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Properties
Property Name | Value |
TranscriptId | 89424 |
Track | FilteredModels2 |
ProteinId | 89338 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_15 | supercontig | scaffold_15:245852..247797 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6287 ID=mRNA_6287|Name=jgi.p|Nanoce1779_2|89338|organism=Nannochloropsis oceanica|type=mRNA|length=1377bp TTTTTTGGGAGGTTCTAGTGATACTTGTCCGAAATGCTCTCCTCACACCA ACCCATCTTACCATGCCCCATCCCTCCTTCCCTCCGCTCCCTCCCTCCCT CACTCCCACACTCCAACTCCACAAGGCCTCCCTCCTCCAAGAGGAAGGCG GAGGACCCGATAATTTTTTTGCCATGACCCGCACACTTTCTCGGCTCAAA GAACAAGCCGCAATGAACACCCTTGCCTTCCAACGAGGCCGAGGCGACAG CGGCGGCAGCGGAGGAGTAAGAGGTGTTGAGGGCCTGGGACCGGATTCCG TGACATTAAAGCAGATGAGAGCAACATTGGTGAACACGGCAAGGTGCTGT GGAAGAATAGCGCACGAGGCAGAGGCATGTCTAGAGCTGCTAAAGCAGGA GAGAGGAGGAGGAGGGGGAAGAATGGAGAAAGGGATGGAGGAAGAGGAGA TGGACGAGATGATGATGTTTGCACAACAATCGTACGACGGCAGCTCGAGC CACCTTTTCCTCCCCGCCCTCCCCCCCTCCCTCCCTTCCCCTTCCTCCCT CCCTTCCCACCCTTCTTCGACTCCATCCCACCAGGGCCCCCGAGGGACAT TGAGCACACACACGTCCGGTGGCGCCAGCACCAGCACCAGCACCAGCACC AGCACCAGCACCAGCGAAACCAGCAATACTGCTGTCATCCTTGCCAAGCA AGGTCGAAGGCTCGCGGCGATCGTCCACAAGGCCCGGCAAACACGGGAGG GCGGAAGGGAGGAAGGGGGGGAGGAACCCCGTCCCTCCTCCTCATTCTTC AAGCCGGTCAAACTCCCACATCTGGATCGGGCGCCGGAAGAAGGTGATGA GGCCGCTGCGAAGGTCTCCCCTGACGCAGCTGCCTGGGCGCTAACCACCG TCTTGGCCTTCAATATGGTCACGGACAAGGTGGAAGTTGTGGACTTGGAC GATGTCCGGCGACGCTCGTACCTCATCGAGAGGAAAGACGTGATGCTCCT CCCCCGTCCTCATGCAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAG GAGGGAAAGCGGAAGGGAAGAAACGGTCAGGCGGAGAGGCGGTGCCAAAG TACTACCCGAAGGAGTCGAGGGTGTTTGCCCTGTATCCTGGAACGACGTG TTTCTATCCAGCCGTCGTCGTGTCCTCCCTCCCTCCCTCCCTCCCGCCCT CCTCCTCTTCAGAGCCGGGGAGGGAGGGAGGGAGGGAGGAAGCGATGTGC GCCCTATGGTTCGACGACGACGAAGACGAGAGGGGTAACCCCAACGTGGT TGAGGTGCCATTCAAGTACATCACAATGGTTCCTGAGGAATAGGGCGGCG TCGATAGAGAGAGGGAGGGTAGGAGGG back to topprotein sequence of jgi.p|Nanoce1779_2|89338 >mRNA_6287-protein