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Properties
| Property Name | Value |
|---|
| TranscriptId | 594542 |
| Track | FilteredModels2 |
| ProteinId | 594456 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:243452..244890 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6286 ID=mRNA_6286|Name=jgi.p|Nanoce1779_2|594456|organism=Nannochloropsis oceanica|type=mRNA|length=913bp
ACAGGGAAGGATGGTGCGACACAACAACGTTATCCCCAACCAGCACTTCC
ACAAGGACTGGCAGAACCGTGTCAAGACATGGTTTGACCAGCCCGCCAAG
AAGAAGGCCCGCCGCCTAGCACGCAAGGCTAAGGCGGCTGCCGTCGCCCC
GAGGCCCACTCAGCTCCTCCGCCCGGTGGTGCACCCTCCCACCCAACGCT
ACAACCACAAGACCCGCCTGGGCAAGGGTTTTTCCATGCAGGAGCTCAAA
GAGGCCGGCATCACAAAGAGCTACGCCAAGTCGGTGGGGATCGCGGTCGA
CCACCGCCGCACCAACCTCTCTGTGGAGTCCCTGCAAGCGAATGTGCAAC
GCCTGAAGGAGTACAAGTCCAAGCTCATCGTCTTTCCCATAGGCCGTGTG
AAAAAGCCCAAGGCCGGTGACAGCACCACGGCTGAGTGCCGTGCAGCGAT
CCAGACGACAGGGACCATCCAACCGTTGCCCACGGGCAAGAAGCCGGTGG
AGTTTGTGTCTGTCTCAGAGGAGTTGAAAAAGTTTCGTGCCTACACTCAC
TTGCGGGTAGTCGTTAACGAGGCCAAGCTCGCGGGCATCCGTCGGGGGAA
AGCTGCGGAGGGCGATAAGGAGTAAAAAATGGCTTCGAAGGGAAGTGGAG
GGAGGATTGGGAGAAAAGGATCTAGGGGGGAGGTTGAGGTGGCCGAGTGC
TTGGCGCGAGCTTGGGCCTGGAGCACGAGAACATTGCTGCTTGCTAGATA
GTACGGGAGAGCGAGTTTATGGGAAAAGAGCATCAAAGCAGCAACCATTT
TGAGGTCTCACAGGCGGGGAAGGGAGGGACAGTCCATTGGTCCTATCCTC
CACCGCTTGCCACCGACGTCCGCCAAAACCAAAAACAAACAAACGACGAA
ACGAAACGAAAAA back to topprotein sequence of jgi.p|Nanoce1779_2|594456 >mRNA_6286-protein ID=mRNA_6286-protein|Name=jgi.p|Nanoce1779_2|594456|organism=Nannochloropsis oceanica|type=polypeptide|length=205bp
MVRHNNVIPNQHFHKDWQNRVKTWFDQPAKKKARRLARKAKAAAVAPRPT
QLLRPVVHPPTQRYNHKTRLGKGFSMQELKEAGITKSYAKSVGIAVDHRR
TNLSVESLQANVQRLKEYKSKLIVFPIGRVKKPKAGDSTTAECRAAIQTT
GTIQPLPTGKKPVEFVSVSEELKKFRAYTHLRVVVNEAKLAGIRRGKAAE
GDKE* back to topmRNA from alignment at scaffold_15:243452..244890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6286 ID=mRNA_6286|Name=jgi.p|Nanoce1779_2|594456|organism=Nannochloropsis oceanica|type=mRNA|length=1439bp|location=Sequence derived from alignment at scaffold_15:243452..244890- (Nannochloropsis oceanica)
