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Properties
| Property Name | Value |
|---|
| TranscriptId | 95230 |
| Track | FilteredModels2 |
| ProteinId | 95144 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:685125..686476 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6454 ID=mRNA_6454|Name=jgi.p|Nanoce1779_2|95144|organism=Nannochloropsis oceanica|type=mRNA|length=1166bp
AGTCGAGTTATGGGGGGGGGGAGAGAGAGAAGGAGAAGGAGAATGAGATG
GACAAATTATGGGAACGAGTGAGAGAAGCCGTTCAGGCTAGGCTCTGGGT
GAAGCACACTTGCATCATCCTCAAGGCCACGTGTCCGCTCGCCCTCCTTC
TCGCCTTCAAGTTACCAATCCCTCATTCCTGCATAAACCAAAGAACAAGC
CCCTTTATTCCAAAGTGCTTATGAATGATTTCCTTTTTTTCCTTCTTTCA
AACAGGCAAGGCCATGGGCCTGACGGAGCTAGTGGCCGCTGGTGACACCC
GCTCTAGAATCAAGACACTAGAACGCAGCGGCCTCTCCATTGCTGTCTAC
GGCGGAACCATTCTGATCGATGAGGCCCGCGTCACCGAGTGGGGCAACGA
AGCCAGCAACGGCGTCATTCACGTTCTGGATAGCCTCCTCCTTCCCTGCC
TCCCTGCGGATTTCAATCCCTACGAGTCTGCCGAAGCCGCGGCTGAGGGT
CCAGTGTTGGGCGTTACGCCCCCCCTCGGTCTCTGGGACCCGTTGGGGTT
ATGGAAGGACGAAGACAAAGACACGCAAACCCGGTTCCGAAAAGCTGAGA
TAAAGCATGCGCGCTTGGCTATGCTGGCATCAGTGGGCGTGTTAGGGCAA
GAGGCGTTGTTGTCTGGTCATCCCCCCGCACTGAGCGCTCTCTTGAAAAT
GGGTGAAGAACATTCTGCTGCTACCGCTGCTATGACCTCAGCGACGAGCT
CATTGTCGCCTCTTTTACCGATAGCTGTTGCGTTTCTTCCCGGGGTTATC
TATGAAGTGTACTTCAATCTTGTTAAGGCTGGGAGGGAGGAGAGGTCGGT
ATTGGGGCAGAAAGAGGAAGCCCTCACGCGAATCCTTCGGCAAGAATCGC
CCGACTTCGAGGAGGAGCGGGAGACAAAGCGTCAAGAGGTAGCATTGGGA
AACAAAGAGTTAAATAATGGGCGGTTGGCTATGATGGCGGTGGTGGGGAT
GCTAGCCCAGGAGCTGGTGACGGGAAGGGGAATCTGGGACTGGGGGAGCT
AGAAGGGCGAGTCCGGCAGGTAGAAATATGTTTTTGATAAAAGTGGAGCC
TGTATGATTGTGGAGCAGATGAAACAAATGATAGCCTTTAGTTTTAGGAA
TGTTGTGATAGTACTT back to topprotein sequence of jgi.p|Nanoce1779_2|95144 >mRNA_6454-protein ID=mRNA_6454-protein|Name=jgi.p|Nanoce1779_2|95144|organism=Nannochloropsis oceanica|type=polypeptide|length=276bp
MISFFSFFQTGKAMGLTELVAAGDTRSRIKTLERSGLSIAVYGGTILIDE
ARVTEWGNEASNGVIHVLDSLLLPCLPADFNPYESAEAAAEGPVLGVTPP
LGLWDPLGLWKDEDKDTQTRFRKAEIKHARLAMLASVGVLGQEALLSGHP