ID=mRNA_6287-protein|Name=jgi.p|Nanoce1779_2|89338|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp MPHPSFPPLPPSLTPTLQLHKASLLQEEGGGPDNFFAMTRTLSRLKEQAA MNTLAFQRGRGDSGGSGGVRGVEGLGPDSVTLKQMRATLVNTARCCGRIA HEAEACLELLKQERGGGGGRMEKGMEEEEMDEMMMFAQQSYDGSSSHLFL PALPPSLPSPSSLPSHPSSTPSHQGPRGTLSTHTSGGASTSTSTSTSTST SETSNTAVILAKQGRRLAAIVHKARQTREGGREEGGEEPRPSSSFFKPVK LPHLDRAPEEGDEAAAKVSPDAAAWALTTVLAFNMVTDKVEVVDLDDVRR RSYLIERKDVMLLPRPHAGGGEGGGGGGGGGKAEGKKRSGGEAVPKYYPK ESRVFALYPGTTCFYPAVVVSSLPPSLPPSSSSEPGREGGREEAMCALWF DDDEDERGNPNVVEVPFKYITMVPEE* back to topmRNA from alignment at scaffold_15:245852..247797+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6287 ID=mRNA_6287|Name=jgi.p|Nanoce1779_2|89338|organism=Nannochloropsis oceanica|type=mRNA|length=1946bp|location=Sequence derived from alignment at scaffold_15:245852..247797+ (Nannochloropsis oceanica) TTTTTTGGGAGGTTCTAGTGATACTTGTCCGAAATGCTCTCCTCACACCA
ACCCATCTTACCATGCCCCATCCCTCCTTCCCTCCGCTCCCTCCCTCCCT
CACTCCCACACTCCAACTCCACAAGGCCTCCCTCCTCCAAGAGGAAGGCG
GAGGACCCGATAATTTTTTTGCCATGACCCGCACACTTTCTCGGCTCAAA
GAACAAGCCGCAATGAACACCCTTGCCTTCCAACGAGGCCGAGGCGACAG
CGGCGGCAGCGGAGGAGTAAGAGGTGTTGAGGGCCTGGGACCGGATTCCG
TGACATTAAAGCAGATGAGAGCAACATTGGTGAACACGGCAAGGTGCTGT
GGAAGAATAGCGCACGAGGCAGAGGCATGTCTAGAGCTGCTAAAGCAGGA
GCAGGAGCAGGAGCATCAGGGAGGAGGGGGTGGAGGGACGAAGAAGGAGA
GTGGAAGGAGAGGAGGAGGAGGGGGAAGAATGGAGAAAGGGATGGAGGAA
GAGGAGATGGACGAGATGATGATGTTTGCACAACAATCGTACGACGGCAG
CTCGAGCCACCTTTTCCTCCCCGCCCTCCCCCCCTCCCTCCCTTCCCCTT
CCTCCCTCCCTTCCCACCCTTCTTCGACTCCATCCCACCAGGGCCCCCGA
GGGACATTGAGCACACACACGTCCGGTGGCGCCAGCACCAGCACCAGCAC
CAGCACCAGCACCAGCACCAGCGAAACCAGCAATACTGCTGTCATCCTTG
CCAAGCAAGGTCGAAGGCTCGCGGCGATCGTCCACAAGGCCCGGCAAACA
CGGGAGGGCGGAAGGGAGGAAGGGGGGGAGGAACCCCGTCCCTCCTCCTC
ATTCTTCAAGCCGGTCAAACTCCCACATCTGGATCGGGCGCCGGAAGAAG
GTGATGAGGCCGCTGCGAAGGTCTCCCCTGACGCAGCTGCCTGGGCGCTA
ACCACCGTCTTGGCCTTCAATATGGTCACGGACAAGGTACATTCACATCT
CCCTCCCTCCCTCCCTCCCTTCCTCCCTACCTCCCTCCCTCGTCCATCGT
CCAGGGTCATGTTGCCTCCATCCCCCCTCCATCCCCCCCCCCTTTCCTCC
