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Properties
| Property Name | Value |
|---|
| TranscriptId | 631626 |
| Track | FilteredModels2 |
| ProteinId | 631540 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:579530..580623 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6414 ID=mRNA_6414|Name=jgi.p|Nanoce1779_2|631540|organism=Nannochloropsis oceanica|type=mRNA|length=975bp
AACAGCTAAAGGCCAGCGGCACAGATGTCCCGCCGGCCGGCGGTGCATCT
GCTTCGGCTGAGCAAGGCGGTTAATATCAAGGACCAACTACGGCTGGAAG
AAGCATTGCTGCGGCACGACACGCGGAATTGGTGCTTACTCAAGGATGGA
GAGCCAGCAGGTGTCATGGCACGACCTACGATCGTCTTAGGCATTGGCGG
GAAGGCATCTAAGTTGGTAGAGTTGGAGCGCGTCAACCAGGACCGGGTGC
CCTTGCTACGACGGTTTTCCGGGGGCGGTACAGTAATTGTCGATCACGAC
TCGCTCTTCATCACTTTCATCATGAACACAGAGCAAGTCACCCCCAAGCA
GCCCTACCCGCGGCCCATCATGGAGTGGACGGCAGGCGTGTACGGCCCCG
TCTTTGACCGCCTACGGACAACGCAGACAGAGCCTTTTCAGCTCCGGGAG
AATGACTACGTGTTTGGGCCTTTGAAGTTCGGAGGCAATGCGCAAAGCAT
CGTCAAAGACCGGTGGCTGCACCACACGTCCTTCCTTTGGGATTTCCAGC
ACCCAAACATGGACTACTTAGCACTTCCCGAGCGACGCCCCGAGTACCGG
CAGAACCGCTGCCACGGAGCCTTCTTGACGCGGTTGAAGGAGCACACGTT
GCAACAAGACCGGGCGGCGCTCTTCCGGGAGTTGGAGGTGGAGCTTGGCG
TGCATTTCGACGTGCACATCGCTGACGAGGCCGAGGTGCGGGCTGAAGTG
ATTGATGACAAGCTGGGTGGTATGGTGATGTGGGCGGAAAAAGCAAGGAC
TCGCGATGTCTCGCCCGTTGAGGAATTGGCCAAGCATCGAGAGCAGCTGC
AAGCAATGCACTCGCAGCAGCACCCCCTGAAAAATACTGAAATGGGAAAA
CAAAATAAGTAGCAAACTGTGTACCAACTGTGATGAAATAAAGGAATAAA
CGAATTGCAATGCAAGGAGGTTAAC back to topprotein sequence of jgi.p|Nanoce1779_2|631540 >mRNA_6414-protein ID=mRNA_6414-protein|Name=jgi.p|Nanoce1779_2|631540|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp
MSRRPAVHLLRLSKAVNIKDQLRLEEALLRHDTRNWCLLKDGEPAGVMAR
PTIVLGIGGKASKLVELERVNQDRVPLLRRFSGGGTVIVDHDSLFITFIM
NTEQVTPKQPYPRPIMEWTAGVYGPVFDRLRTTQTEPFQLRENDYVFGPL
KFGGNAQSIVKDRWLHHTSFLWDFQHPNMDYLALPERRPEYRQNRCHGAF
LTRLKEHTLQQDRAALFRELEVELGVHFDVHIADEAEVRAEVIDDKLGGM
VMWAEKARTRDVSPVEELAKHREQLQAMHSQQHPLKNTEMGKQNK* back to topmRNA from alignment at scaffold_15:579530..580623- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6414 ID=mRNA_6414|Name=jgi.p|Nanoce1779_2|631540|organism=Nannochloropsis oceanica|type=mRNA|length=1094bp|location=Sequence derived from alignment at scaffold_15:579530..580623- (Nannochloropsis oceanica)
AACAGCTAAAGGCCAGCGGCACAGATGTCCCGCCGGCCGGCGGTGCATCT
GCTTCGGCTGAGCAAGGCGGTTAATATCAAGGACCAACTACGGCTGGAAG
AAGCATTGCTGCGGCACGACACGCGGAATTGGTGCTTACTCAAGGATGGA
GAGCCAGCAGGTGTCATGGCACGACCTACGATCGTCTTAGGCATTGGCGG
GAAGGCATCTAAGTTGGTAGAGTTGGAGCGCGTCAACCAGGACCGGGTGC
CCTTGCTACGACGGTTTTCCGGGGGCGGTACAGTAATTGTCGATCACGAC
TCGCTCTTCATCACTTTCATCATGAACACAGTAAGTAAGGGAGACATAGA
GGCAAGGATAAATGTAAATCAGGGGAAGCGCATAAAATAAGCGAGTTTAT
GTGAAACATCACACCATTTACAACACGACCACCTTTCCGAACAACAAAGG
AGCAAGTCACCCCCAAGCAGCCCTACCCGCGGCCCATCATGGAGTGGACG
GCAGGCGTGTACGGCCCCGTCTTTGACCGCCTACGGACAACGCAGACAGA