PALSALLKMGEEHSAATAAMTSATSSLSPLLPIAVAFLPGVIYEVYFNLV
KAGREERSVLGQKEEALTRILRQESPDFEEERETKRQEVALGNKELNNGR
LAMMAVVGMLAQELVTGRGIWDWGS* back to topmRNA from alignment at scaffold_15:685125..686476+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6454 ID=mRNA_6454|Name=jgi.p|Nanoce1779_2|95144|organism=Nannochloropsis oceanica|type=mRNA|length=1352bp|location=Sequence derived from alignment at scaffold_15:685125..686476+ (Nannochloropsis oceanica)
AGTCGAGTTATGGGGGGGGGGAGAGAGAGAAGGAGAAGGAGAATGAGATG
GACAAATTATGGGAACGAGTGAGAGAAGCCGTTCAGGCTAGGCTCTGGGT
GAAGCACACTTGCATCATCCTCAAGGCCACGTGTCCGCTCGCCCTCCTTC
TCGCCTTCAAGTTACCAATCCCTCATTCCTGCATAAACCAAAGAACAAGC
CCCTTTATTCCAAAGTGCTTATGAATGATTTCCTTTTTTTCCTTCTTTCA
AACAGGCAAGGCCATGGGCCTGACGGAGCTAGTGGCCGCTGGTGACACCC
GCTCTAGAATCAAGGTGGGTTCAGGGAATGAGGGAGGGAGGGAGGGAGGG
ATGAAGGAAGGGAGAAGAGAAAAATGTAAATAGCGGCAGAATAGATGGAA
ATGATAAGGCACACAATCGCACCCTCAATAACCTCCTTAATCCTTTTCTT
TTTCGCCCCCTTCCATCCCCTCCCAAATCATCACCAAACGGTTGAATCAG
ACACTAGAACGCAGCGGCCTCTCCATTGCTGTCTACGGCGGAACCATTCT
GATCGATGAGGCCCGCGTCACCGAGTGGGGCAACGAAGCCAGCAACGGCG
TCATTCACGTTCTGGATAGCCTCCTCCTTCCCTGCCTCCCTGCGGATTTC
AATCCCTACGAGTCTGCCGAAGCCGCGGCTGAGGGTCCAGTGTTGGGCGT
TACGCCCCCCCTCGGTCTCTGGGACCCGTTGGGGTTATGGAAGGACGAAG
ACAAAGACACGCAAACCCGGTTCCGAAAAGCTGAGATAAAGCATGCGCGC
TTGGCTATGCTGGCATCAGTGGGCGTGTTAGGGCAAGAGGCGTTGTTGTC
TGGTCATCCCCCCGCACTGAGCGCTCTCTTGAAAATGGGTGAAGAACATT
CTGCTGCTACCGCTGCTATGACCTCAGCGACGAGCTCATTGTCGCCTCTT
TTACCGATAGCTGTTGCGTTTCTTCCCGGGGTTATCTATGAAGTGTACTT
CAATCTTGTTAAGGCTGGGAGGGAGGAGAGGTCGGTATTGGGGCAGAAAG
AGGAAGCCCTCACGCGAATCCTTCGGCAAGAATCGCCCGACTTCGAGGAG
GAGCGGGAGACAAAGCGTCAAGAGGTAGCATTGGGAAACAAAGAGTTAAA
TAATGGGCGGTTGGCTATGATGGCGGTGGTGGGGATGCTAGCCCAGGAGC
TGGTGACGGGAAGGGGAATCTGGGACTGGGGGAGCTAGAAGGGCGAGTCC
GGCAGGTAGAAATATGTTTTTGATAAAAGTGGAGCCTGTATGATTGTGGA
GCAGATGAAACAAATGATAGCCTTTAGTTTTAGGAATGTTGTGATAGTAC
