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Properties
| Property Name | Value |
|---|
| TranscriptId | 672494 |
| Track | FilteredModels2 |
| ProteinId | 672408 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:24876..25965 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6495 ID=mRNA_6495|Name=jgi.p|Nanoce1779_2|672408|organism=Nannochloropsis oceanica|type=mRNA|length=913bp
GTGATATTTCTTGGTCGCCACGCAAGCAAGGGGGCACCATGCACGTCAAC
CGTTCTCAATATCATCGGCATAGTCGCTCAAACTGCTGCGTTCGCTGCCT
GCTTTTCCACCGCCCCCTCTTACCTAGGCAATTACGCCACACAAATCTCA
GAGCAAGGGAAGCCGTGAGCTAAATGTTCCAGCAGTCTAGCGCCGCCTTG
TCGTCGACCCAAGCATGATTTATCACCCCTTTCGCATCGGCATCCTCTAC
GTCTATCCCATCATTGCCTCGTGCCGCACTGCCCTTCGATACCATCCGTA
TTTGCAGAAGGAGCGGCTGCAACAGCCCAACATCCCTGAGTCTACCTCTA
GCAATTCTACCCCCCATCGAAATCAAATCGACAATAACGACAGCCACCTG
CACGACGTTGAGCATTGGTGCCTCTACTGGCTTGTCTCCTCCATCCTCAC
CCTCCTCCTTGAGCGTCCCGTCGACGCCCTGGTGTTGTCTTGGGTGCCCT
CCTATCGGTGGATCAAACTCATCTTCTTCCTCTGGTTGGCCCTCCCTCGT
TTCCAAGGAGCGGCGCGACTTTACTATTTGATAGTCCACCCCTGGTTGAT
ACAACATGAGACTGAAATCGATGCGGCACGGGGTAAAGCATGGGAGGCAG
CGAAGGTGGGAGGAAGGAAACTGGCGGTGGCAGCAGTTTCAGTGGCGACA
GCAGCTGTGGCGGGGCCGGGGGAGGGGGAGGGGGAGAGAGGACAAGGACA
AAGGCAAGGAAGTGCAGGTGGAGGGAGAGTAGGAGGAGGGTTGGCAGTGT
TGGGAGGTTCCGAGCTGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGAGGGAAGAGGAGAGGGAGGAAAAGGGGGAGGGGGAGAA
AGAGGATCAGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|672408 >mRNA_6495-protein ID=mRNA_6495-protein|Name=jgi.p|Nanoce1779_2|672408|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MIYHPFRIGILYVYPIIASCRTALRYHPYLQKERLQQPNIPESTSSNSTP
HRNQIDNNDSHLHDVEHWCLYWLVSSILTLLLERPVDALVLSWVPSYRWI
KLIFFLWLALPRFQGAARLYYLIVHPWLIQHETEIDAARGKAWEAAKVGG
RKLAVAAVSVATAAVAGPGEGEGERGQGQRQGSAGGGRVGGGLAVLGGSE
LEEKEEEEEEEEEEEEREEEREEKGEGEKEDQ* back to topmRNA from alignment at scaffold_18:24876..25965- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6495 ID=mRNA_6495|Name=jgi.p|Nanoce1779_2|672408|organism=Nannochloropsis oceanica|type=mRNA|length=1090bp|location=Sequence derived from alignment at scaffold_18:24876..25965- (Nannochloropsis oceanica)
GTGATATTTCTTGGTCGCCACGCAAGCAAGGGGGCACCATGCACGTCAAC
CGTTCTCAATATCATCGGCATAGTCGCTCAAACTGCTGCGTTCGCTGCCT
GCTTTTCCACCGCCCCCTCTTACCTAGGCAATTACGCCACACAAATCTCA
GAGCAAGGGAAGCCGTGAGCTAAATGTTCCAGCAGTCTAGCGCCGCCTTG
TCGTCGACCCAAGCATGATTTATCACCCCTTTCGGTACGTCCTTTTTTGT
CTCCGTCTGTTTCCTTTCCCTCTCCCTCCCCATGATGGGGACCCAATCGA
TACTCCCTTAAGCACCCACCACCACTCGATCCCCATCACAGCATCGGCAT
CCTCTACGTCTATCCCATCATTGCCTCGTGCCGCACTGCCCTTCGATACC
ATCCGTATTTGCAGAAGGAGCGGCTGCAACAGCCCAACATCCCTGAGTCT
ACCTCTAGCAATTCTACCCCCCATCGAAATCAAATCGACAATAACGACAG
CCACCTGCACGACGTTGAGCATTGGTGCCTCTACTGGCTTGTCTCCTCCA
TCCTCACCCTCCTCCTTGAGCGTCCCGTCGACGCCCTGGTGTTGTCTTGG
GTGCCCTCCTATCGGTGGATCAAACTCATCTTCTTCCTCTGGTTGGCCCT
CCCTCGTTTCCAAGGAGCGGCGCGACTTTACTATTTGATAGTCCACCCCT
GGTTGATACAACATGAGACTGAAATCGATGCGGCACGGGGTAAAGCATGG
