Properties
Property Name | Value |
TranscriptId | 594667 |
Track | FilteredModels2 |
ProteinId | 594581 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_15 | supercontig | scaffold_15:338965..340190 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6320 ID=mRNA_6320|Name=jgi.p|Nanoce1779_2|594581|organism=Nannochloropsis oceanica|type=mRNA|length=1226bp ACAGCGCCCTTGCAGCCACCATGCAGAGCTCCCTCATGGCAACCGGCCGA GTGGTAGCCTCGCGTCTCCGTGCCTCGGTGCCCTCGTCTGGCCATGTCCT GACCCGCGGCCTCTCCGCCCCGCCCCAAAAGCCTCCTCCTCCGCCCTCCC CCGAAGAGCTGCAAAAGATGGTCGCCACCTCCGAGGCGCACGTCAGCCAA GTCCGCGCCGGGACCATGAAAACCGTGCAGCCTCATACTGTCTCCGATGT TCCAGACCTGCCCACTTATCTCCCGGAAAACCAAGAGGAAATGGCCGTCT TGAACGACCAACCCGCGAATCAAAGGGCCCGCAAGGTCACCATCCGCCAA AAGGCTCAAAGCGCCATGCAATCCAGCCCCAACAAGTCCTACCCCTGGCA CATCACTTGGGCACAGCAGGAACGCTGGTCCAATCCTTTAATGGGATGGA CTTCAACTGCTGATCCCTTAAGTAACCAGTCACTCGCATTTGACACGGCT GAGGAGGCGGCTCGCTTTGCGAAGCGTCAGGGGTGGGAAGTGCAGATTGA GCCAGAAATTAGTCGCAAGCAAGTGCTGGGGACGAAGAAGTATGCCTTCA ATTTCTTGCAGGAAGACGTGGAAAACAAATTGAAGAGGGAGGGAGTTAAG ACGAAGCATTTTGCGAATCAAGGTTATGCGGCCTCGAATTGGTTTCAGTC GTTGAAGTACCACGGGGATGGGGAGTGCGAACAGCATGGTCCCCCACAGA AGAAGAAGTAAATGAGACTTACTTCGGGAAGGGGAGGGGAGGAGTGTGGT ATTGGTCATTTATTGGAGCACCATGGGGGTAAGGAGTCCGTGCTGCATAG ACCCCAAAGCGGTTGAAGGAAGAAGTCGATTCGTTCTTCGGGTTAAGCCG AAGCAGCAAGAGGGACTGGAGTAATTGATGACGAAAAGAAAGAGATTAAG GAAGCGTGGGTGTATACGGGAAGAGATGTTGGAAAAAAGAGCATTCAGAG TTTTTGTCTGTTGGGGGGTGAGGGATTGAATAGAGGGTATAGTTGTGTAG TCCTCTAAACGGGCTGCTTTTGGTTGCCGAGAGTCAGCTGTCTTGCATTT CAAATGATGGGGAAGAGGGCAGAGGGAGAAGATGCGTCGTGAGGTATGGG TCGATTTACTACTGAGGAGCAAGGAAGATGGAGAGAGTGAAGGGAAGGAA GGAAAACGACCGTGAGGGAGCGGGAA back to topprotein sequence of jgi.p|Nanoce1779_2|594581 >mRNA_6320-protein ID=mRNA_6320-protein|Name=jgi.p|Nanoce1779_2|594581|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp MQSSLMATGRVVASRLRASVPSSGHVLTRGLSAPPQKPPPPPSPEELQKM VATSEAHVSQVRAGTMKTVQPHTVSDVPDLPTYLPENQEEMAVLNDQPAN QRARKVTIRQKAQSAMQSSPNKSYPWHITWAQQERWSNPLMGWTSTADPL SNQSLAFDTAEEAARFAKRQGWEVQIEPEISRKQVLGTKKYAFNFLQEDV ENKLKREGVKTKHFANQGYAASNWFQSLKYHGDGECEQHGPPQKKK* back to topmRNA from alignment at scaffold_15:338965..340190- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6320 ID=mRNA_6320|Name=jgi.p|Nanoce1779_2|594581|organism=Nannochloropsis oceanica|type=mRNA|length=1226bp|location=Sequence derived from alignment at scaffold_15:338965..340190- (Nannochloropsis oceanica) ACAGCGCCCTTGCAGCCACCATGCAGAGCTCCCTCATGGCAACCGGCCGA
