ATGGGGCGGAAGAGGCGGCGGAGGTGGAGGCGATGCGGACGGCATTGGCG
CACAAGGAAGCTGAGGGATACCGTACCAAACGAGAGCTGGCTGAATTGAA
GGAGGCGGCGGAGGCAGCGGAGGAGGCGATGGGGGCACAGCAGGCAGAGG
TGGCTCGGTTGCAGGCCGAGAGCAGGGCGAAGGACGAGAGAATTAAGAAG
CTGGATGCTGTAAAATTGACGACAGATCAGGTGGAAAAATTGAGGAAGAT
CAAGGCGGAACACGCGCAATTCAGTGCGGCTAACAAGACGTTGCGGCAGG
AATTAGAGGCCCTCCGGCAACAGCAGCAGGCAAAGGCGGCCGCCTCGAGC
AGCAGTGCCACGCAAGCTCTAGAGGCGCAGTCACAGACGATTGCAGAGTT
GATGGTCGCTCGTGATGGTCTCCGGGAGAAGTTGCAGGCAAGCATGGCCG
CATGCCGTAAGCTGGAGCTGGAGCGGTTGAGCGTGAGGGAGGCTTTGCAG
GAGTTGCCACCTTTTGAGGATGGAGGAAGGGAGGGGCTAGGTTTCGAGGG
GGACGTACCAGAGGATTTGGGGGTGGCTGTGGGCGTGCTGTTGGAGAAAA
TGCGAACGAAATTTTGTGAGAGTGATGGGGCGAGTAGGGATAGGGCAATG
TTGCTCAGGGAGGTGGAGACGCTGGGAGAGGAGAAGGAAGAATTGAAGGC
GAGATTGGAAGATTTAGAGGTGGGGGTGGGTGGAGCTCAGGAGGTGGAGG
GGAAATTGAGGGAGAAGTATGATGGGGCATGTCTGAAGATTAAGGGCTTG
GAAGAGGAGATGGAGAAGGTGATGTGTCAGATGAGGGAGGGGGCGATGGA
TAGGCAAGTGGCGGCGGAGGAGGCCGCGAGGAATATTCGGTTTTTAGAAA
AGGAAAATTTGGAGCTGATGATGGAGATTAAGAAGTTGCAAGAACAGGCG
TGTAGGCTGCAGGCTGAGTTGGATGGTGGTGGCACCGTTGGAGGAGGAGG
AGGAGGAGGAGGGGCTTTGAAGCCTATTCAAGGGCAGCATCCAAATATAA
CTTCTTCGACATCATCGTCGTCGCCGTCGGTGAAAGAGATGATGGGTACG
AGCAAGGTAGGCAAGTCCACATCCTCATATTCCTCCATTCCTATGTCGAG
TACGACGATGCCAGCAGGCGTGGCGGGAGGAGGCAAGGAGAATGTTATGC
ACGCCGCGGTGGGAAGAGTGGGAGAGAACATGCTGCGAGCAAAAGAGGAT
GAGACGGCGCCGCCTTTCCGGTCAATGGATGACGATGAAACCTTGGCGGC
GGCTAACCAGCAGTGCAAACAATCATAAAGTCGAGATGGGGCAAGAGAAG
GAGGAAAGGTGAGGAATAATAGCCGAAAACAGGACAAGAGACAAAAAAGA
CAGGGAGAAGCCAACAGCAGAGAGAAGAGGATGAGGGGAAAACAAAAGAG
TTTTGAGCGAGAGGGAGTGTGGTCATGTCTTGCAGTCCATTAGAACCCTA
GCTAAGAATATTTAGGGAGAGAAATACAGACAGAAGAAATCAAGGATACA
TTAGTAATCAAGCAAGCGCATAAATTACAAAAATGGAAGGGAACCAAAGG
AGGAAAGAAAAGATGATAACAACCGGGTACCACAGGATCATCAATAGAGG
ACGTAAAATCAGAGATCGAGGTTAAAAAGAAAACGAATATTCTAGTCATA
back to topCoding sequence (CDS) from alignment at scaffold_18:108687..111886- >mRNA_6537 ID=mRNA_6537|Name=jgi.p|Nanoce1779_2|597281|organism=Nannochloropsis oceanica|type=CDS|length=2487bp|location=Sequence derived from alignment at scaffold_18:108687..111886- (Nannochloropsis oceanica) ATGGAGGAGGCGAAGGAGGCCGCTCGAAAGGAGCACGAGCGTGTGGATAA TGAGTTGGCCATGCGTGAGGCGGAGATTGCATCATTGAAAGAGCAGTTGC TTGTGCTTTCGCGTGAAATGAAGGTGACTCAGGAGAGTCTATATCAGAAT GAGACGGCTGCGCAGGGGAACGAGCTTACGGACGTATCGCTCCGCAAGAA GTTGTCGCAAGTCCAGACACAATTAGATTTGGCTCAGTCATTGGTCGACA AACATGAGGCCCGCATCAAGGAGCTTGAGACGGAGAACAATCGCGTGATT