GAGGCAGCGAAGGTGGGAGGAAGGAAACTGGCGGTGGCAGCAGTTTCAGT
GGCGACAGCAGCTGTGGCGGGGCCGGGGGAGGGGGAGGGGGAGAGAGGAC
AAGGACAAAGGCAAGGAAGTGCAGGTGGAGGGAGAGTAGGAGGAGGGTTG
GCAGTGTTGGGAGGTGTGAGCGGGTTTGGGGGGTTACGTGCGCTAGTTTC
GGAGGCTTTGTGGGTGGTGCTTGCTTCTCTGACAGTCCGAGCTGGAGGAG
AAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAAGAGGA
GAGGGAGGAAAAGGGGGAGGGGGAGAAAGAGGATCAGTGA back to topCoding sequence (CDS) from alignment at scaffold_18:24876..25965- >mRNA_6495 ID=mRNA_6495|Name=jgi.p|Nanoce1779_2|672408|organism=Nannochloropsis oceanica|type=CDS|length=2097bp|location=Sequence derived from alignment at scaffold_18:24876..25965- (Nannochloropsis oceanica)
TCCGAGCTGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGAGGGAAGAGGAGAGGGAGGAAAAGGGGGAGGGGGAGAAAGAGGATC
AGTGACATCGGCATCCTCTACGTCTATCCCATCATTGCCTCGTGCCGCAC
TGCCCTTCGATACCATCCGTATTTGCAGAAGGAGCGGCTGCAACAGCCCA
ACATCCCTGAGTCTACCTCTAGCAATTCTACCCCCCATCGAAATCAAATC
GACAATAACGACAGCCACCTGCACGACGTTGAGCATTGGTGCCTCTACTG
GCTTGTCTCCTCCATCCTCACCCTCCTCCTTGAGCGTCCCGTCGACGCCC
TGGTGTTGTCTTGGGTGCCCTCCTATCGGTGGATCAAACTCATCTTCTTC
CTCTGGTTGGCCCTCCCTCGTTTCCAAGGAGCGGCGCGACTTTACTATTT
GATAGTCCACCCCTGGTTGATACAACATGAGACTGAAATCGATGCGGCAC
GGGGTAAAGCATGGGAGGCAGCGAAGGTGGGAGGAAGGAAACTGGCGGTG
GCAGCAGTTTCAGTGGCGACAGCAGCTGTGGCGGGGCCGGGGGAGGGGGA
GGGGGAGAGAGGACAAGGACAAAGGCAAGGAAGTGCAGGTGGAGGGAGAG
TAGGAGGAGGGTTGGCAGTGTTGGGAGGTATGATTTATCACCCCTTTCGT
CCGAGCTGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGAGGGAAGAGGAGAGGGAGGAAAAGGGGGAGGGGGAGAAAGAGGATCA
GTGACATCGGCATCCTCTACGTCTATCCCATCATTGCCTCGTGCCGCACT
GCCCTTCGATACCATCCGTATTTGCAGAAGGAGCGGCTGCAACAGCCCAA
CATCCCTGAGTCTACCTCTAGCAATTCTACCCCCCATCGAAATCAAATCG
ACAATAACGACAGCCACCTGCACGACGTTGAGCATTGGTGCCTCTACTGG
CTTGTCTCCTCCATCCTCACCCTCCTCCTTGAGCGTCCCGTCGACGCCCT
GGTGTTGTCTTGGGTGCCCTCCTATCGGTGGATCAAACTCATCTTCTTCC
TCTGGTTGGCCCTCCCTCGTTTCCAAGGAGCGGCGCGACTTTACTATTTG
ATAGTCCACCCCTGGTTGATACAACATGAGACTGAAATCGATGCGGCACG
GGGTAAAGCATGGGAGGCAGCGAAGGTGGGAGGAAGGAAACTGGCGGTGG
CAGCAGTTTCAGTGGCGACAGCAGCTGTGGCGGGGCCGGGGGAGGGGGAG
GGGGAGAGAGGACAAGGACAAAGGCAAGGAAGTGCAGGTGGAGGGAGAGT
AGGAGGAGGGTTGGCAGTGTTGGGAGGTATGATTTATCACCCCTTTCGTC
CGAGCTGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGAGGGAAGAGGAGAGGGAGGAAAAGGGGGAGGGGGAGAAAGAGGATCAG
TGACATCGGCATCCTCTACGTCTATCCCATCATTGCCTCGTGCCGCACTG
CCCTTCGATACCATCCGTATTTGCAGAAGGAGCGGCTGCAACAGCCCAAC
ATCCCTGAGTCTACCTCTAGCAATTCTACCCCCCATCGAAATCAAATCGA
CAATAACGACAGCCACCTGCACGACGTTGAGCATTGGTGCCTCTACTGGC
TTGTCTCCTCCATCCTCACCCTCCTCCTTGAGCGTCCCGTCGACGCCCTG
GTGTTGTCTTGGGTGCCCTCCTATCGGTGGATCAAACTCATCTTCTTCCT
CTGGTTGGCCCTCCCTCGTTTCCAAGGAGCGGCGCGACTTTACTATTTGA
TAGTCCACCCCTGGTTGATACAACATGAGACTGAAATCGATGCGGCACGG
GGTAAAGCATGGGAGGCAGCGAAGGTGGGAGGAAGGAAACTGGCGGTGGC
AGCAGTTTCAGTGGCGACAGCAGCTGTGGCGGGGCCGGGGGAGGGGGAGG
GGGAGAGAGGACAAGGACAAAGGCAAGGAAGTGCAGGTGGAGGGAGAGTA
GGAGGAGGGTTGGCAGTGTTGGGAGGTATGATTTATCACCCCTTTCG back to top
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