GTGGTAGCCTCGCGTCTCCGTGCCTCGGTGCCCTCGTCTGGCCATGTCCT
GACCCGCGGCCTCTCCGCCCCGCCCCAAAAGCCTCCTCCTCCGCCCTCCC
CCGAAGAGCTGCAAAAGATGGTCGCCACCTCCGAGGCGCACGTCAGCCAA
GTCCGCGCCGGGACCATGAAAACCGTGCAGCCTCATACTGTCTCCGATGT
TCCAGACCTGCCCACTTATCTCCCGGAAAACCAAGAGGAAATGGCCGTCT
TGAACGACCAACCCGCGAATCAAAGGGCCCGCAAGGTCACCATCCGCCAA
AAGGCTCAAAGCGCCATGCAATCCAGCCCCAACAAGTCCTACCCCTGGCA
CATCACTTGGGCACAGCAGGAACGCTGGTCCAATCCTTTAATGGGATGGA
CTTCAACTGCTGATCCCTTAAGTAACCAGTCACTCGCATTTGACACGGCT
GAGGAGGCGGCTCGCTTTGCGAAGCGTCAGGGGTGGGAAGTGCAGATTGA
GCCAGAAATTAGTCGCAAGCAAGTGCTGGGGACGAAGAAGTATGCCTTCA
ATTTCTTGCAGGAAGACGTGGAAAACAAATTGAAGAGGGAGGGAGTTAAG
ACGAAGCATTTTGCGAATCAAGGTTATGCGGCCTCGAATTGGTTTCAGTC
GTTGAAGTACCACGGGGATGGGGAGTGCGAACAGCATGGTCCCCCACAGA
AGAAGAAGTAAATGAGACTTACTTCGGGAAGGGGAGGGGAGGAGTGTGGT
ATTGGTCATTTATTGGAGCACCATGGGGGTAAGGAGTCCGTGCTGCATAG
ACCCCAAAGCGGTTGAAGGAAGAAGTCGATTCGTTCTTCGGGTTAAGCCG
AAGCAGCAAGAGGGACTGGAGTAATTGATGACGAAAAGAAAGAGATTAAG
GAAGCGTGGGTGTATACGGGAAGAGATGTTGGAAAAAAGAGCATTCAGAG
TTTTTGTCTGTTGGGGGGTGAGGGATTGAATAGAGGGTATAGTTGTGTAG
TCCTCTAAACGGGCTGCTTTTGGTTGCCGAGAGTCAGCTGTCTTGCATTT
CAAATGATGGGGAAGAGGGCAGAGGGAGAAGATGCGTCGTGAGGTATGGG
TCGATTTACTACTGAGGAGCAAGGAAGATGGAGAGAGTGAAGGGAAGGAA
GGAAAACGACCGTGAGGGAGCGGGAA back to topCoding sequence (CDS) from alignment at scaffold_15:338965..340190- >mRNA_6320 ID=mRNA_6320|Name=jgi.p|Nanoce1779_2|594581|organism=Nannochloropsis oceanica|type=CDS|length=741bp|location=Sequence derived from alignment at scaffold_15:338965..340190- (Nannochloropsis oceanica) ATGCAGAGCTCCCTCATGGCAACCGGCCGAGTGGTAGCCTCGCGTCTCCG TGCCTCGGTGCCCTCGTCTGGCCATGTCCTGACCCGCGGCCTCTCCGCCC CGCCCCAAAAGCCTCCTCCTCCGCCCTCCCCCGAAGAGCTGCAAAAGATG GTCGCCACCTCCGAGGCGCACGTCAGCCAAGTCCGCGCCGGGACCATGAA AACCGTGCAGCCTCATACTGTCTCCGATGTTCCAGACCTGCCCACTTATC TCCCGGAAAACCAAGAGGAAATGGCCGTCTTGAACGACCAACCCGCGAAT CAAAGGGCCCGCAAGGTCACCATCCGCCAAAAGGCTCAAAGCGCCATGCA ATCCAGCCCCAACAAGTCCTACCCCTGGCACATCACTTGGGCACAGCAGG AACGCTGGTCCAATCCTTTAATGGGATGGACTTCAACTGCTGATCCCTTA AGTAACCAGTCACTCGCATTTGACACGGCTGAGGAGGCGGCTCGCTTTGC GAAGCGTCAGGGGTGGGAAGTGCAGATTGAGCCAGAAATTAGTCGCAAGC AAGTGCTGGGGACGAAGAAGTATGCCTTCAATTTCTTGCAGGAAGACGTG GAAAACAAATTGAAGAGGGAGGGAGTTAAGACGAAGCATTTTGCGAATCA AGGTTATGCGGCCTCGAATTGGTTTCAGTCGTTGAAGTACCACGGGGATG GGGAGTGCGAACAGCATGGTCCCCCACAGAAGAAGAAGTAA back to top
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