jgi.p|Nanoce1779_2|594375, mRNA_6265 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|594375
Unique Name	mRNA_6265
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5311
Alignment location	scaffold_15:166687..172684 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	594461
Track	FilteredModels2
ProteinId	594375

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_15	supercontig	scaffold_15:166687..172684 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|594375	gene_6265	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|594375	mRNA_6265-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6265	CDS_6265	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_15:166687..172684-
coding sequence from alignment at scaffold_15:166687..172684-

mRNA sequence

>mRNA_6265 ID=mRNA_6265|Name=jgi.p|Nanoce1779_2|594375|organism=Nannochloropsis oceanica|type=mRNA|length=5311bp
ACAGACTTCTCTCCACCCACAACCACCACCCCGCAAAACATGAAGCTCTT
GTCCTTCGCTTGCCTCCTCGGCGCAGCCACTGCCTTCGTCCCCTCCATGC
CTACGACGACCCGCACCCGCGGCGCCGTCCGCATGATGGCGGAGAAATCC
AAGGCTGTCCCTTTCCTGCCCCGGCCCGCGGCGCTTGACGGCTCGGTTGT
TGGGGATGTTGGCTTTGACCCGGTGGGGTTCACCAGCTGGTTGCCCCTTT
CTTACTTGCAGGAGGCCGAGATCAAGCACTGCCGCATTGCCATGCTTGCC
ACCCTGGGCTGGATCGTCGCGGACTTCGTACATTTACCTGGCGCTGTCCA
CGAGGTCTCCTCTCTGGCCGCCCACGACGTGGCCGTCAAGTCCGGTGCCC
TCGCCCAGATTTTGATTTGGACCTCTATCGCCGAGGCTATCTCCGTCATT
GCCATTTCCCAGATGCTCGAGGGATCTGGCCGCCAGCCCGGTGACTTCAA
GTTCGATCCCCTCAACTTTGCCAAGGACGAAAAGAGCCTGAAGAAGATGC
AGCTCAGCGAGCTCAAGAACGGACGCCTGGCCATGCTCGCCTTCTCCGGC
ATTGTCACCCAGGCCGCCCTCACGGGCCATGCCTTCCCCTACATGTAAAC
GTCGACTCCCGCCCTGTCAACCGATTTATCCTTCTCGTCTCCTTCCTCTT
TACAAGCCTTGTCCTCATTTGTCCTCCTTTAAGCCCTCAGCGTGGTCACC
GCAGCAGCTGGTCCCGTCGTCAAGGGCACCCGTTCGTAATGTAGCTTTCC
CTATCTTAATCACCCCCTTTTGTCGTTCCCCTCCCGTGTGTAGGGTCTCT
CCCGGACGGCTTTAATTAAAAGCCTGTGGGTCATCTACACACTGATGTAC
CCTTCCGCCCCCCTCATATTTGTTCGTGCAGTGTGTTTGTCTGTGTCGTG
GGAGTTCTGTTCAGTTCTGTTCAAGAGCGAGTGTATGACATCATGTGGGT
GTGGGCAGCTTTTCAGGAGAAAGATAGAAGGAACAGAATCAAAAGAGACG