CTCCCTCCCTCCCCCCTTCCCTCCCTTCCTCAGGTGGAAGTTGTGGACTT
GGACGATGTCCGGCGACGCTCGTACCTCATCGAGAGGAAAGACGTGATGC
TCCTCCCCCGTCCTCATGCAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGA
GGAGGAGGGAAAGCGGAAGGGAAGAAACGGTCAGGCGGAGAGGCGGTGCC
AAAGTACTACCCGAAGGAGTCGAGGGTGTTTGCCCTGTATCCTGGAACGA
CGGTGAGGGAGGGAGGGAGGGAGGGATGGAGGGTGGGAGTGGAATGGAGC
ATTGTTTTCTTCCGGAAATCATCTTTCCCCCTCTCCCTTTGTTGTCGTTT
CTAATGCCTCTTCTCGCCTTGGTGTTTGTCGTCCCGTTTCTGTTGTTGGT
GTTTGTCGTCCCGTTTATCGCCTTGGTGTTTGTCGTCCCGTTTCTGTTGT
TGGTGTTCCTCATCTCTTTTCTCCTTCCATCCCATCCCGGCCTCTCGACC
TTTTTCCAGTGTTTCTATCCAGCCGTCGTCGTGTCCTCCCTCCCTCCCTC
CCTCCCGCCCTCCTCCTCTTCAGAGCCGGGGAGGGAGGGAGGGAGGGAGG
AAGCGATGTGCGCCCTATGGTTCGACGACGACGAAGACGAGAGGGGTAAC
CCCAACGTGGTTGAGGTACGGAGGAAGGGAGGAAGGGAGGGAGGGCATGA
TTCCGCATGAATCCAGGTGCTCATCCACCCCTCCCTCCCTCCCTCCCTCC
CTCCCACGCTCCCTCCCTCCCAGGTGCCATTCAAGTACATCACAATGGTT
CCTGAGGAATAGGGCGGCGTCGATAGAGAGAGGGAGGGTAGGAGGG back to topCoding sequence (CDS) from alignment at scaffold_15:245852..247797+ >mRNA_6287 ID=mRNA_6287|Name=jgi.p|Nanoce1779_2|89338|organism=Nannochloropsis oceanica|type=CDS|length=6405bp|location=Sequence derived from alignment at scaffold_15:245852..247797+ (Nannochloropsis oceanica) ATGCCCCATCCCTCCTTCCCTCCGCTCCCTCCCTCCCTCACTCCCACACT CCAACTCCACAAGGCCTCCCTCCTCCAAGAGGAAGGCGGAGGACCCGATA ATTTTTTTGCCATGACCCGCACACTTTCTCGGCTCAAAGAACAAGCCGCA ATGAACACCCTTGCCTTCCAACGAGGCCGAGGCGACAGCGGCGGCAGCGG AGGAGTAAGAGGTGTTGAGGGCCTGGGACCGGATTCCGTGACATTAAAGC AGATGAGAGCAACATTGGTGAACACGGCAAGGTGCTGTGGAAGAATAGCG CACGAGGCAGAGGCATGTCTAGAGCTGCTAAAGCAGGAGAGAGGAGGAGG AGGGGGAAGAATGGAGAAAGGGATGGAGGAAGAGGAGATGGACGAGATGA TGATGTTTGCACAACAATCGTACGACGGCAGCTCGAGCCACCTTTTCCTC CCCGCCCTCCCCCCCTCCCTCCCTTCCCCTTCCTCCCTCCCTTCCCACCC TTCTTCGACTCCATCCCACCAGGGCCCCCGAGGGACATTGAGCACACACA CGTCCGGTGGCGCCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACC AGCGAAACCAGCAATACTGCTGTCATCCTTGCCAAGCAAGGTCGAAGGCT CGCGGCGATCGTCCACAAGGCCCGGCAAACACGGGAGGGCGGAAGGGAGG AAGGGGGGGAGGAACCCCGTCCCTCCTCCTCATTCTTCAAGCCGGTCAAA