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Properties
| Property Name | Value |
|---|
| TranscriptId | 594708 |
| Track | FilteredModels2 |
| ProteinId | 594622 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:364637..365917 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6332 ID=mRNA_6332|Name=jgi.p|Nanoce1779_2|594622|organism=Nannochloropsis oceanica|type=mRNA|length=864bp
GTCAAGTCAGCCAGGAGTCAAGGATGTTTGGATTTGGCAAGAAGCTTGAT
CCTGTGGAGGAGGCCAAGAAGTGGAAACGCAACATCGGCCGCGAAGTCCG
CAGTATTGATCGCACACTCCAAGACATTGAGAGGGCCGAACAAAAAATTG
TAAATGAAATCAAAAAGCTCGCCAAGGAAGGCGATTCACGCCGCGGTGCT
CTCACCATCCTTGCCAAGGATTTGGTCCGTTCCCGCAAAACGAGGGAGAA
AATGGTGGGTGGCAAGGCCATGCTTACCTCCGTACAAATGCAGATTCAGA
TGCAAATTTCTACTATAAAAGTGGCAGGCTGCATGCAGAAATCAGCTGAT
GTCCTCAAGAGCCTTAACGCCCTCGTCAAAATCCCCGAGCTCAGTCATGT
CTGCCAGGAAATGGCGCGCGAGATGGAAAAAGCCGGTCTGGTGGAAGAAC
TCGTCTCCGATGCCATGGACAGCGTGGACACCACAGACGAAGACGAGGTT
GACCTGGAGGTTCAGAAGGTCCTCGACGAGCTAACCCTCCACACCATAAG
CACTGCCCCTCAAGAGCCCACCAAGCCAGCAGTACCCGCACAAAAGGAGG
GCGAGGAGGAGGGAGAAGAGGCTGAGACAACGGCAGAAGAGGAGGAGAGG
GAGGCGTTGGAATTGAAGCATATGAAGGAGCGGTTGAATGCCTTGTAAAA
TAAATAGTTGTAGGGTGTTAATGAGGGAGGAAGGGAAGGAGGGGTGGAAT
GGAAGGGGGTGTATTTGACCGAAGAATGCAAAGAGACGAGGGGGGCAAAA
AGAGATTGTAGTACAAACTGAAAGGGGATAAAACGAGCAATGCAAACCTC
TCCGTGGAGATTTC back to topprotein sequence of jgi.p|Nanoce1779_2|594622 >mRNA_6332-protein ID=mRNA_6332-protein|Name=jgi.p|Nanoce1779_2|594622|organism=Nannochloropsis oceanica|type=polypeptide|length=225bp
MFGFGKKLDPVEEAKKWKRNIGREVRSIDRTLQDIERAEQKIVNEIKKLA
KEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKV
AGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAMDS
VDTTDEDEVDLEVQKVLDELTLHTISTAPQEPTKPAVPAQKEGEEEGEEA
ETTAEEEEREALELKHMKERLNAL* back to topmRNA from alignment at scaffold_15:364637..365917+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6332 ID=mRNA_6332|Name=jgi.p|Nanoce1779_2|594622|organism=Nannochloropsis oceanica|type=mRNA|length=1281bp|location=Sequence derived from alignment at scaffold_15:364637..365917+ (Nannochloropsis oceanica)
GTCAAGTCAGCCAGGAGTCAAGGTAGCAAACTCTCCATACCATCCAAAGC
GTGCTTCGACCCACCCAGATCGACCCCCTTGTACCCTTGCGCTTCGCGCT
CTCCCCTCGCCAGCAGGATGTTTGGATTTGGCAAGAAGCTTGATCCTGTG
GAGGAGGCCAAGAAGGTACGTGCAACATGAATGTGTAGTTTGAGTAAGTG
CATTTCGAGCGCTTGCCTTCACCCCTCTGCCCGTTATCCTAACTGGCAGG
CACATGATGAGCTGACCTCGTCAATCCGATGCATGCAATTATTGACAATC
GATTAAACCCTTATAAGACCTCAACCGCATTTGCAGCTGCTGCATCAGTT
CCTCCCACCATCTCTCCCTCATTCCCTCTCTCTCCCCCCCATATTCACCC
CAGTGGAAACGCAACATCGGCCGCGAAGTCCGCAGTATTGATCGCACACT
CCAAGACATTGAGAGGGCCGAACAAAAAATTGTAAATGAAATCAAAAAGC
TCGCCAAGGAAGGCGATTCACGCCGCGGTGCTCTCACCATCCTTGCCAAG
GGTAAGTCAGTGTCTGGTTGTCCACCCTCTCTCTTCTCTCCTTCCAATTT
TCATTTTCCCGCCCTCCCTCCCTCTTTCCCCCGTAGATTTGGTCCGTTCC
CGCAAAACGAGGGAGAAAATGGTGGGTGGCAAGGCCATGCTTACCTCCGT
ACAAATGCAGATTCAGATGCAAATTTCTACTATAAAAGTGGCAGGCTGCA
TGCAGAAATCAGCTGATGTCCTCAAGAGCCTTAACGCCCTCGTCAAAATC
CCCGAGCTCAGTCATGTCTGCCAGGAAATGGCGCGCGAGATGGAAAAAGC