AAAAAGAAAAAAAGAACCACAACACATGCAGTGGCGGAGTGGACTGGAAG
AAGGCACATGAAACTAGAGGAAAGCCAATGAAGAAGTACCCTGGTAGATC
TCCTTTTCTCAACTTCCATCAAAGGGCATACACGTCTCACTCTATCTTTT
GCTTTACTAATTTTCCTCATGCTGAGAAGGGGACTCCTTAAGGAAGGGAG
GGGTGGGAGTCATGTCGAAGGGACGAGCTGTAACGGCTGGCCCAACGTCT
GCTTAACGGAACTTAACGCCATTGCTCGCTTGGCCTCTCTTGTTTTTGGA
GGCATGTCTGCCACACAGAAGCACCCCTTTATGGAGGACACCCTCAACAA
CACGTATTCCTAAATTGCTGGCTTGACCTCTTGTCACCCCTCCTAATCGC
AATCATCGCTCTTTCACTGACCGCCTTTCACAAATCAGGACTTACTATAT
CAATCTTTCTTCTCACTGCGCTCCCCCCACCTGTACATGGTAATACACAA
CACATAAAACACCAAGCAAGCAATCGCCATGTTTAAGAACGATCGCCCGC
TCTTCCGGAAGAAGACTTCGTCCGGTGCTCGCAAAATGGACGACAGTGCC
TCTCCAGTCCCGTCGGCCTCTGCGGCAGTCGCGGTTTCCACGACGGCGAA
GGTGAAAGAGAACACGGATATCTCTGCATCTCCCCCTCCCCCTCCTACCA
AGCCTCCTGTAGTCATTACCAAAGCGGCTCCGACGGATAAGGGGGCGGGG
GCAGCGGTTGACTCTACCAAGCGCCCGAAGAAGAAGAAGATGGAATCTCT
CCAGGCCTTGCGGTACATCACAGCGGTGCAAATGGTGGGCTTCCATTACT
TCCAAAACACTCCCTATCCCCTCTTCAATCGTGCTAATGCCTGGGGGAAT
GCCCCTTTCACCTTTATTCTTATGCTCTCTGGCTTTGTGATGGCTTTTGG
GTACGGCCGCACGGACAAGAAGATCGACGTGACGGAGTTTTTGATCAAGC
GATGGGCTAACCTTTACCCGCTTTACCTTTTCACGGTCGTTGCGGGCTTC
TTGCTAATCTCCTCGCAGAGTCCACAGCCTCTTGCACTGCTTCTTATCTT
GTTGGCCGGCGCAAGTGGCTTTATTCCTTCGGCCTTCATCAATGCCATCA
ACACGCCAGGCTGGACCATTGGCTCCCTATTTATCCTCTACGCTATCTTC
CCCTTTGCCGTGCGCATGCTCAAGGCCTGCTCACCCCGCATGCGTCTCTA
TTTCTGCATGCCTCTGTTATTTGCGTGTTCCATAGCGAAGCCCGTGGCGG
ACTTGTCGGTAAATTTGGGCGTGATCACCGGAATGGCCCGCATTGCCGCC
CTGGCTTCCATTCCAGACTTCCTGCAAGGCGTGAACCTCGGGCTGCTGTT
CCTCGAGCATGATTGGACACGCCACCCGAAGTTGTTGCAGAAATTTGGCA
TGTCTGCCGCTCTGGCCGTTGCGTGTTGTCTGTTTGTCTTTGTCGATTTG
ATGGATGTCCCTATTTTCTTCCAGCTCTGGCGTGCCTATGGCATGCTGCA
GTTCATCTGGATTCCCGTGATCTGGTATGCAGCCCACGGGAAGGACTTCC
TATCTATTATCTTTGAGTTGCCATTCATCTCCTACCTCGGCAACACCTCT
TTTGGCGTCTACATTCTTCAACAGCTCCTGATCGACTACAAGTGGACGAA
CGATCCCTTCCTCCTCGAAAACAAGTACCCGGAGATACTGAATTTCATCG
TCATCCTTACCGTCCTCGGTGCCATTGGATATCACTGTCTCCAGCTTCCC
TACCAACCCTATATTACGAAGGAAGGCAACGCCCTCCTCAAAACCTACCG
CGCCTCCCGCCCTGCCTCCATTATCAACAAATCCCTCTACATCATTTTCG
AATCACGGATCGGGCGCGCCCTGACGGGCTTGGCCTTCTTCGCTGGATAC
ATCCTTTATACCAACTACCAGCCATGCTTGCCTGTGGATTTTTCGATCAA