GCCTTTTCAGCTCCGGGAGAATGACTACGTGTTTGGGCCTTTGAAGTTCG
GAGGCAATGCGCAAAGCATCGTCAAAGACCGGTGGCTGCACCACACGTCC
TTCCTTTGGGATTTCCAGCACCCAAACATGGACTACTTAGCACTTCCCGA
GCGACGCCCCGAGTACCGGCAGAACCGCTGCCACGGAGCCTTCTTGACGC
GGTTGAAGGAGCACACGTTGCAACAAGACCGGGCGGCGCTCTTCCGGGAG
TTGGAGGTGGAGCTTGGCGTGCATTTCGACGTGCACATCGCTGACGAGGC
CGAGGTGCGGGCTGAAGTGATTGATGACAAGCTGGGTGGTATGGTGATGT
GGGCGGAAAAAGCAAGGACTCGCGATGTCTCGCCCGTTGAGGAATTGGCC
AAGCATCGAGAGCAGCTGCAAGCAATGCACTCGCAGCAGCACCCCCTGAA
AAATACTGAAATGGGAAAACAAAATAAGTAGCAAACTGTGTACCAACTGT
GATGAAATAAAGGAATAAACGAATTGCAATGCAAGGAGGTTAAC back to topCoding sequence (CDS) from alignment at scaffold_15:579530..580623- >mRNA_6414 ID=mRNA_6414|Name=jgi.p|Nanoce1779_2|631540|organism=Nannochloropsis oceanica|type=CDS|length=1776bp|location=Sequence derived from alignment at scaffold_15:579530..580623- (Nannochloropsis oceanica)
GAGCAAGTCACCCCCAAGCAGCCCTACCCGCGGCCCATCATGGAGTGGAC
GGCAGGCGTGTACGGCCCCGTCTTTGACCGCCTACGGACAACGCAGACAG
AGCCTTTTCAGCTCCGGGAGAATGACTACGTGTTTGGGCCTTTGAAGTTC
GGAGGCAATGCGCAAAGCATCGTCAAAGACCGGTGGCTGCACCACACGTC
CTTCCTTTGGGATTTCCAGCACCCAAACATGGACTACTTAGCACTTCCCG
AGCGACGCCCCGAGTACCGGCAGAACCGCTGCCACGGAGCCTTCTTGACG
CGGTTGAAGGAGCACACGTTGCAACAAGACCGGGCGGCGCTCTTCCGGGA
GTTGGAGGTGGAGCTTGGCGTGCATTTCGACGTGCACATCGCTGACGAGG
CCGAGGTGCGGGCTGAAGTGATTGATGACAAGCTGGGTGGTATGGTGATG
TGGGCGGAAAAAGCAAGGACTCGCGATGTCTCGCCCGTTGAGGAATTGGC
CAAGCATCGAGAGCAGCTGCAAGCAATGCACTCGCAGCAGCACCCCCTGA
AAAATACTGAAATGGGAAAACAAAATAAGTAGATGTCCCGCCGGCCGGCG
GTGCATCTGCTTCGGCTGAGCAAGGCGGTTAATATCAAGGACCAACTACG
GCTGGAAGAAGCATTGCTGCGGCACGACACGCGGAATTGGTGCTTACTCA
AGGATGGAGAGCCAGCAGGTGTCATGGCACGACCTACGATCGTCTTAGGC
ATTGGCGGGAAGGCATCTAAGTTGGTAGAGTTGGAGCGCGTCAACCAGGA
CCGGGTGCCCTTGCTACGACGGTTTTCCGGGGGCGGTACAGTAATTGTCG
ATCACGACTCGCTCTTCATCACTTTCATCATGAACACAGAGCAAGTCACC
CCCAAGCAGCCCTACCCGCGGCCCATCATGGAGTGGACGGCAGGCGTGTA
CGGCCCCGTCTTTGACCGCCTACGGACAACGCAGACAGAGCCTTTTCAGC
TCCGGGAGAATGACTACGTGTTTGGGCCTTTGAAGTTCGGAGGCAATGCG
CAAAGCATCGTCAAAGACCGGTGGCTGCACCACACGTCCTTCCTTTGGGA
TTTCCAGCACCCAAACATGGACTACTTAGCACTTCCCGAGCGACGCCCCG
AGTACCGGCAGAACCGCTGCCACGGAGCCTTCTTGACGCGGTTGAAGGAG
CACACGTTGCAACAAGACCGGGCGGCGCTCTTCCGGGAGTTGGAGGTGGA
GCTTGGCGTGCATTTCGACGTGCACATCGCTGACGAGGCCGAGGTGCGGG
CTGAAGTGATTGATGACAAGCTGGGTGGTATGGTGATGTGGGCGGAAAAA
GCAAGGACTCGCGATGTCTCGCCCGTTGAGGAATTGGCCAAGCATCGAGA
GCAGCTGCAAGCAATGCACTCGCAGCAGCACCCCCTGAAAAATACTGAAA
TGGGAAAACAAAATAAGTAGATGTCCCGCCGGCCGGCGGTGCATCTGCTT
CGGCTGAGCAAGGCGGTTAATATCAAGGACCAACTACGGCTGGAAGAAGC
ATTGCTGCGGCACGACACGCGGAATTGGTGCTTACTCAAGGATGGAGAGC
CAGCAGGTGTCATGGCACGACCTACGATCGTCTTAGGCATTGGCGGGAAG
GCATCTAAGTTGGTAGAGTTGGAGCGCGTCAACCAGGACCGGGTGCCCTT
GCTACGACGGTTTTCCGGGGGCGGTACAGTAATTGTCGATCACGACTCGC
TCTTCATCACTTTCATCATGAACACA back to top
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