CGGTCTGGTGGAAGAACTCGTCTCCGATGCCATGGACAGCGTGGACACCA
CAGACGAAGACGAGGTTGACCTGGAGGTTCAGAAGGTCCTCGACGAGCTA
ACCCTCCACACCATAAGCACTGCCCCTCAAGAGCCCACCAAGCCAGCAGT
ACCCGCACAAAAGGAGGGCGAGGAGGAGGGAGAAGAGGCTGAGACAACGG
CAGAAGAGGAGGAGAGGGAGGCGTTGGAATTGAAGCATATGAAGGAGCGG
TTGAATGCCTTGTAAAATAAATAGTTGTAGGGTGTTAATGAGGGAGGAAG
GGAAGGAGGGGTGGAATGGAAGGGGGTGTATTTGACCGAAGAATGCAAAG
AGACGAGGGGGGCAAAAAGAGATTGTAGTACAAACTGAAAGGGGATAAAA
CGAGCAATGCAAACCTCTCCGTGGAGATTTC back to topCoding sequence (CDS) from alignment at scaffold_15:364637..365917+ >mRNA_6332 ID=mRNA_6332|Name=jgi.p|Nanoce1779_2|594622|organism=Nannochloropsis oceanica|type=CDS|length=2025bp|location=Sequence derived from alignment at scaffold_15:364637..365917+ (Nannochloropsis oceanica)
ATGTTTGGATTTGGCAAGAAGCTTGATCCTGTGGAGGAGGCCAAGAAGTG
GAAACGCAACATCGGCCGCGAAGTCCGCAGTATTGATCGCACACTCCAAG
ACATTGAGAGGGCCGAACAAAAAATTGTAAATGAAATCAAAAAGCTCGCC
AAGGAAGGCGATTCACGCCGCGGTGCTCTCACCATCCTTGCCAAGGATTT
GGTCCGTTCCCGCAAAACGAGGGAGAAAATGGTGGGTGGCAAGGCCATGC
TTACCTCCGTACAAATGCAGATTCAGATGCAAATTTCTACTATAAAAGTG
GCAGGCTGCATGCAGAAATCAGCTGATGTCCTCAAGAGCCTTAACGCCCT
CGTCAAAATCCCCGAGCTCAGTCATGTCTGCCAGGAAATGGCGCGCGAGA
TGGAAAAAGCCGGTCTGGTGGAAGAACTCGTCTCCGATGCCATGGACAGC
GTGGACACCACAGACGAAGACGAGGTTGACCTGGAGGTTCAGAAGGTCCT
CGACGAGCTAACCCTCCACACCATAAGCACTGCCCCTCAAGAGCCCACCA
AGCCAGCAGTACCCGCACAAAAGGAGGGCGAGGAGGAGGGAGAAGAGGCT
GAGACAACGGCAGAAGAGGAGGAGAGGGAGGCGTTGGAATTGAAGCATAT
GAAGGAGCGGTTGAATGCCTTGTAAATGTTTGGATTTGGCAAGAAGCTTG
ATCCTGTGGAGGAGGCCAAGAAGTGGAAACGCAACATCGGCCGCGAAGTC
CGCAGTATTGATCGCACACTCCAAGACATTGAGAGGGCCGAACAAAAAAT
TGTAAATGAAATCAAAAAGCTCGCCAAGGAAGGCGATTCACGCCGCGGTG
CTCTCACCATCCTTGCCAAGGATTTGGTCCGTTCCCGCAAAACGAGGGAG
AAAATGGTGGGTGGCAAGGCCATGCTTACCTCCGTACAAATGCAGATTCA
GATGCAAATTTCTACTATAAAAGTGGCAGGCTGCATGCAGAAATCAGCTG
ATGTCCTCAAGAGCCTTAACGCCCTCGTCAAAATCCCCGAGCTCAGTCAT
GTCTGCCAGGAAATGGCGCGCGAGATGGAAAAAGCCGGTCTGGTGGAAGA
ACTCGTCTCCGATGCCATGGACAGCGTGGACACCACAGACGAAGACGAGG
TTGACCTGGAGGTTCAGAAGGTCCTCGACGAGCTAACCCTCCACACCATA
AGCACTGCCCCTCAAGAGCCCACCAAGCCAGCAGTACCCGCACAAAAGGA
GGGCGAGGAGGAGGGAGAAGAGGCTGAGACAACGGCAGAAGAGGAGGAGA
GGGAGGCGTTGGAATTGAAGCATATGAAGGAGCGGTTGAATGCCTTGTAA
ATGTTTGGATTTGGCAAGAAGCTTGATCCTGTGGAGGAGGCCAAGAAGTG
GAAACGCAACATCGGCCGCGAAGTCCGCAGTATTGATCGCACACTCCAAG
ACATTGAGAGGGCCGAACAAAAAATTGTAAATGAAATCAAAAAGCTCGCC
AAGGAAGGCGATTCACGCCGCGGTGCTCTCACCATCCTTGCCAAGGATTT
GGTCCGTTCCCGCAAAACGAGGGAGAAAATGGTGGGTGGCAAGGCCATGC
TTACCTCCGTACAAATGCAGATTCAGATGCAAATTTCTACTATAAAAGTG
GCAGGCTGCATGCAGAAATCAGCTGATGTCCTCAAGAGCCTTAACGCCCT
CGTCAAAATCCCCGAGCTCAGTCATGTCTGCCAGGAAATGGCGCGCGAGA
TGGAAAAAGCCGGTCTGGTGGAAGAACTCGTCTCCGATGCCATGGACAGC
GTGGACACCACAGACGAAGACGAGGTTGACCTGGAGGTTCAGAAGGTCCT
CGACGAGCTAACCCTCCACACCATAAGCACTGCCCCTCAAGAGCCCACCA
AGCCAGCAGTACCCGCACAAAAGGAGGGCGAGGAGGAGGGAGAAGAGGCT
GAGACAACGGCAGAAGAGGAGGAGAGGGAGGCGTTGGAATTGAAGCATAT
GAAGGAGCGGTTGAATGCCTTGTAA back to top
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