GCTTGGGGACACCCGGTGGTTCACGCGCAATGATTGGAATTGGCTGATCA
ATTGGTACATGACCCCCTGCACTCCGCGGCGGTTTATCCCCGCAGTAGTC
AGCTCCCGCATTGAATTCATCGCCATCATACTGTCCGGCCTTGGGATTCT
GGGCTTTGTTGTCAGCTTGATAAAGAGGGCAATGAGCCACAGCGCGAGCG
ATAGCCACCGATTGGATTTGAGCGAGGAAGACAGCGCGGTGATCCTGAGA
ATCGTCTGTAGGTCTAGTACCCCACCCAAGGGCATCTCACAGACCCTCGA
CGGAGTGGTCAAAATTGCGGCTGCCTTGAAATTGGAGCACCCCACCAAAA
CAATCGCCGTCGAAGTGGTGGGTGCCACCACATCCTACACGTACGACATT
CCTTCCTCCCTCCCTCCCTCTTCGTTGGACATCACACTCCTCAACATGCC
TTTCGATGCAGCACGCACCCGCAGTCAGATCCAGCCTAAGGACTTGGTCA
TCTCCCTCCCTGTCGGGGCTCGCCTTGGTTCCTCCTCCGCCCTCCTCCGC
CTCCTCGCCATGGCCTCGAGCAAGACCGTCGTGGCCTTCCCCCTGGCAAT
CGACGGCTCCGACGACGCCCTCCCGTCTCTAGGGACGCTCGCGGAGCTCA
ACTTCCAAAGCCCCTCCTCCCGCCGCCCCTGCCTCCTGGTGGGTAGCGCT
AGCTTGCAGCAGAAGCTGAGTACCAACACCACCTTTGCCGCGCTGGAGCA
TGGAAGTCTCCTCTCGGATTACCTGTCCGTGGCGCCGGCGGCCTCGCCCT
CCCTCTCTCCCTCCCTTGGCGTCTACCACACCACGGCCTCCCTGGATTCC
TACCTGGGAAGGCGCCGCGCGTTTGTGAAACGGGCTGTAGCTGGATGGGT
GTGGGAAAACAAGATGATGGAAGCTGTGCGCTTTTCTTGCGAGGGGGCGC
TCCACCTAGCGTTCGTGCTGGCCCTGGCGGTGGTGATTGGCACCCCAGTC
CACACGTATTACGCCCCCGGAAATTACTGCAACTTCTACTGGTCCGATCA
GTGCACGAACGGGGTTGCTGTCGGTCTCTCTCTCTCCCGTGCGGCGATGA
CATTTATCTGTGCCTTTTACACTGCCGGTTACTTCTACCGTTTCCTCTGC
GCTTTCCGCATGTCTGACGGAGGCATCGTCCGCATGACGATTCTGACGTT
CCTCCTCATCTTTTTCCTACCCCTCACCGCGGCAGTGGACGCTTGGTATT
GCTTCGTAGCTGCCATGATGATGCTCAGTCCTGCCACTAATGGGAGTGAG
GACCATGCATCGATTTCAGGAAGCGAAAAAATGCAACGGCGAATCGAGGC
GCCATTTGCAAGCCCCTCGGCGCATGCGTAACGTACAAGGAGGAAGGGAG
GGAGGGAGGGAGGGAATCAGGATATAAATAAATACATGAGGAGGAGGATG
TATTCACCAACGTGGTAGTTTACGAGCAGTAGAAATCTTCTAAATTATTA
CTTTAATGGAAAGAAATGACATCGGTCAACTTTTTTGGGGGGATTAGGAC
AACTAGCCGTGTAGAAGCCTACCTTCGAGTGGAAGAGTGGCTGAGAAAGG
TGGGCTCGAGGTGCTTTAGGACAGGACATAGATGGACGTCGGTTACACCA
CGAAGAGGAAGAGATGAGAGAATGAGAGAAATAGTCGTGTCGATATGAGT
TAAGAGTGAAGCGATGGATGGGAGAGGAGGAATGGAAAGGATGCGATTCA
AATTGAGGGAGTTGTGGGGAATGAGAACATTACAAGCAATGTAGAACTCA
TTTCACTTTATTGATTTTCTCGCTTGTACTCTTGTACCTTTGAAAGAATC
TTTGGAAGAGGAGTGGAAGTGAGCGGGAATGAGAAGAAAAAGAGTGTGTG
TGTGTGTGTGTGCGTGAGTGTGTGGATGTGCATGAATGTGAAAGGAGAAA