ACAGGGAAGGATGGTGCGACACAACAACGTTATCCCCAACCAGCACTTCC
ACAAGGACTGGCAGAACCGTGTCAAGACATGGTTTGACCAGGTACGTGTG
AATGCACCAGCGGCGGAGTCCCCTCTTCACATCTGCGTGTATGCACGGTC
GCATGGTGTGTGTAGTGGCGTAAAAGGCCTCACTTTTGATTTTGGTCAAG
CTTTTGGTCCTATCTGTAGGCCTTCGTGTTGGTGTGCCCGCGTTATCATG
TCACACCTTGTGTGTTGTTTCTTCCATCTATGTCTTTTCACCATCATCTC
TCCGTCCCATGTTCCTCCCCTTCCTTCCTCCCTCCCTCCCTCCCCCCTCC
CTCCACAGCCCGCCAAGAAGAAGGCCCGCCGCCTAGCACGCAAGGCTAAG
GCGGCTGCCGTCGCCCCGAGGCCCACTCAGCTCCTCCGCCCGGTGGTGCA
CCCTCCCACCCAACGCTACAACCACAAGACCCGCCTGGGCAAGGGTTTTT
CCATGCAGGTGCGGAGAGAAGGAAGGGTGGCCAAAGGCATGGAGAGAGTT
GAGGAGGAAGGAGGATGGGCAGTAGAGAGAATGGGAAATTTAGCAAACGC
GATGAAATGAGGGGAGAGGTGTGCTGTGCTGTTCTGTGTTGCCTGTACTG
GAAGGTCCCTTCTTTCCATGAATTTCAGTTCACGATGCATCCTGTGCGTA
GCCGACTCTCCGCCTTTTCCGATGTACCACTCACTCACCAATTGTTCCTG
AATCTACTGTAAAACAGGAGCTCAAAGAGGCCGGCATCACAAAGAGCTAC
GCCAAGTCGGTGGGGATCGCGGTCGACCACCGCCGCACCAACCTCTCTGT
GGAGTCCCTGCAAGCGAATGTGCAACGCCTGAAGGAGTACAAGTCCAAGC
TCATCGTCTTTCCCATAGGCCGTGTGAAAAAGCCCAAGGCCGGTGACAGC
ACCACGGCTGAGTGCCGTGCAGCGATCCAGACGACAGGGACCATCCAACC
GTTGCCCACGGGCAAGAAGCCGGTGGAGTTTGTGTCTGTCTCAGAGGAGT
TGAAAAAGTTTCGTGCCTACACTCACTTGCGGGTAGTCGTTAACGAGGCC
AAGCTCGCGGGCATCCGTCGGGGGAAAGCTGCGGAGGGCGATAAGGAGTA
AAAAATGGCTTCGAAGGGAAGTGGAGGGAGGATTGGGAGAAAAGGATCTA
GGGGGGAGGTTGAGGTGGCCGAGTGCTTGGCGCGAGCTTGGGCCTGGAGC
ACGAGAACATTGCTGCTTGCTAGATAGTACGGGAGAGCGAGTTTATGGGA
AAAGAGCATCAAAGCAGCAACCATTTTGAGGTCTCACAGGCGGGGAAGGG
AGGGACAGTCCATTGGTCCTATCCTCCACCGCTTGCCACCGACGTCCGCC
AAAACCAAAAACAAACAAACGACGAAACGAAACGAAAAA back to topCoding sequence (CDS) from alignment at scaffold_15:243452..244890- >mRNA_6286 ID=mRNA_6286|Name=jgi.p|Nanoce1779_2|594456|organism=Nannochloropsis oceanica|type=CDS|length=1845bp|location=Sequence derived from alignment at scaffold_15:243452..244890- (Nannochloropsis oceanica)
GAGCTCAAAGAGGCCGGCATCACAAAGAGCTACGCCAAGTCGGTGGGGAT