CTCCCACATCTGGATCGGGCGCCGGAAGAAGGTGATGAGGCCGCTGCGAA GGTCTCCCCTGACGCAGCTGCCTGGGCGCTAACCACCGTCTTGGCCTTCA ATATGGTCACGGACAAGGTGGAAGTTGTGGACTTGGACGATGTCCGGCGA CGCTCGTACCTCATCGAGAGGAAAGACGTGATGCTCCTCCCCCGTCCTCA TGCAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAGCGG AAGGGAAGAAACGGTCAGGCGGAGAGGCGGTGCCAAAGTACTACCCGAAG GAGTCGAGGGTGTTTGCCCTGTATCCTGGAACGACGTGTTTCTATCCAGC CGTCGTCGTGTCCTCCCTCCCTCCCTCCCTCCCGCCCTCCTCCTCTTCAG AGCCGGGGAGGGAGGGAGGGAGGGAGGAAGCGATGTGCGCCCTATGGTTC GACGACGACGAAGACGAGAGGGGTAACCCCAACGTGGTTGAGGTGCCATT CAAGTACATCACAATGGTTCCTGAGGAATAGATGCCCCATCCCTCCTTCC CTCCGCTCCCTCCCTCCCTCACTCCCACACTCCAACTCCACAAGGCCTCC CTCCTCCAAGAGGAAGGCGGAGGACCCGATAATTTTTTTGCCATGACCCG CACACTTTCTCGGCTCAAAGAACAAGCCGCAATGAACACCCTTGCCTTCC AACGAGGCCGAGGCGACAGCGGCGGCAGCGGAGGAGTAAGAGGTGTTGAG GGCCTGGGACCGGATTCCGTGACATTAAAGCAGATGAGAGCAACATTGGT GAACACGGCAAGGTGCTGTGGAAGAATAGCGCACGAGGCAGAGGCATGTC TAGAGCTGCTAAAGCAGGAGAGAGGAGGAGGAGGGGGAAGAATGGAGAAA GGGATGGAGGAAGAGGAGATGGACGAGATGATGATGTTTGCACAACAATC GTACGACGGCAGCTCGAGCCACCTTTTCCTCCCCGCCCTCCCCCCCTCCC TCCCTTCCCCTTCCTCCCTCCCTTCCCACCCTTCTTCGACTCCATCCCAC CAGGGCCCCCGAGGGACATTGAGCACACACACGTCCGGTGGCGCCAGCAC CAGCACCAGCACCAGCACCAGCACCAGCACCAGCGAAACCAGCAATACTG CTGTCATCCTTGCCAAGCAAGGTCGAAGGCTCGCGGCGATCGTCCACAAG GCCCGGCAAACACGGGAGGGCGGAAGGGAGGAAGGGGGGGAGGAACCCCG TCCCTCCTCCTCATTCTTCAAGCCGGTCAAACTCCCACATCTGGATCGGG CGCCGGAAGAAGGTGATGAGGCCGCTGCGAAGGTCTCCCCTGACGCAGCT GCCTGGGCGCTAACCACCGTCTTGGCCTTCAATATGGTCACGGACAAGGT GGAAGTTGTGGACTTGGACGATGTCCGGCGACGCTCGTACCTCATCGAGA GGAAAGACGTGATGCTCCTCCCCCGTCCTCATGCAGGAGGAGGAGAAGGA GGAGGAGGAGGAGGAGGAGGAGGGAAAGCGGAAGGGAAGAAACGGTCAGG CGGAGAGGCGGTGCCAAAGTACTACCCGAAGGAGTCGAGGGTGTTTGCCC TGTATCCTGGAACGACGTGTTTCTATCCAGCCGTCGTCGTGTCCTCCCTC CCTCCCTCCCTCCCGCCCTCCTCCTCTTCAGAGCCGGGGAGGGAGGGAGG GAGGGAGGAAGCGATGTGCGCCCTATGGTTCGACGACGACGAAGACGAGA GGGGTAACCCCAACGTGGTTGAGGTGCCATTCAAGTACATCACAATGGTT CCTGAGGAATAGATGCCCCATCCCTCCTTCCCTCCGCTCCCTCCCTCCCT CACTCCCACACTCCAACTCCACAAGGCCTCCCTCCTCCAAGAGGAAGGCG GAGGACCCGATAATTTTTTTGCCATGACCCGCACACTTTCTCGGCTCAAA