TGAGAAGGGCGAACATGCGCAGGACGACTTAAAAATTAAATACAGAGGTA
AAATACACGAACCAAAAAAACACGCAAAGAGGAGGGACCATGATTAAGGG
AGGAGGAAAAGAAACATCTGAAACCTTCAAGGAAAGAGAGCTAAGAGTTA
CTATTGTGGAAAATGGAAGAGGGAAGTAGACGATGATGAAGAAGAAGGGA
AAGAGAGAATAAGACAGAGAGAAAAAGAAGAGGAGATGAAGATAGATGAA
GAGAGAGAGAGGGCGCGGAGGCGAAAGTAAACAAAGAAACAAAGTAAAGG
GGCCTCGAAAA

protein sequence of jgi.p|Nanoce1779_2|594375

>mRNA_6265-protein ID=mRNA_6265-protein|Name=jgi.p|Nanoce1779_2|594375|organism=Nannochloropsis oceanica|type=polypeptide|length=203bp
MKLLSFACLLGAATAFVPSMPTTTRTRGAVRMMAEKSKAVPFLPRPAALD
GSVVGDVGFDPVGFTSWLPLSYLQEAEIKHCRIAMLATLGWIVADFVHLP
GAVHEVSSLAAHDVAVKSGALAQILIWTSIAEAISVIAISQMLEGSGRQP
GDFKFDPLNFAKDEKSLKKMQLSELKNGRLAMLAFSGIVTQAALTGHAFP
YM*

mRNA from alignment at scaffold_15:166687..172684-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6265 ID=mRNA_6265|Name=jgi.p|Nanoce1779_2|594375|organism=Nannochloropsis oceanica|type=mRNA|length=5998bp|location=Sequence derived from alignment at scaffold_15:166687..172684- (Nannochloropsis oceanica)
ACAGACTTCTCTCCACCCACAACCACCACCCCGCAAAACATGAAGCTCTT
GTCCTTCGCTTGCCTCCTCGGCGCAGCCACTGCCTTCGTCCCCTCCATGC
CTACGACGACCCGCACCCGCGGCGCCGTCCGCATGATGGCGGAGAAATCC
AAGGCTGTCCCTTTCCTGCCCCGGCCCGCGGCGCTTGACGGCTCGGTTGT
TGGGGATGTTGGCTTTGACCCGGTGGGGTTCACCAGCTGGTTGCCCCTTT
CTTACTTGCAGGAGGCCGAGATCAAGCACTGCCGCATTGCCATGCTTGCC
ACCCTGGGCTGGATCGTCGCGGACTTCGTACATTTACCTGGTACGTTTTC
TTTTGTATATCTAGAATGGTGTGTGTCGTGACACGGGGAGGCTAGCTATC
GTGATGAGACGATTTTTGACGTCGCCCTCCTATCCAACCAACACTTACCC
CTCCCCTCCCTCCCTCTTTCCGATCCTCCCTTCCATTCCAATCACATGCA
GGCGCTGTCCACGAGGTCTCCTCTCTGGCCGCCCACGACGTGGCCGTCAA
GTCCGGTGCCCTCGCCCAGATTTTGATTTGGACCTCTATCGCCGAGGCTA
TCTCCGTCATTGCCATTTCCCAGATGCTCGAGGGATCTGGCCGCCAGGTA
CGGTCCCCTTTTCTATCACATGTCGTCTCCTTTCCTTTGTCGTCCTGTCG
TCGGCATTTGTGTGATCACCTGTGAGTCCCTTTTTTTCCTTTTCTCACTC
TAGTCTCGACGCCGTTTACCCACCACTCACTCCTCCTTCCCTCCCTCCCT
CCCCTTTTCCCCACACTGAACATCTCAGCCCGGTGACTTCAAGTTCGATC
CCCTCAACTTTGCCAAGGACGAAAAGAGCCTGAAGAAGATGCAGCTCAGC
GAGCTCAAGAACGGACGCCTGGCCATGGTACGGTCCCGTAAGGGAGCTAT
