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Properties
Property Name | Value |
TranscriptId | 594868 |
Track | FilteredModels2 |
ProteinId | 594782 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_15 | supercontig | scaffold_15:485572..486420 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6375 ID=mRNA_6375|Name=jgi.p|Nanoce1779_2|594782|organism=Nannochloropsis oceanica|type=mRNA|length=823bp GAAGGGCCAAATTGAAAGATATATCAATTATCTGTACAAATGACTGAGTC ATTACTCGAAACATCACAAAGCTGCTTTTAAAAGTTGCGGGATAGCTGGA GGGAGGTTGGCGGTTACAGGCCCGTCGGAGCTTTCGAGCTCACTCCCCTT ACACACGATGCATTGGAAATGTTTCTGAAAGAAACAGGCAGAAGGAAGGT GTCAATGAGGCACCGTCATGCGTCTAAGTGCAGATATTGTGCTCATGTGC CAACTACATCCCACTTACAGGCACAACATGGAGTTGCCGTGTGACAAACA ACAGTTTTCTGTACCCTCCGGTCAGAGCGACAACTTTGGCGCCGCTGGTG TCCAGGTCTCTATCTCCGCCCCTGCCCCACAACGCTACCGTAGCAAATAC CGCCTCTTGGCCTGTCATCGGGATGATGCACCTGCCAAGACCAACGAAGT ACGCGTCACCTACCAAGGACCAGTTAAGAGTTACCTGGGCTATGCCATGG CCCTGTTCGAGGAGCGCGGTGCCCGGGCCGTGGCGCTGAAAGGCATGGGG AGGGCCATCCACAAGGCCTTGACGGTTGCCGAAATTTTGAAACGCAGCTT GCCTGGACTCCATCAACGCACTGAAATTGGATCCCTGCCGTTCAAAGAGG TGTGGGCACCGTTGGAGGAAGGCTTGAATCGCGTCGAGTCGACGCATCCT CCTCCCCTCGACATTCGCCATTTTTGCCGAATAATCGTCCAACGTGCGTT AAGACTTGAAGGGGGCGGATCGGTCAGCCATATGAGAAGCTGCCATAAAG AGGACTCCCCTTGGTCCCTATGA back to topprotein sequence of jgi.p|Nanoce1779_2|594782 >mRNA_6375-protein ID=mRNA_6375-protein|Name=jgi.p|Nanoce1779_2|594782|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp MELPCDKQQFSVPSGQSDNFGAAGVQVSISAPAPQRYRSKYRLLACHRDD APAKTNEVRVTYQGPVKSYLGYAMALFEERGARAVALKGMGRAIHKALTV AEILKRSLPGLHQRTEIGSLPFKEVWAPLEEGLNRVESTHPPPLDIRHFC RIIVQRALRLEGGGSVSHMRSCHKEDSPWSL* back to topmRNA from alignment at scaffold_15:485572..486420+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6375 ID=mRNA_6375|Name=jgi.p|Nanoce1779_2|594782|organism=Nannochloropsis oceanica|type=mRNA|length=849bp|location=Sequence derived from alignment at scaffold_15:485572..486420+ (Nannochloropsis oceanica) GAAGGGCCAAATTGAAAGATATATCAATTATCTGTACAAATGACTGAGTC
ATTACTCGAAACATCACAAAGCTGCTTTTAAAAGTTGCGGGATAGCTGGA
GGGAGGTTGGCGGTTACAGGCCCGTCGGAGCTTTCGAGCTCACTCCCCTT
ACACACGATGCATTGGAAATGTTTCTGAAAGAAACAGGCAGAAGGAAGGT