CGCGGTCGACCACCGCCGCACCAACCTCTCTGTGGAGTCCCTGCAAGCGA
ATGTGCAACGCCTGAAGGAGTACAAGTCCAAGCTCATCGTCTTTCCCATA
GGCCGTGTGAAAAAGCCCAAGGCCGGTGACAGCACCACGGCTGAGTGCCG
TGCAGCGATCCAGACGACAGGGACCATCCAACCGTTGCCCACGGGCAAGA
AGCCGGTGGAGTTTGTGTCTGTCTCAGAGGAGTTGAAAAAGTTTCGTGCC
TACACTCACTTGCGGGTAGTCGTTAACGAGGCCAAGCTCGCGGGCATCCG
TCGGGGGAAAGCTGCGGAGGGCGATAAGGAGTAACCCGCCAAGAAGAAGG
CCCGCCGCCTAGCACGCAAGGCTAAGGCGGCTGCCGTCGCCCCGAGGCCC
ACTCAGCTCCTCCGCCCGGTGGTGCACCCTCCCACCCAACGCTACAACCA
CAAGACCCGCCTGGGCAAGGGTTTTTCCATGCAGATGGTGCGACACAACA
ACGTTATCCCCAACCAGCACTTCCACAAGGACTGGCAGAACCGTGTCAAG
ACATGGTTTGACCAGGAGCTCAAAGAGGCCGGCATCACAAAGAGCTACGC
CAAGTCGGTGGGGATCGCGGTCGACCACCGCCGCACCAACCTCTCTGTGG
AGTCCCTGCAAGCGAATGTGCAACGCCTGAAGGAGTACAAGTCCAAGCTC
ATCGTCTTTCCCATAGGCCGTGTGAAAAAGCCCAAGGCCGGTGACAGCAC
CACGGCTGAGTGCCGTGCAGCGATCCAGACGACAGGGACCATCCAACCGT
TGCCCACGGGCAAGAAGCCGGTGGAGTTTGTGTCTGTCTCAGAGGAGTTG
AAAAAGTTTCGTGCCTACACTCACTTGCGGGTAGTCGTTAACGAGGCCAA
GCTCGCGGGCATCCGTCGGGGGAAAGCTGCGGAGGGCGATAAGGAGTAAC
CCGCCAAGAAGAAGGCCCGCCGCCTAGCACGCAAGGCTAAGGCGGCTGCC
GTCGCCCCGAGGCCCACTCAGCTCCTCCGCCCGGTGGTGCACCCTCCCAC
CCAACGCTACAACCACAAGACCCGCCTGGGCAAGGGTTTTTCCATGCAGA
TGGTGCGACACAACAACGTTATCCCCAACCAGCACTTCCACAAGGACTGG
CAGAACCGTGTCAAGACATGGTTTGACCAGGAGCTCAAAGAGGCCGGCAT
CACAAAGAGCTACGCCAAGTCGGTGGGGATCGCGGTCGACCACCGCCGCA
CCAACCTCTCTGTGGAGTCCCTGCAAGCGAATGTGCAACGCCTGAAGGAG
TACAAGTCCAAGCTCATCGTCTTTCCCATAGGCCGTGTGAAAAAGCCCAA
GGCCGGTGACAGCACCACGGCTGAGTGCCGTGCAGCGATCCAGACGACAG
GGACCATCCAACCGTTGCCCACGGGCAAGAAGCCGGTGGAGTTTGTGTCT
GTCTCAGAGGAGTTGAAAAAGTTTCGTGCCTACACTCACTTGCGGGTAGT
CGTTAACGAGGCCAAGCTCGCGGGCATCCGTCGGGGGAAAGCTGCGGAGG
GCGATAAGGAGTAACCCGCCAAGAAGAAGGCCCGCCGCCTAGCACGCAAG
GCTAAGGCGGCTGCCGTCGCCCCGAGGCCCACTCAGCTCCTCCGCCCGGT
GGTGCACCCTCCCACCCAACGCTACAACCACAAGACCCGCCTGGGCAAGG
GTTTTTCCATGCAGATGGTGCGACACAACAACGTTATCCCCAACCAGCAC
TTCCACAAGGACTGGCAGAACCGTGTCAAGACATGGTTTGACCAG back to top
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