Properties
| Property Name | Value |
|---|
| TranscriptId | 651576 |
| Track | FilteredModels2 |
| ProteinId | 651490 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:102727..104141 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6533 ID=mRNA_6533|Name=jgi.p|Nanoce1779_2|651490|organism=Nannochloropsis oceanica|type=mRNA|length=1415bp
ATGGAGGCAGAAAAGGAGGCCCAGCGACGGCAACAAGCCGAAAGTGAAGC
CCGTATTGCTGCGAAAGATGCTGAACGCAAACAGCGGGAGCAGAAGGAAT
GTGAGCTCCAACGAATTTGCGAGACAAGCGACGAATTGCGGGAGTTGGAA
AAAGCATTAGCCATTGCGTACATGAACAAGGAGCGTGCCGCTCAACACGA
AGAGCGACAGCTGCTAGATCACTTGGACAAGGAATGGGCCATCCGCATCG
ATGAAGATATGGAAACACGTCGCCGGCTAGCGGTTCAGACGGATCGAGGT
CGGGGAGCCGACCCACGCTTTGATCGACAGATGTTGAAGGCAGACATCCA
AAAGCAGTTGGTGGAGCAAGAACGACGCCGTCAGGAGCTGGAGAGTGCCA
CCGCGGCCCAAGACAAAGCATTGGTCCAAGCTGCAGTGAAACGCGCGCAG
CAAGAAGAAGCAGATCGGCATCGAGCATTGGCAAGGAAGAGGGAAGAGGT
CCAGCAGATGCACCGCAAGCACGAGGAGGCGCGGGAGCGCATTCAGCGCG
AGCAGCAGCAGCGGGATGCAGAGGAGGAAGTACGTATTCAACACTACCAG
GCCATGCAAATTGCTCGCAAGAGCCACATTCGGCAACGGCAGGACGAACG
CCGAGCGAGGCAGGAAGCGGTAGTTGCCAAGATTGTTGCGGAGGCGAAGC
AGAAGCAAGCGGACGAGGAGGAATTGGAGACGTTGCGGACATTGCTGCAC
GCTGAGAAAGCAGAAGCCTCACGCCTGGCAAGGGAGGAGGCGAAATGGAT
TAAAAAACAAAAAGATCGAGATGACCTCCGTCGCGCCCAGGAGGAGCAAC
TTAGGCTCAAAGCCCGGCAAGTCGCCTGGGAGCGGGTGAGGGAGGAGAAG
ATGGTGGCGGAGATGCAGGCCAAGTTCGAGGCCGAGAGTCGACGTGAGGC
AGATATCACAGCACATCGAAGGCAGGCAGACGCCACGCATCAGATGCGAT
TGCGGGAGCAGCTTGAAGACGGGCGGAGACGGGTGCAAGCGGAACACGCT
TCTGAGCATGGGCCGAGCCGGGAGGAAGCTGCGAAGGAGGCGTACAAGCA
ACAAGTGGTGACTGAAGCTCGTAGACGGCTATTGAAGGAGCATGCCTCAT
TATTAGGAGAATTTTTACCGAAAAACTTGGCCAAGGAAGTCGAGGAAGGG
AAGCGTTGTGATTGACAGAAGGGAAGCGTTGAGGGGGTGTGAAGATGAGG
AGTGGGGAAAGGGAAATGAGCGTATTGGCGGCGCGGAGAGAAAGGGATGG
AAACAGCAAGACATAACATGCATGTACAAGCGAAAGGCAAGAAAGTAGCA
TCATAATAGGAAGAAAAACAATCTCGACCTCATATCAGCCAAAGAGAACT
TCCCCAACGTGCGGC back to topprotein sequence of jgi.p|Nanoce1779_2|651490 >mRNA_6533-protein ID=mRNA_6533-protein|Name=jgi.p|Nanoce1779_2|651490|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MEAEKEAQRRQQAESEARIAAKDAERKQREQKECELQRICETSDELRELE