TT back to topCoding sequence (CDS) from alignment at scaffold_15:685125..686476+ >mRNA_6454 ID=mRNA_6454|Name=jgi.p|Nanoce1779_2|95144|organism=Nannochloropsis oceanica|type=CDS|length=1656bp|location=Sequence derived from alignment at scaffold_15:685125..686476+ (Nannochloropsis oceanica)
ATGATTTCCTTTTTTTCCTTCTTTCAAACAGGCAAGGCCATGGGCCTGAC
GGAGCTAGTGGCCGCTGGTGACACCCGCTCTAGAATCAAGACACTAGAAC
GCAGCGGCCTCTCCATTGCTGTCTACGGCGGAACCATTCTGATCGATGAG
GCCCGCGTCACCGAGTGGGGCAACGAAGCCAGCAACGGCGTCATTCACGT
TCTGGATAGCCTCCTCCTTCCCTGCCTCCCTGCGGATTTCAATCCCTACG
AGTCTGCCGAAGCCGCGGCTGAGGGTCCAGTGTTGGGCGTTACGCCCCCC
CTCGGTCTCTGGGACCCGTTGGGGTTATGGAAGGACGAAGACAAAGACAC
GCAAACCCGGTTCCGAAAAGCTGAGATAAAGCATGCGCGCTTGGCTATGC
TGGCATCAGTGGGCGTGTTAGGGCAAGAGGCGTTGTTGTCTGGTCATCCC
CCCGCACTGAGCGCTCTCTTGAAAATGGGTGAAGAACATTCTGCTGCTAC
CGCTGCTATGACCTCAGCGACGAGCTCATTGTCGCCTCTTTTACCGATAG
CTGTTGCGTTTCTTCCCGGGGTTATCTATGAAGTGTACTTCAATCTTGTT
AAGGCTGGGAGGGAGGAGAGGTCGGTATTGGGGCAGAAAGAGGAAGCCCT
CACGCGAATCCTTCGGCAAGAATCGCCCGACTTCGAGGAGGAGCGGGAGA
CAAAGCGTCAAGAGGTAGCATTGGGAAACAAAGAGTTAAATAATGGGCGG
TTGGCTATGATGGCGGTGGTGGGGATGCTAGCCCAGGAGCTGGTGACGGG
AAGGGGAATCTGGGACTGGGGGAGCTAGATGATTTCCTTTTTTTCCTTCT
TTCAAACAGGCAAGGCCATGGGCCTGACGGAGCTAGTGGCCGCTGGTGAC
ACCCGCTCTAGAATCAAGACACTAGAACGCAGCGGCCTCTCCATTGCTGT
CTACGGCGGAACCATTCTGATCGATGAGGCCCGCGTCACCGAGTGGGGCA
ACGAAGCCAGCAACGGCGTCATTCACGTTCTGGATAGCCTCCTCCTTCCC
TGCCTCCCTGCGGATTTCAATCCCTACGAGTCTGCCGAAGCCGCGGCTGA
GGGTCCAGTGTTGGGCGTTACGCCCCCCCTCGGTCTCTGGGACCCGTTGG
GGTTATGGAAGGACGAAGACAAAGACACGCAAACCCGGTTCCGAAAAGCT
GAGATAAAGCATGCGCGCTTGGCTATGCTGGCATCAGTGGGCGTGTTAGG
GCAAGAGGCGTTGTTGTCTGGTCATCCCCCCGCACTGAGCGCTCTCTTGA
AAATGGGTGAAGAACATTCTGCTGCTACCGCTGCTATGACCTCAGCGACG
AGCTCATTGTCGCCTCTTTTACCGATAGCTGTTGCGTTTCTTCCCGGGGT
TATCTATGAAGTGTACTTCAATCTTGTTAAGGCTGGGAGGGAGGAGAGGT
CGGTATTGGGGCAGAAAGAGGAAGCCCTCACGCGAATCCTTCGGCAAGAA
TCGCCCGACTTCGAGGAGGAGCGGGAGACAAAGCGTCAAGAGGTAGCATT
GGGAAACAAAGAGTTAAATAATGGGCGGTTGGCTATGATGGCGGTGGTGG
GGATGCTAGCCCAGGAGCTGGTGACGGGAAGGGGAATCTGGGACTGGGGG
AGCTAG back to top
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