GAACAAGCCGCAATGAACACCCTTGCCTTCCAACGAGGCCGAGGCGACAG CGGCGGCAGCGGAGGAGTAAGAGGTGTTGAGGGCCTGGGACCGGATTCCG TGACATTAAAGCAGATGAGAGCAACATTGGTGAACACGGCAAGGTGCTGT GGAAGAATAGCGCACGAGGCAGAGGCATGTCTAGAGCTGCTAAAGCAGGA GAGAGGAGGAGGAGGGGGAAGAATGGAGAAAGGGATGGAGGAAGAGGAGA TGGACGAGATGATGATGTTTGCACAACAATCGTACGACGGCAGCTCGAGC CACCTTTTCCTCCCCGCCCTCCCCCCCTCCCTCCCTTCCCCTTCCTCCCT CCCTTCCCACCCTTCTTCGACTCCATCCCACCAGGGCCCCCGAGGGACAT TGAGCACACACACGTCCGGTGGCGCCAGCACCAGCACCAGCACCAGCACC AGCACCAGCACCAGCGAAACCAGCAATACTGCTGTCATCCTTGCCAAGCA AGGTCGAAGGCTCGCGGCGATCGTCCACAAGGCCCGGCAAACACGGGAGG GCGGAAGGGAGGAAGGGGGGGAGGAACCCCGTCCCTCCTCCTCATTCTTC AAGCCGGTCAAACTCCCACATCTGGATCGGGCGCCGGAAGAAGGTGATGA GGCCGCTGCGAAGGTCTCCCCTGACGCAGCTGCCTGGGCGCTAACCACCG TCTTGGCCTTCAATATGGTCACGGACAAGGTGGAAGTTGTGGACTTGGAC GATGTCCGGCGACGCTCGTACCTCATCGAGAGGAAAGACGTGATGCTCCT CCCCCGTCCTCATGCAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAG GAGGGAAAGCGGAAGGGAAGAAACGGTCAGGCGGAGAGGCGGTGCCAAAG TACTACCCGAAGGAGTCGAGGGTGTTTGCCCTGTATCCTGGAACGACGTG TTTCTATCCAGCCGTCGTCGTGTCCTCCCTCCCTCCCTCCCTCCCGCCCT CCTCCTCTTCAGAGCCGGGGAGGGAGGGAGGGAGGGAGGAAGCGATGTGC GCCCTATGGTTCGACGACGACGAAGACGAGAGGGGTAACCCCAACGTGGT TGAGGTGCCATTCAAGTACATCACAATGGTTCCTGAGGAATAGATGCCCC ATCCCTCCTTCCCTCCGCTCCCTCCCTCCCTCACTCCCACACTCCAACTC CACAAGGCCTCCCTCCTCCAAGAGGAAGGCGGAGGACCCGATAATTTTTT TGCCATGACCCGCACACTTTCTCGGCTCAAAGAACAAGCCGCAATGAACA CCCTTGCCTTCCAACGAGGCCGAGGCGACAGCGGCGGCAGCGGAGGAGTA AGAGGTGTTGAGGGCCTGGGACCGGATTCCGTGACATTAAAGCAGATGAG AGCAACATTGGTGAACACGGCAAGGTGCTGTGGAAGAATAGCGCACGAGG CAGAGGCATGTCTAGAGCTGCTAAAGCAGGAGAGAGGAGGAGGAGGGGGA AGAATGGAGAAAGGGATGGAGGAAGAGGAGATGGACGAGATGATGATGTT TGCACAACAATCGTACGACGGCAGCTCGAGCCACCTTTTCCTCCCCGCCC TCCCCCCCTCCCTCCCTTCCCCTTCCTCCCTCCCTTCCCACCCTTCTTCG ACTCCATCCCACCAGGGCCCCCGAGGGACATTGAGCACACACACGTCCGG TGGCGCCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCGAAA CCAGCAATACTGCTGTCATCCTTGCCAAGCAAGGTCGAAGGCTCGCGGCG ATCGTCCACAAGGCCCGGCAAACACGGGAGGGCGGAAGGGAGGAAGGGGG