TTCCCCCTTTTTTCTGTTTTGTGATTGCGCTGCCTGGCTGCTTGCTTCAC
ATGAGTATGAAGAAATCCATTAGTATTCAGATTTCTACAGTTTGTACGGT
AGACTTACATCTTCTCCTCTCCCCCCACCCCTCTTCCCTCTTTATCAGCT
CGCCTTCTCCGGCATTGTCACCCAGGCCGCCCTCACGGGCCATGCCTTCC
CCTACATGTAAACGTCGACTCCCGCCCTGTCAACCGATTTATCCTTCTCG
TCTCCTTCCTCTTTACAAGCCTTGTCCTCATTTGTCCTCCTTTAAGCCCT
CAGCGTGGTCACCGCAGCAGCTGGTCCCGTCGTCAAGGGCACCCGTTCGT
AATGTAGCTTTCCCTATCTTAATCACCCCCTTTTGTCGTTCCCCTCCCGT
GTGTAGGGTCTCTCCCGGACGGCTTTAATTAAAAGCCTGTGGGTCATCTA
CACACTGATGTACCCTTCCGCCCCCCTCATATTTGTTCGTGCAGTGTGTT
TGTCTGTGTCGTGGGAGTTCTGTTCAGTTCTGTTCAAGAGCGAGTGTATG
ACATCATGTGGGTGTGGGCAGCTTTTCAGGAGAAAGATAGAAGGAACAGA
ATCAAAAGAGACGAAAAAGAAAAAAAGAACCACAACACATGCAGTGGCGG
AGTGGACTGGAAGAAGGCACATGAAACTAGAGGAAAGCCAATGAAGAAGT
ACCCTGGTAGATCTCCTTTTCTCAACTTCCATCAAAGGGCATACACGTCT
CACTCTATCTTTTGCTTTACTAATTTTCCTCATGCTGAGAAGGGGACTCC
TTAAGGAAGGGAGGGGTGGGAGTCATGTCGAAGGGACGAGCTGTAACGGC
TGGCCCAACGTCTGCTTAACGGAACTTAACGCCATTGCTCGCTTGGCCTC
TCTTGTTTTTGGAGGCATGTCTGCCACACAGAAGCACCCCTTTATGGAGG
ACACCCTCAACAACACGTATTCCTAAATTGCTGGCTTGACCTCTTGTCAC
CCCTCCTAATCGCAATCATCGCTCTTTCACTGACCGCCTTTCACAAATCA
GGACTTACTATATCAATCTTTCTTCTCACTGCGCTCCCCCCACCTGTACA
TGGTAATACACAACACATAAAACACCAAGCAAGCAATCGCCATGTTTAAG
AACGATCGCCCGCTCTTCCGGAAGAAGACTTCGTCCGGTGCTCGCAAAAT
GGACGACAGTGCCTCTCCAGTCCCGTCGGCCTCTGCGGCAGTCGCGGTTT
CCACGACGGCGAAGGTGAAAGAGAACACGGATATCTCTGCATCTCCCCCT
CCCCCTCCTACCAAGCCTCCTGTAGTCATTACCAAAGCGGCTCCGACGGA
TAAGGGGGCGGGGGCAGCGGTTGACTCTACCAAGCGCCCGAAGAAGAAGA
AGATGGAATCTCTCCAGGCCTTGCGGTACATCACAGCGGTGCAAATGGTG
GGCTTCCATTACTTCCAAAACACTCCCTATCCCCTCTTCAATCGTGCTAA
TGCCTGGGGGAATGCCCCTTTCACCTTTATTCTTATGCTCTCTGGCTTTG
TGATGGCTTTTGGGTACGGCCGCACGGACAAGAAGATCGACGTGACGGAG
TTTTTGATCAAGCGATGGGCTAACCTTTACCCGCTTTACCTTTTCACGGT
CGTTGCGGGCTTCTTGCTAATCTCCTCGCAGAGTCCACAGCCTCTTGCAC
TGCTTCTTATCTTGTTGGCCGGCGCAAGTGGCTTTATTCCTTCGGCCTTC
ATCAATGCCATCAACACGCCAGGCTGGACCATTGGCTCCCTATTTATCCT
CTACGCTATCTTCCCCTTTGCCGTGCGCATGCTCAAGGCCTGCTCACCCC
GCATGCGTCTCTATTTCTGCATGCCTCTGTTATTTGCGTGTTCCATAGCG
AAGCCCGTGGCGGACTTGTCGGTAAATTTGGGCGTGATCACCGGAATGGC
