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Properties
| Property Name | Value |
|---|
| TranscriptId | 594609 |
| Track | FilteredModels2 |
| ProteinId | 594523 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:295062..296350 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6304 ID=mRNA_6304|Name=jgi.p|Nanoce1779_2|594523|organism=Nannochloropsis oceanica|type=mRNA|length=968bp
ACAGATGAATAAGTGTCGTACGGATGGCGCGGTAACTTTTCCAATCTCTT
CTTCAGGGCCGCACACAAGCACAAGAAGAAGTTCGAGCGAGAAGGAGAAC
CTCAACGAAGTCTTCAATTCATCGTCATGTCAGGTGCCGGCCGAAAAAGC
GCCTACCGCAAGAGCGTCACAGAGGAAGTCCTCAATTCCTTTCCCGAGCC
CGATGTTGCAGCCGGAGAGCGGGTCGCCCAAGTGGTGCAGTCGAGGGGCG
GTAACATTTTGCAGGTCCTGGTTGCCGACGAGGAAGACGATGGCCCCGAC
TCTTCCTCCCTTGCAATCCTGCCCACTAAATTCCGTAAGCTCATCTGGGT
CAAGCGCGGCGACTTTCTCATCGTCTCGGGCACCTCACACGATTTCCTGA
CCGCCGCAGGCGAGAAAGGAAAAGTAAAGTTTATGGTCGAGCATATTCTG
TATAAAGAGCAGGTGAAGCATTTAAAGGAGGTGGGTTTGTGGCCTGCGGC
TTTTGCGGATGCGGTTGTGGTGGAGGGACTGCGGGAGGGAGGTAAGGACA
AAGGGGAGAAGGAGAAGAGACAGGATGGAAGGGGGGAAGCAAGATCATCA
GCGACAGCAGCATCGGCAACAATCGGGGACGTCATAGCAGGCTTCGCAGC
AGGGGAGGACGGAGAAGAGGAAGACGAGGACAGTGAGTACGAAAGCGAGG
AGGATTACAGCGACTTACATGTAAATACCAATCGCCTGGCCAAGGCACAT
TTATATGTGGATAACGACGAGGACGAAGACGATGACGACAACGAGGAGGA
CGAGGATGAGGATGAGGGGGAGGCGCTAGAGACGTGACAGTTATTGCGCG
TAAATAGTTCTTGTTTGTGTATACATAGATGGACCTCCTCACACCTCAGC
ATCAAATAAGGAAATTACACTCAAGTAAAACCAAAGCAAAGTAAACCAAT
GGACTAATGCAATTCAAA back to topprotein sequence of jgi.p|Nanoce1779_2|594523 >mRNA_6304-protein ID=mRNA_6304-protein|Name=jgi.p|Nanoce1779_2|594523|organism=Nannochloropsis oceanica|type=polypeptide|length=237bp
MSGAGRKSAYRKSVTEEVLNSFPEPDVAAGERVAQVVQSRGGNILQVLVA
DEEDDGPDSSSLAILPTKFRKLIWVKRGDFLIVSGTSHDFLTAAGEKGKV
KFMVEHILYKEQVKHLKEVGLWPAAFADAVVVEGLREGGKDKGEKEKRQD
GRGEARSSATAASATIGDVIAGFAAGEDGEEEDEDSEYESEEDYSDLHVN
TNRLAKAHLYVDNDEDEDDDDNEEDEDEDEGEALET* back to topmRNA from alignment at scaffold_15:295062..296350- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6304 ID=mRNA_6304|Name=jgi.p|Nanoce1779_2|594523|organism=Nannochloropsis oceanica|type=mRNA|length=1289bp|location=Sequence derived from alignment at scaffold_15:295062..296350- (Nannochloropsis oceanica)
ACAGATGAATAAGTGTCGTACGGATGGCGCGGTAACTTTTCCAATCTCTT
CTTCAGGGCCGCACACAAGCACAAGAAGAAGTTCGAGCGAGAAGGAGAAC
CTCAACGGTGCAGCCCGTTGCTTTCCTCAATCTTTGTTTATCTGGCCGCA
CCAGCCATCCACTCACCACGAAACCCACACCACACACACACGCTCACACG
CACACACAGAAGTCTTCAATTCATCGTCATGTCAGGTGCCGGCCGAAAAA
GCGCCTACCGCAAGAGCGTCACAGAGGAAGTCCTCAATTCCTTTCCCGAG
CCCGATGTTGCAGCCGGAGAGCGGGTCGCCCAAGTGGTGCAGTCGAGGGG
CGGTAACATTTTGCAGGTACATACATGGTAGCGCTATGAGTATGGAGGGA
GAAGACACATATGTTGTGTAAGCGTAAGCGTCGTTTTCTGTGGTCTTGGC
ATGTATTGAGGTAGTCTCGTTCCCGTGCTCTCGTCCACTAAGATGGATGT