KALAIAYMNKERAAQHEERQLLDHLDKEWAIRIDEDMETRRRLAVQTDRG
RGADPRFDRQMLKADIQKQLVEQERRRQELESATAAQDKALVQAAVKRAQ
QEEADRHRALARKREEVQQMHRKHEEARERIQREQQQRDAEEEVRIQHYQ
AMQIARKSHIRQRQDERRARQEAVVAKIVAEAKQKQADEEELETLRTLLH
AEKAEASRLAREEAKWIKKQKDRDDLRRAQEEQLRLKARQVAWERVREEK
MVAEMQAKFEAESRREADITAHRRQADATHQMRLREQLEDGRRRVQAEHA
SEHGPSREEAAKEAYKQQVVTEARRRLLKEHASLLGEFLPKNLAKEVEEG
KRCD* back to topmRNA from alignment at scaffold_18:102727..104141- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6533 ID=mRNA_6533|Name=jgi.p|Nanoce1779_2|651490|organism=Nannochloropsis oceanica|type=mRNA|length=1415bp|location=Sequence derived from alignment at scaffold_18:102727..104141- (Nannochloropsis oceanica)
ATGGAGGCAGAAAAGGAGGCCCAGCGACGGCAACAAGCCGAAAGTGAAGC
CCGTATTGCTGCGAAAGATGCTGAACGCAAACAGCGGGAGCAGAAGGAAT
GTGAGCTCCAACGAATTTGCGAGACAAGCGACGAATTGCGGGAGTTGGAA
AAAGCATTAGCCATTGCGTACATGAACAAGGAGCGTGCCGCTCAACACGA
AGAGCGACAGCTGCTAGATCACTTGGACAAGGAATGGGCCATCCGCATCG
ATGAAGATATGGAAACACGTCGCCGGCTAGCGGTTCAGACGGATCGAGGT
CGGGGAGCCGACCCACGCTTTGATCGACAGATGTTGAAGGCAGACATCCA
AAAGCAGTTGGTGGAGCAAGAACGACGCCGTCAGGAGCTGGAGAGTGCCA
CCGCGGCCCAAGACAAAGCATTGGTCCAAGCTGCAGTGAAACGCGCGCAG
CAAGAAGAAGCAGATCGGCATCGAGCATTGGCAAGGAAGAGGGAAGAGGT
CCAGCAGATGCACCGCAAGCACGAGGAGGCGCGGGAGCGCATTCAGCGCG
AGCAGCAGCAGCGGGATGCAGAGGAGGAAGTACGTATTCAACACTACCAG
GCCATGCAAATTGCTCGCAAGAGCCACATTCGGCAACGGCAGGACGAACG
CCGAGCGAGGCAGGAAGCGGTAGTTGCCAAGATTGTTGCGGAGGCGAAGC
AGAAGCAAGCGGACGAGGAGGAATTGGAGACGTTGCGGACATTGCTGCAC
GCTGAGAAAGCAGAAGCCTCACGCCTGGCAAGGGAGGAGGCGAAATGGAT
TAAAAAACAAAAAGATCGAGATGACCTCCGTCGCGCCCAGGAGGAGCAAC
TTAGGCTCAAAGCCCGGCAAGTCGCCTGGGAGCGGGTGAGGGAGGAGAAG
ATGGTGGCGGAGATGCAGGCCAAGTTCGAGGCCGAGAGTCGACGTGAGGC
AGATATCACAGCACATCGAAGGCAGGCAGACGCCACGCATCAGATGCGAT
TGCGGGAGCAGCTTGAAGACGGGCGGAGACGGGTGCAAGCGGAACACGCT
TCTGAGCATGGGCCGAGCCGGGAGGAAGCTGCGAAGGAGGCGTACAAGCA