GGAGGAACCCCGTCCCTCCTCCTCATTCTTCAAGCCGGTCAAACTCCCAC ATCTGGATCGGGCGCCGGAAGAAGGTGATGAGGCCGCTGCGAAGGTCTCC CCTGACGCAGCTGCCTGGGCGCTAACCACCGTCTTGGCCTTCAATATGGT CACGGACAAGGTGGAAGTTGTGGACTTGGACGATGTCCGGCGACGCTCGT ACCTCATCGAGAGGAAAGACGTGATGCTCCTCCCCCGTCCTCATGCAGGA GGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAGCGGAAGGGAA GAAACGGTCAGGCGGAGAGGCGGTGCCAAAGTACTACCCGAAGGAGTCGA GGGTGTTTGCCCTGTATCCTGGAACGACGTGTTTCTATCCAGCCGTCGTC GTGTCCTCCCTCCCTCCCTCCCTCCCGCCCTCCTCCTCTTCAGAGCCGGG GAGGGAGGGAGGGAGGGAGGAAGCGATGTGCGCCCTATGGTTCGACGACG ACGAAGACGAGAGGGGTAACCCCAACGTGGTTGAGGTGCCATTCAAGTAC ATCACAATGGTTCCTGAGGAATAGATGCCCCATCCCTCCTTCCCTCCGCT CCCTCCCTCCCTCACTCCCACACTCCAACTCCACAAGGCCTCCCTCCTCC AAGAGGAAGGCGGAGGACCCGATAATTTTTTTGCCATGACCCGCACACTT TCTCGGCTCAAAGAACAAGCCGCAATGAACACCCTTGCCTTCCAACGAGG CCGAGGCGACAGCGGCGGCAGCGGAGGAGTAAGAGGTGTTGAGGGCCTGG GACCGGATTCCGTGACATTAAAGCAGATGAGAGCAACATTGGTGAACACG GCAAGGTGCTGTGGAAGAATAGCGCACGAGGCAGAGGCATGTCTAGAGCT GCTAAAGCAGGAGAGAGGAGGAGGAGGGGGAAGAATGGAGAAAGGGATGG AGGAAGAGGAGATGGACGAGATGATGATGTTTGCACAACAATCGTACGAC GGCAGCTCGAGCCACCTTTTCCTCCCCGCCCTCCCCCCCTCCCTCCCTTC CCCTTCCTCCCTCCCTTCCCACCCTTCTTCGACTCCATCCCACCAGGGCC CCCGAGGGACATTGAGCACACACACGTCCGGTGGCGCCAGCACCAGCACC AGCACCAGCACCAGCACCAGCACCAGCGAAACCAGCAATACTGCTGTCAT CCTTGCCAAGCAAGGTCGAAGGCTCGCGGCGATCGTCCACAAGGCCCGGC AAACACGGGAGGGCGGAAGGGAGGAAGGGGGGGAGGAACCCCGTCCCTCC TCCTCATTCTTCAAGCCGGTCAAACTCCCACATCTGGATCGGGCGCCGGA AGAAGGTGATGAGGCCGCTGCGAAGGTCTCCCCTGACGCAGCTGCCTGGG CGCTAACCACCGTCTTGGCCTTCAATATGGTCACGGACAAGGTGGAAGTT GTGGACTTGGACGATGTCCGGCGACGCTCGTACCTCATCGAGAGGAAAGA CGTGATGCTCCTCCCCCGTCCTCATGCAGGAGGAGGAGAAGGAGGAGGAG GAGGAGGAGGAGGAGGGAAAGCGGAAGGGAAGAAACGGTCAGGCGGAGAG GCGGTGCCAAAGTACTACCCGAAGGAGTCGAGGGTGTTTGCCCTGTATCC TGGAACGACGTGTTTCTATCCAGCCGTCGTCGTGTCCTCCCTCCCTCCCT CCCTCCCGCCCTCCTCCTCTTCAGAGCCGGGGAGGGAGGGAGGGAGGGAG GAAGCGATGTGCGCCCTATGGTTCGACGACGACGAAGACGAGAGGGGTAA CCCCAACGTGGTTGAGGTGCCATTCAAGTACATCACAATGGTTCCTGAGG AATAG back to top
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