CCGCATTGCCGCCCTGGCTTCCATTCCAGACTTCCTGCAAGGCGTGAACC
TCGGGCTGCTGTTCCTCGAGCATGATTGGACACGCCACCCGAAGTTGTTG
CAGAAATTTGGCATGTCTGCCGCTCTGGCCGTTGCGTGTTGTCTGTTTGT
CTTTGTCGATTTGATGGATGTCCCTATTTTCTTCCAGCTCTGGCGTGCCT
ATGGCATGCTGCAGTTCATCTGGATTCCCGTGATCTGGTATGCAGCCCAC
GGGAAGGACTTCCTATCTATTATCTTTGAGTTGCCATTCATCTCCTACCT
CGGCAACACCTCTTTTGGCGTCTACATTCTTCAACAGCTCCTGATCGACT
ACAAGTGGACGAACGATCCCTTCCTCCTCGAAAACAAGTACCCGGAGATA
CTGAATTTCATCGTCATCCTTACCGTCCTCGGTGCCATTGGATATCACTG
TCTCCAGCTTCCCTACCAACCCTATATTACGAAGGAAGGCAACGCCCTCC
TCAAAACCTACCGCGCCTCCCGCCCTGCCTCCATTATCAACAAATCCCTC
TACATCATTTTCGAATCACGGATCGGGCGCGCCCTGACGGGCTTGGCCTT
CTTCGCTGGATACATCCTTTATACCAACTACCAGCCATGCTTGCCTGTGG
ATTTTTCGATCAAGCTTGGGGACACCCGGTGGTTCACGCGCAATGATTGG
AATTGGCTGATCAATTGGTACATGACCCCCTGCACTCCGCGGCGGTTTAT
CCCCGCAGTAGTCAGCTCCCGCATTGAATTCATCGCCATCATACTGTCCG
GCCTTGGGATTCTGGGCTTTGTTGTCAGCTTGATAAAGAGGGCAATGAGC
CACAGCGCGAGCGATAGCCACCGATTGGATTTGAGCGAGGAAGACAGCGC
GGTGATCCTGAGAATCGTCTGTAGGTCTAGTACCCCACCCAAGGGCATCT
CACAGACCCTCGACGGAGTGGTCAAAATTGCGGCTGCCTTGAAATTGGAG
CACCCCACCAAAACAATCGCCGTCGAAGTGGTGGGTGCCACCACATCCTA
CACGTACGACATTCCTTCCTCCCTCCCTCCCTCTTCGTTGGACATCACAC
TCCTCAACATGCCTTTCGATGCAGCACGCACCCGCAGTCAGATCCAGCCT
AAGGACTTGGTCATCTCCCTCCCTGTCGGGGCTCGCCTTGGTTCCTCCTC
CGCCCTCCTCCGCCTCCTCGCCATGGCCTCGAGCAAGACCGTCGTGGCCT
TCCCCCTGGCAATCGACGGCTCCGACGACGCCCTCCCGTCTCTAGGGACG
CTCGCGGAGCTCAACTTCCAAAGCCCCTCCTCCCGCCGCCCCTGCCTCCT
GGTGGGTAGCGCTAGCTTGCAGCAGAAGCTGAGTACCAACACCACCTTTG
CCGCGCTGGAGCATGGAAGTCTCCTCTCGGATTACCTGTCCGTGGCGCCG
GCGGCCTCGCCCTCCCTCTCTCCCTCCCTTGGCGTCTACCACACCACGGC
CTCCCTGGATTCCTACCTGGGAAGGCGCCGCGCGTTTGTGAAACGGGCTG
TAGCTGGATGGGTGTGGGAAAACAAGATGATGGAAGCTGTGCGCTTTTCT
TGCGAGGGGGCGCTCCACCTAGCGTTCGTGCTGGCCCTGGCGGTGGTGAT
TGGCACCCCAGTCCACACGTATTACGCCCCCGGAAATTACTGCAACTTCT
ACTGGTATGTTTTCGATGATCCCTCCCTCTCTCCCCACCTTCCCCCCCCC
CCCCCCCTATACTTTTGCTGTTTGTGTGTGTGTGTGCTTGTGGTAGCTAT
AGCTCTGGTACTTGTCTTGATTTAACACAATCCTCCCTCCCTCCCACCTT
CCCTCCCTCCCTCCCTCCCTCCCTCCAGGTCCGATCAGTGCACGAACGGG
GTTGCTGTCGGTCTCTCTCTCTCCCGTGCGGCGATGACATTTATCTGTGC
