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Properties
| Property Name | Value |
|---|
| TranscriptId | 594594 |
| Track | FilteredModels2 |
| ProteinId | 594508 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:284388..285766 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6299 ID=mRNA_6299|Name=jgi.p|Nanoce1779_2|594508|organism=Nannochloropsis oceanica|type=mRNA|length=1379bp
CCGTCGAGCGTGACGCCCTCCTGCGGGAAAAAAATCAGCTCCTGTCCACT
CTACATTCCGTCAAGGGGGAGTTAGCGAGTCAGACACAACAGGCGGCGTC
TCTGCAACGAAACCTCCTCTCCCTCCTTGACAGGGAGCGTGAACTCCACG
TCGCCCATGAAAAAGCCACCGCCCATATAGCTGCCTTGGAAACAAGGATG
AACGAAATGGAGAAGGAAGTGCAGAATTCACGAGAAAGGGGAAAAGAGGC
CATTCAAGGAGGCAGGGCAGCAGTGAGGATGCAGCAGGTCCTGCAGGGGC
AATTGCAGAATTTGCTGGGAGAAATGAGTGTGTTGGTGTCACCGTTTGGA
GAAGAAGAAAAGGAGGAGGAGCAGCAGCTGCAGCAGCAAGGGGAGGAGAG
GGGTGGCATAGCACAGTATGAAGGAGAAGACTCCGCCTCTTCTCCTGAAG
CGTCGGCGCCACGGCCTTCACAGCAACAGCAGCAGCAAGAGCAACACGAG
GTGCTGCAGAAGCAGCAGAGACCTCCAATAAGCACGGGTCCCGAAGAAAA
AGAAGAAAAAGAAGGAAAGGAGGAGGGGGAGGGGGAGCAGCAGCTCCACC
ACCAGCAGCATTTGGCGAAGAAGGAATCCATCCTTCAAACTTCCTACCGA
GCCACCCGTCTAGAACTCTCCCTCGCCTACCGCTATAACAAGCAACTAAA
CTCCTCGTGCGTCTCCCTCCACCAAGCCAACCAACAGCTTTCAACACGCC
TCGCTGTCCTAGAAACAGAATTGTCCACTGTACAAGCACAAGCAAGAGAA
ATGCATACGTCGCTGCAGCAAGCCGAAACAGAGTTTATGAGGCAATCCGC
CCACAAAGAAGACTTGGAAAAGCAATTAGAGGATAAGGAAGAAGATCGGC
GGACATGGGAACATTTGGCCAGGGAAGCGGAGGAAAGGGTGGAGGAAGGG
AGGCGTGCACGCAGGGAGCTCGAGGGATTTGCGCAGCGATTTCGGCGGGA
TGTGGAACGGGCAGCGGAGGAGAGGGTAGGGCAGGTGTTGACACAGGCAA
CTGCGAAAGTGGAAGAGCTGGTCCAAAAACATGCAATCGCGAGGGAGAGG
GCAGAGGAGGGATGGAGGGAGGAGCAGAGGGAGGGGAAGGAGGAGGTCGG
GCGGTTGATGGGGGCACTGCTGGAGAGCAGGGCGGAGACGAGGAGGCGGG
AGAGAGAGGTGGGGAGGCTGAGGGAAGAGCTCGAGAAAGCCGCAAGGGAA
ATTACGAGGATGAGGGCGGGGAAGGGATGAAGGGATGGAGGTTTGGAGGA
AGGGAGGTATAAAGCAGGCAGCGTTGTAATCAGAGAGTGTAAATAGAGTA
TCAAAGCAGAAATTCAAGTAACGATCAAA back to topprotein sequence of jgi.p|Nanoce1779_2|594508 >mRNA_6299-protein ID=mRNA_6299-protein|Name=jgi.p|Nanoce1779_2|594508|organism=Nannochloropsis oceanica|type=polypeptide|length=361bp
MNEMEKEVQNSRERGKEAIQGGRAAVRMQQVLQGQLQNLLGEMSVLVSPF
GEEEKEEEQQLQQQGEERGGIAQYEGEDSASSPEASAPRPSQQQQQQEQH
EVLQKQQRPPISTGPEEKEEKEGKEEGEGEQQLHHQQHLAKKESILQTSY
RATRLELSLAYRYNKQLNSSCVSLHQANQQLSTRLAVLETELSTVQAQAR
EMHTSLQQAETEFMRQSAHKEDLEKQLEDKEEDRRTWEHLAREAEERVEE
GRRARRELEGFAQRFRRDVERAAEERVGQVLTQATAKVEELVQKHAIARE
RAEEGWREEQREGKEEVGRLMGALLESRAETRRREREVGRLREELEKAAR
EITRMRAGKG* back to topmRNA from alignment at scaffold_15:284388..285766- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6299 ID=mRNA_6299|Name=jgi.p|Nanoce1779_2|594508|organism=Nannochloropsis oceanica|type=mRNA|length=1379bp|location=Sequence derived from alignment at scaffold_15:284388..285766- (Nannochloropsis oceanica)
CCGTCGAGCGTGACGCCCTCCTGCGGGAAAAAAATCAGCTCCTGTCCACT
CTACATTCCGTCAAGGGGGAGTTAGCGAGTCAGACACAACAGGCGGCGTC