CGCGTGGCCGAGGATGATGTCAAGAAAATCCGAGCTGAGCTGGAGCAAGC AACCAGAAGCCAGGTGCAGGCTTCAGCCGAGGGGGCGGAGATGCAGCGGT TGCAGGAAGCGCACCAGGCCTTAACTAAGAAGGTGGCAACGCTCAAGGCA GAGAAGGAAGAGGCGAAAGGCCGTGCGAAGGTGGCAGTGGACGTTGCTGA TGGTTTGGAGAAGGAAGTAGAGGAGTTGCGCATGCTGGTTGGTAATGGAC AGAAACAAGGCAATCCTGCATCTGAAATGGAGGATCTTCGAGGAGAGCTG GAGGTTGCCCGGGCACGTGAAAACGAAGTGAGGCAGGAGGCGCACCAGCA GCAGGTGCGGCAGAAGCGTCTACAGAAAGAGGTGGAGGCTTTGCGGGAGG AATGCAGCAGGGCCCGTGACGAGCTGGAGGGAGTGAAGGCCGAGCTAGCT GCTGCGCTTGCAGCAATCGCGGTGGCTGAGAGTCAGGACAAGGGGGAGGA AGCATTGACAACAGCGATGGCTGAGGTGGAGACGCTGCGTGCTCAGCTGG TGGTGATGAATGAGGGGGAGGCCGCACGTGTGGCGGAACTCCAGGAGGCC TTGACCCTGATGAAGGCGCGAGCGCAAGAAATGGAGGGGGGGCTGCAGCG GGAAGAGGCACGGTTGAAGATTTTGGAGGGAGAGGTTGAAGAAGCTAATA CGAAGGCAGAGAAGGCGGAAGGCAGCCGATCAGAGCTGCTCAAGGAATTA AATGCTTTGTTCGAGGCAAAGTTTGAGGCCGAATCACGGGTGGCGGTGTT GGAGGACGAGATGGACAAGTTGAAAAAGCAGGTGGTGGAGTGCGAGACGG GGGTGAGCCATGGGGCGGAAGAGGCGGCGGAGGTGGAGGCGATGCGGACG GCATTGGCGCACAAGGAAGCTGAGGGATACCGTACCAAACGAGAGCTGGC TGAATTGAAGGAGGCGGCGGAGGCAGCGGAGGAGGCGATGGGGGCACAGC AGGCAGAGGTGGCTCGGTTGCAGGCCGAGAGCAGGGCGAAGGACGAGAGA ATTAAGAAGCTGGATGCTGTAAAATTGACGACAGATCAGGTGGAAAAATT GAGGAAGATCAAGGCGGAACACGCGCAATTCAGTGCGGCTAACAAGACGT TGCGGCAGGAATTAGAGGCCCTCCGGCAACAGCAGCAGGCAAAGGCGGCC GCCTCGAGCAGCAGTGCCACGCAAGCTCTAGAGGCGCAGTCACAGACGAT TGCAGAGTTGATGGTCGCTCGTGATGGTCTCCGGGAGAAGTTGCAGGCAA GCATGGCCGCATGCCGTAAGCTGGAGCTGGAGCGGTTGAGCGTGAGGGAG GCTTTGCAGGAGTTGCCACCTTTTGAGGATGGAGGAAGGGAGGGGCTAGG TTTCGAGGGGGACGTACCAGAGGATTTGGGGGTGGCTGTGGGCGTGCTGT TGGAGAAAATGCGAACGAAATTTTGTGAGAGTGATGGGGCGAGTAGGGAT AGGGCAATGTTGCTCAGGGAGGTGGAGACGCTGGGAGAGGAGAAGGAAGA ATTGAAGGCGAGATTGGAAGATTTAGAGGTGGGGGTGGGTGGAGCTCAGG AGGTGGAGGGGAAATTGAGGGAGAAGTATGATGGGGCATGTCTGAAGATT AAGGGCTTGGAAGAGGAGATGGAGAAGGTGATGTGTCAGATGAGGGAGGG GGCGATGGATAGGCAAGTGGCGGCGGAGGAGGCCGCGAGGAATATTCGGT TTTTAGAAAAGGAAAATTTGGAGCTGATGATGGAGATTAAGAAGTTGCAA GAACAGGCGTGTAGGCTGCAGGCTGAGTTGGATGGTGGTGGCACCGTTGG AGGAGGAGGAGGAGGAGGAGGGGCTTTGAAGCCTATTCAAGGGCAGCATC CAAATATAACTTCTTCGACATCATCGTCGTCGCCGTCGGTGAAAGAGATG ATGGGTACGAGCAAGGTAGGCAAGTCCACATCCTCATATTCCTCCATTCC TATGTCGAGTACGACGATGCCAGCAGGCGTGGCGGGAGGAGGCAAGGAGA ATGTTATGCACGCCGCGGTGGGAAGAGTGGGAGAGAACATGCTGCGAGCA AAAGAGGATGAGACGGCGCCGCCTTTCCGGTCAATGGATGACGATGAAAC CTTGGCGGCGGCTAACCAGCAGTGCAAACAATCATAA back to top
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