CTTTTACACTGCCGGTTACTTCTACCGTTTCCTCTGCGCTTTCCGCATGT
CTGACGGAGGCATCGTCCGCATGACGATTCTGACGTTCCTCCTCATCTTT
TTCCTACCCCTCACCGCGGCAGTGGACGCTTGGTATTGCTTCGTAGCTGC
CATGATGATGCTCAGTCCTGCCACTAATGGGAGTGAGGACCATGCATCGA
TTTCAGGAAGCGAAAAAATGCAACGGCGAATCGAGGCGCCATTTGCAAGC
CCCTCGGCGCATGCGTAACGTACAAGGAGGAAGGGAGGGAGGGAGGGAGG
GAATCAGGATATAAATAAATACATGAGGAGGAGGATGTATTCACCAACGT
GGTAGTTTACGAGCAGTAGAAATCTTCTAAATTATTACTTTAATGGAAAG
AAATGACATCGGTCAACTTTTTTGGGGGGATTAGGACAACTAGCCGTGTA
GAAGCCTACCTTCGAGTGGAAGAGTGGCTGAGAAAGGTGGGCTCGAGGTG
CTTTAGGACAGGACATAGATGGACGTCGGTTACACCACGAAGAGGAAGAG
ATGAGAGAATGAGAGAAATAGTCGTGTCGATATGAGTTAAGAGTGAAGCG
ATGGATGGGAGAGGAGGAATGGAAAGGATGCGATTCAAATTGAGGGAGTT
GTGGGGAATGAGAACATTACAAGCAATGTAGAACTCATTTCACTTTATTG
ATTTTCTCGCTTGTACTCTTGTACCTTTGAAAGAATCTTTGGAAGAGGAG
TGGAAGTGAGCGGGAATGAGAAGAAAAAGAGTGTGTGTGTGTGTGTGTGC
GTGAGTGTGTGGATGTGCATGAATGTGAAAGGAGAAATGAGAAGGGCGAA
CATGCGCAGGACGACTTAAAAATTAAATACAGAGGTAAAATACACGAACC
AAAAAAACACGCAAAGAGGAGGGACCATGATTAAGGGAGGAGGAAAAGAA
ACATCTGAAACCTTCAAGGAAAGAGAGCTAAGAGTTACTATTGTGGAAAA
TGGAAGAGGGAAGTAGACGATGATGAAGAAGAAGGGAAAGAGAGAATAAG
ACAGAGAGAAAAAGAAGAGGAGATGAAGATAGATGAAGAGAGAGAGAGGG
CGCGGAGGCGAAAGTAAACAAAGAAACAAAGTAAAGGGGCCTCGAAAA

Coding sequence (CDS) from alignment at scaffold_15:166687..172684-

>mRNA_6265 ID=mRNA_6265|Name=jgi.p|Nanoce1779_2|594375|organism=Nannochloropsis oceanica|type=CDS|length=2436bp|location=Sequence derived from alignment at scaffold_15:166687..172684- (Nannochloropsis oceanica)
CTCGCCTTCTCCGGCATTGTCACCCAGGCCGCCCTCACGGGCCATGCCTT
CCCCTACATGTAACCCGGTGACTTCAAGTTCGATCCCCTCAACTTTGCCA
AGGACGAAAAGAGCCTGAAGAAGATGCAGCTCAGCGAGCTCAAGAACGGA
CGCCTGGCCATGGCGCTGTCCACGAGGTCTCCTCTCTGGCCGCCCACGAC
GTGGCCGTCAAGTCCGGTGCCCTCGCCCAGATTTTGATTTGGACCTCTAT
CGCCGAGGCTATCTCCGTCATTGCCATTTCCCAGATGCTCGAGGGATCTG
GCCGCCAGATGAAGCTCTTGTCCTTCGCTTGCCTCCTCGGCGCAGCCACT
GCCTTCGTCCCCTCCATGCCTACGACGACCCGCACCCGCGGCGCCGTCCG
CATGATGGCGGAGAAATCCAAGGCTGTCCCTTTCCTGCCCCGGCCCGCGG
CGCTTGACGGCTCGGTTGTTGGGGATGTTGGCTTTGACCCGGTGGGGTTC