TAGGAGGGACAAGAAGGCGCGGAGCAAGGCCCCTGGCAGTAAACTCGAAA
CCCACACTCCCACCCCTATCTATCATCAATATTAGGTCCTGGTTGCCGAC
GAGGAAGACGATGGCCCCGACTCTTCCTCCCTTGCAATCCTGCCCACTAA
ATTCCGTAAGCTCATCTGGGTCAAGCGCGGCGACTTTCTCATCGTCTCGG
GCACCTCACACGATTTCCTGACCGCCGCAGGCGAGAAAGGAAAAGTAAAG
TTTATGGTCGAGCATATTCTGTATAAAGAGCAGGTGAAGCATTTAAAGGA
GGTGGGTTTGTGGCCTGCGGCTTTTGCGGATGCGGTTGTGGTGGAGGGAC
TGCGGGAGGGAGGTAAGGACAAAGGGGAGAAGGAGAAGAGACAGGATGGA
AGGGGGGAAGCAAGATCATCAGCGACAGCAGCATCGGCAACAATCGGGGA
CGTCATAGCAGGCTTCGCAGCAGGGGAGGACGGAGAAGAGGAAGACGAGG
ACAGTGAGTACGAAAGCGAGGAGGATTACAGCGACTTACATGTAAATACC
AATCGCCTGGCCAAGGCACATTTATATGTGGATAACGACGAGGACGAAGA
CGATGACGACAACGAGGAGGACGAGGATGAGGATGAGGGGGAGGCGCTAG
AGACGTGACAGTTATTGCGCGTAAATAGTTCTTGTTTGTGTATACATAGA
TGGACCTCCTCACACCTCAGCATCAAATAAGGAAATTACACTCAAGTAAA
ACCAAAGCAAAGTAAACCAATGGACTAATGCAATTCAAA back to topCoding sequence (CDS) from alignment at scaffold_15:295062..296350- >mRNA_6304 ID=mRNA_6304|Name=jgi.p|Nanoce1779_2|594523|organism=Nannochloropsis oceanica|type=CDS|length=1422bp|location=Sequence derived from alignment at scaffold_15:295062..296350- (Nannochloropsis oceanica)
GTCCTGGTTGCCGACGAGGAAGACGATGGCCCCGACTCTTCCTCCCTTGC
AATCCTGCCCACTAAATTCCGTAAGCTCATCTGGGTCAAGCGCGGCGACT
TTCTCATCGTCTCGGGCACCTCACACGATTTCCTGACCGCCGCAGGCGAG
AAAGGAAAAGTAAAGTTTATGGTCGAGCATATTCTGTATAAAGAGCAGGT
GAAGCATTTAAAGGAGGTGGGTTTGTGGCCTGCGGCTTTTGCGGATGCGG
TTGTGGTGGAGGGACTGCGGGAGGGAGGTAAGGACAAAGGGGAGAAGGAG
AAGAGACAGGATGGAAGGGGGGAAGCAAGATCATCAGCGACAGCAGCATC
GGCAACAATCGGGGACGTCATAGCAGGCTTCGCAGCAGGGGAGGACGGAG
AAGAGGAAGACGAGGACAGTGAGTACGAAAGCGAGGAGGATTACAGCGAC
TTACATGTAAATACCAATCGCCTGGCCAAGGCACATTTATATGTGGATAA
CGACGAGGACGAAGACGATGACGACAACGAGGAGGACGAGGATGAGGATG
AGGGGGAGGCGCTAGAGACGTGAATGTCAGGTGCCGGCCGAAAAAGCGCC
TACCGCAAGAGCGTCACAGAGGAAGTCCTCAATTCCTTTCCCGAGCCCGA
TGTTGCAGCCGGAGAGCGGGTCGCCCAAGTGGTGCAGTCGAGGGGCGGTA
ACATTTTGCAGGTCCTGGTTGCCGACGAGGAAGACGATGGCCCCGACTCT
TCCTCCCTTGCAATCCTGCCCACTAAATTCCGTAAGCTCATCTGGGTCAA
GCGCGGCGACTTTCTCATCGTCTCGGGCACCTCACACGATTTCCTGACCG
CCGCAGGCGAGAAAGGAAAAGTAAAGTTTATGGTCGAGCATATTCTGTAT
AAAGAGCAGGTGAAGCATTTAAAGGAGGTGGGTTTGTGGCCTGCGGCTTT
TGCGGATGCGGTTGTGGTGGAGGGACTGCGGGAGGGAGGTAAGGACAAAG
GGGAGAAGGAGAAGAGACAGGATGGAAGGGGGGAAGCAAGATCATCAGCG
ACAGCAGCATCGGCAACAATCGGGGACGTCATAGCAGGCTTCGCAGCAGG
GGAGGACGGAGAAGAGGAAGACGAGGACAGTGAGTACGAAAGCGAGGAGG
ATTACAGCGACTTACATGTAAATACCAATCGCCTGGCCAAGGCACATTTA
TATGTGGATAACGACGAGGACGAAGACGATGACGACAACGAGGAGGACGA
GGATGAGGATGAGGGGGAGGCGCTAGAGACGTGAATGTCAGGTGCCGGCC
GAAAAAGCGCCTACCGCAAGAGCGTCACAGAGGAAGTCCTCAATTCCTTT
CCCGAGCCCGATGTTGCAGCCGGAGAGCGGGTCGCCCAAGTGGTGCAGTC
GAGGGGCGGTAACATTTTGCAG back to top
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