ACAAGTGGTGACTGAAGCTCGTAGACGGCTATTGAAGGAGCATGCCTCAT
TATTAGGAGAATTTTTACCGAAAAACTTGGCCAAGGAAGTCGAGGAAGGG
AAGCGTTGTGATTGACAGAAGGGAAGCGTTGAGGGGGTGTGAAGATGAGG
AGTGGGGAAAGGGAAATGAGCGTATTGGCGGCGCGGAGAGAAAGGGATGG
AAACAGCAAGACATAACATGCATGTACAAGCGAAAGGCAAGAAAGTAGCA
TCATAATAGGAAGAAAAACAATCTCGACCTCATATCAGCCAAAGAGAACT
TCCCCAACGTGCGGC back to topCoding sequence (CDS) from alignment at scaffold_18:102727..104141- >mRNA_6533 ID=mRNA_6533|Name=jgi.p|Nanoce1779_2|651490|organism=Nannochloropsis oceanica|type=CDS|length=1215bp|location=Sequence derived from alignment at scaffold_18:102727..104141- (Nannochloropsis oceanica)
ATGGAGGCAGAAAAGGAGGCCCAGCGACGGCAACAAGCCGAAAGTGAAGC
CCGTATTGCTGCGAAAGATGCTGAACGCAAACAGCGGGAGCAGAAGGAAT
GTGAGCTCCAACGAATTTGCGAGACAAGCGACGAATTGCGGGAGTTGGAA
AAAGCATTAGCCATTGCGTACATGAACAAGGAGCGTGCCGCTCAACACGA
AGAGCGACAGCTGCTAGATCACTTGGACAAGGAATGGGCCATCCGCATCG
ATGAAGATATGGAAACACGTCGCCGGCTAGCGGTTCAGACGGATCGAGGT
CGGGGAGCCGACCCACGCTTTGATCGACAGATGTTGAAGGCAGACATCCA
AAAGCAGTTGGTGGAGCAAGAACGACGCCGTCAGGAGCTGGAGAGTGCCA
CCGCGGCCCAAGACAAAGCATTGGTCCAAGCTGCAGTGAAACGCGCGCAG
CAAGAAGAAGCAGATCGGCATCGAGCATTGGCAAGGAAGAGGGAAGAGGT
CCAGCAGATGCACCGCAAGCACGAGGAGGCGCGGGAGCGCATTCAGCGCG
AGCAGCAGCAGCGGGATGCAGAGGAGGAAGTACGTATTCAACACTACCAG
GCCATGCAAATTGCTCGCAAGAGCCACATTCGGCAACGGCAGGACGAACG
CCGAGCGAGGCAGGAAGCGGTAGTTGCCAAGATTGTTGCGGAGGCGAAGC
AGAAGCAAGCGGACGAGGAGGAATTGGAGACGTTGCGGACATTGCTGCAC
GCTGAGAAAGCAGAAGCCTCACGCCTGGCAAGGGAGGAGGCGAAATGGAT
TAAAAAACAAAAAGATCGAGATGACCTCCGTCGCGCCCAGGAGGAGCAAC
TTAGGCTCAAAGCCCGGCAAGTCGCCTGGGAGCGGGTGAGGGAGGAGAAG
ATGGTGGCGGAGATGCAGGCCAAGTTCGAGGCCGAGAGTCGACGTGAGGC
AGATATCACAGCACATCGAAGGCAGGCAGACGCCACGCATCAGATGCGAT
TGCGGGAGCAGCTTGAAGACGGGCGGAGACGGGTGCAAGCGGAACACGCT
TCTGAGCATGGGCCGAGCCGGGAGGAAGCTGCGAAGGAGGCGTACAAGCA
ACAAGTGGTGACTGAAGCTCGTAGACGGCTATTGAAGGAGCATGCCTCAT
TATTAGGAGAATTTTTACCGAAAAACTTGGCCAAGGAAGTCGAGGAAGGG
AAGCGTTGTGATTGA back to top
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