ACCAGCTGGTTGCCCCTTTCTTACTTGCAGGAGGCCGAGATCAAGCACTG
CCGCATTGCCATGCTTGCCACCCTGGGCTGGATCGTCGCGGACTTCGTAC
ATTTACCTGCTCGCCTTCTCCGGCATTGTCACCCAGGCCGCCCTCACGGG
CCATGCCTTCCCCTACATGTAACCCGGTGACTTCAAGTTCGATCCCCTCA
ACTTTGCCAAGGACGAAAAGAGCCTGAAGAAGATGCAGCTCAGCGAGCTC
AAGAACGGACGCCTGGCCATGGCGCTGTCCACGAGGTCTCCTCTCTGGCC
GCCCACGACGTGGCCGTCAAGTCCGGTGCCCTCGCCCAGATTTTGATTTG
GACCTCTATCGCCGAGGCTATCTCCGTCATTGCCATTTCCCAGATGCTCG
AGGGATCTGGCCGCCAGATGAAGCTCTTGTCCTTCGCTTGCCTCCTCGGC
GCAGCCACTGCCTTCGTCCCCTCCATGCCTACGACGACCCGCACCCGCGG
CGCCGTCCGCATGATGGCGGAGAAATCCAAGGCTGTCCCTTTCCTGCCCC
GGCCCGCGGCGCTTGACGGCTCGGTTGTTGGGGATGTTGGCTTTGACCCG
GTGGGGTTCACCAGCTGGTTGCCCCTTTCTTACTTGCAGGAGGCCGAGAT
CAAGCACTGCCGCATTGCCATGCTTGCCACCCTGGGCTGGATCGTCGCGG
ACTTCGTACATTTACCTGCTCGCCTTCTCCGGCATTGTCACCCAGGCCGC
CCTCACGGGCCATGCCTTCCCCTACATGTAACCCGGTGACTTCAAGTTCG
ATCCCCTCAACTTTGCCAAGGACGAAAAGAGCCTGAAGAAGATGCAGCTC
AGCGAGCTCAAGAACGGACGCCTGGCCATGGCGCTGTCCACGAGGTCTCC
TCTCTGGCCGCCCACGACGTGGCCGTCAAGTCCGGTGCCCTCGCCCAGAT
TTTGATTTGGACCTCTATCGCCGAGGCTATCTCCGTCATTGCCATTTCCC
AGATGCTCGAGGGATCTGGCCGCCAGATGAAGCTCTTGTCCTTCGCTTGC
CTCCTCGGCGCAGCCACTGCCTTCGTCCCCTCCATGCCTACGACGACCCG
CACCCGCGGCGCCGTCCGCATGATGGCGGAGAAATCCAAGGCTGTCCCTT
TCCTGCCCCGGCCCGCGGCGCTTGACGGCTCGGTTGTTGGGGATGTTGGC
TTTGACCCGGTGGGGTTCACCAGCTGGTTGCCCCTTTCTTACTTGCAGGA
GGCCGAGATCAAGCACTGCCGCATTGCCATGCTTGCCACCCTGGGCTGGA
TCGTCGCGGACTTCGTACATTTACCTGCTCGCCTTCTCCGGCATTGTCAC
CCAGGCCGCCCTCACGGGCCATGCCTTCCCCTACATGTAACCCGGTGACT
TCAAGTTCGATCCCCTCAACTTTGCCAAGGACGAAAAGAGCCTGAAGAAG
ATGCAGCTCAGCGAGCTCAAGAACGGACGCCTGGCCATGGCGCTGTCCAC
GAGGTCTCCTCTCTGGCCGCCCACGACGTGGCCGTCAAGTCCGGTGCCCT
CGCCCAGATTTTGATTTGGACCTCTATCGCCGAGGCTATCTCCGTCATTG
CCATTTCCCAGATGCTCGAGGGATCTGGCCGCCAGATGAAGCTCTTGTCC
TTCGCTTGCCTCCTCGGCGCAGCCACTGCCTTCGTCCCCTCCATGCCTAC
GACGACCCGCACCCGCGGCGCCGTCCGCATGATGGCGGAGAAATCCAAGG
CTGTCCCTTTCCTGCCCCGGCCCGCGGCGCTTGACGGCTCGGTTGTTGGG
GATGTTGGCTTTGACCCGGTGGGGTTCACCAGCTGGTTGCCCCTTTCTTA
CTTGCAGGAGGCCGAGATCAAGCACTGCCGCATTGCCATGCTTGCCACCC
TGGGCTGGATCGTCGCGGACTTCGTACATTTACCTG

Synonyms

Publications