TCTGCAACGAAACCTCCTCTCCCTCCTTGACAGGGAGCGTGAACTCCACG
TCGCCCATGAAAAAGCCACCGCCCATATAGCTGCCTTGGAAACAAGGATG
AACGAAATGGAGAAGGAAGTGCAGAATTCACGAGAAAGGGGAAAAGAGGC
CATTCAAGGAGGCAGGGCAGCAGTGAGGATGCAGCAGGTCCTGCAGGGGC
AATTGCAGAATTTGCTGGGAGAAATGAGTGTGTTGGTGTCACCGTTTGGA
GAAGAAGAAAAGGAGGAGGAGCAGCAGCTGCAGCAGCAAGGGGAGGAGAG
GGGTGGCATAGCACAGTATGAAGGAGAAGACTCCGCCTCTTCTCCTGAAG
CGTCGGCGCCACGGCCTTCACAGCAACAGCAGCAGCAAGAGCAACACGAG
GTGCTGCAGAAGCAGCAGAGACCTCCAATAAGCACGGGTCCCGAAGAAAA
AGAAGAAAAAGAAGGAAAGGAGGAGGGGGAGGGGGAGCAGCAGCTCCACC
ACCAGCAGCATTTGGCGAAGAAGGAATCCATCCTTCAAACTTCCTACCGA
GCCACCCGTCTAGAACTCTCCCTCGCCTACCGCTATAACAAGCAACTAAA
CTCCTCGTGCGTCTCCCTCCACCAAGCCAACCAACAGCTTTCAACACGCC
TCGCTGTCCTAGAAACAGAATTGTCCACTGTACAAGCACAAGCAAGAGAA
ATGCATACGTCGCTGCAGCAAGCCGAAACAGAGTTTATGAGGCAATCCGC
CCACAAAGAAGACTTGGAAAAGCAATTAGAGGATAAGGAAGAAGATCGGC
GGACATGGGAACATTTGGCCAGGGAAGCGGAGGAAAGGGTGGAGGAAGGG
AGGCGTGCACGCAGGGAGCTCGAGGGATTTGCGCAGCGATTTCGGCGGGA
TGTGGAACGGGCAGCGGAGGAGAGGGTAGGGCAGGTGTTGACACAGGCAA
CTGCGAAAGTGGAAGAGCTGGTCCAAAAACATGCAATCGCGAGGGAGAGG
GCAGAGGAGGGATGGAGGGAGGAGCAGAGGGAGGGGAAGGAGGAGGTCGG
GCGGTTGATGGGGGCACTGCTGGAGAGCAGGGCGGAGACGAGGAGGCGGG
AGAGAGAGGTGGGGAGGCTGAGGGAAGAGCTCGAGAAAGCCGCAAGGGAA
ATTACGAGGATGAGGGCGGGGAAGGGATGAAGGGATGGAGGTTTGGAGGA
AGGGAGGTATAAAGCAGGCAGCGTTGTAATCAGAGAGTGTAAATAGAGTA
TCAAAGCAGAAATTCAAGTAACGATCAAA back to topCoding sequence (CDS) from alignment at scaffold_15:284388..285766- >mRNA_6299 ID=mRNA_6299|Name=jgi.p|Nanoce1779_2|594508|organism=Nannochloropsis oceanica|type=CDS|length=1083bp|location=Sequence derived from alignment at scaffold_15:284388..285766- (Nannochloropsis oceanica)
ATGAACGAAATGGAGAAGGAAGTGCAGAATTCACGAGAAAGGGGAAAAGA
GGCCATTCAAGGAGGCAGGGCAGCAGTGAGGATGCAGCAGGTCCTGCAGG
GGCAATTGCAGAATTTGCTGGGAGAAATGAGTGTGTTGGTGTCACCGTTT
GGAGAAGAAGAAAAGGAGGAGGAGCAGCAGCTGCAGCAGCAAGGGGAGGA
GAGGGGTGGCATAGCACAGTATGAAGGAGAAGACTCCGCCTCTTCTCCTG
AAGCGTCGGCGCCACGGCCTTCACAGCAACAGCAGCAGCAAGAGCAACAC
GAGGTGCTGCAGAAGCAGCAGAGACCTCCAATAAGCACGGGTCCCGAAGA
AAAAGAAGAAAAAGAAGGAAAGGAGGAGGGGGAGGGGGAGCAGCAGCTCC
ACCACCAGCAGCATTTGGCGAAGAAGGAATCCATCCTTCAAACTTCCTAC
CGAGCCACCCGTCTAGAACTCTCCCTCGCCTACCGCTATAACAAGCAACT
AAACTCCTCGTGCGTCTCCCTCCACCAAGCCAACCAACAGCTTTCAACAC
GCCTCGCTGTCCTAGAAACAGAATTGTCCACTGTACAAGCACAAGCAAGA
GAAATGCATACGTCGCTGCAGCAAGCCGAAACAGAGTTTATGAGGCAATC
CGCCCACAAAGAAGACTTGGAAAAGCAATTAGAGGATAAGGAAGAAGATC
GGCGGACATGGGAACATTTGGCCAGGGAAGCGGAGGAAAGGGTGGAGGAA
GGGAGGCGTGCACGCAGGGAGCTCGAGGGATTTGCGCAGCGATTTCGGCG
GGATGTGGAACGGGCAGCGGAGGAGAGGGTAGGGCAGGTGTTGACACAGG
CAACTGCGAAAGTGGAAGAGCTGGTCCAAAAACATGCAATCGCGAGGGAG
AGGGCAGAGGAGGGATGGAGGGAGGAGCAGAGGGAGGGGAAGGAGGAGGT
CGGGCGGTTGATGGGGGCACTGCTGGAGAGCAGGGCGGAGACGAGGAGGC
GGGAGAGAGAGGTGGGGAGGCTGAGGGAAGAGCTCGAGAAAGCCGCAAGG
GAAATTACGAGGATGAGGGCGGGGAAGGGATGA back to top
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