GTCAATGAGGCACCGTCATGCGTCTAAGTGCAGATATTGTGCTCATGTGC
CAACTACATCCCACTTACAGGCACAACATGGAGTTGCCGTGTGACAAACA
ACAGTTTTCTGTACCCTCCGGTCAGAGCGACAACTTTGGCGCCGCTGGTG
TCCAGGTCTCTATCTCCGCCCCTGCCCCACAACGCTACCGTAGCAAATAC
CGCCTCTTGGCCTGTCATCGGGATGATGCACCTGCCAAGACCAACGAAGT
ACGCGTCACCTACCAAGGACCAGTTAAGAGTTACCTGGGCTATGCCATGG
CCCTGTTCGAGGAGCGCGGTGCCCGGGCCGTGGCGCTGAAAGGCATGGGG
AGGGCCATCCACAAGGCCTTGACGGTTGCCGAAATTTTGAAACGCAGCTT
GCCTGGACTCCATCAACGCACTGAAATTGGATCCCTGCCGTTCAAAGAGG
TGTGGGCACCGTTGGAGGAAGGCTTGAATCGCGTCGAGTCGACGCGTTAC
ATTTCTTCACGCTATCGAAAGATCCTCCTCCCCTCGACATTCGCCATTTT
TGCCGAATAATCGTCCAACGTGCGTTAAGACTTGAAGGGGGCGGATCGGT
CAGCCATATGAGAAGCTGCCATAAAGAGGACTCCCCTTGGTCCCTATGA back to topCoding sequence (CDS) from alignment at scaffold_15:485572..486420+ >mRNA_6375 ID=mRNA_6375|Name=jgi.p|Nanoce1779_2|594782|organism=Nannochloropsis oceanica|type=CDS|length=1092bp|location=Sequence derived from alignment at scaffold_15:485572..486420+ (Nannochloropsis oceanica) ATGGAGTTGCCGTGTGACAAACAACAGTTTTCTGTACCCTCCGGTCAGAG CGACAACTTTGGCGCCGCTGGTGTCCAGGTCTCTATCTCCGCCCCTGCCC CACAACGCTACCGTAGCAAATACCGCCTCTTGGCCTGTCATCGGGATGAT GCACCTGCCAAGACCAACGAAGTACGCGTCACCTACCAAGGACCAGTTAA GAGTTACCTGGGCTATGCCATGGCCCTGTTCGAGGAGCGCGGTGCCCGGG CCGTGGCGCTGAAAGGCATGGGGAGGGCCATCCACAAGGCCTTGACGGTT GCCGAAATTTTGAAACGCAGCTTGCCTGGACTCCATCAACGCACTGAAAT TGGATCCCTGCCGTTCAAAGAGGTGTGGGCACCGTTGGAGGAAGGCTTGA ATCGCGTCGAGTCGACGCATCCTCCTCCCCTCGACATTCGCCATTTTTGC CGAATAATCGTCCAACGTGCGTTAAGACTTGAAGGGGGCGGATCGGTCAG CCATATGAGAAGCTGCCATAAAGAGGACTCCCCTTGGTCCCTATGAATGG AGTTGCCGTGTGACAAACAACAGTTTTCTGTACCCTCCGGTCAGAGCGAC AACTTTGGCGCCGCTGGTGTCCAGGTCTCTATCTCCGCCCCTGCCCCACA ACGCTACCGTAGCAAATACCGCCTCTTGGCCTGTCATCGGGATGATGCAC CTGCCAAGACCAACGAAGTACGCGTCACCTACCAAGGACCAGTTAAGAGT TACCTGGGCTATGCCATGGCCCTGTTCGAGGAGCGCGGTGCCCGGGCCGT GGCGCTGAAAGGCATGGGGAGGGCCATCCACAAGGCCTTGACGGTTGCCG AAATTTTGAAACGCAGCTTGCCTGGACTCCATCAACGCACTGAAATTGGA TCCCTGCCGTTCAAAGAGGTGTGGGCACCGTTGGAGGAAGGCTTGAATCG CGTCGAGTCGACGCATCCTCCTCCCCTCGACATTCGCCATTTTTGCCGAA TAATCGTCCAACGTGCGTTAAGACTTGAAGGGGGCGGATCGGTCAGCCAT ATGAGAAGCTGCCATAAAGAGGACTCCCCTTGGTCCCTATGA back to top
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