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Properties
| Property Name | Value |
|---|
| TranscriptId | 631495 |
| Track | FilteredModels2 |
| ProteinId | 631409 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:76406..79038 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6233 ID=mRNA_6233|Name=jgi.p|Nanoce1779_2|631409|organism=Nannochloropsis oceanica|type=mRNA|length=2342bp
AACAAGTTTATTTGCTACTACTTCATGATGCCTGCCAATGCAGCTTTCTC
CACCTTCCTTGATGTACATACTTACTGGCCCTGATCATTCAGATCTTCAA
CAGAAATCAATTCTCTGTAGAGCTTGATTCACCGGTATGCTTGCGGTAAT
ACAGATAATCACTACTTGCGCCTTACTCCGTTCACATATAAGACGTGCCT
CTTCTTCACCAATTACAGACCAGCACTGATTTGGAGTTTTCTTCGTCATC
CGCAACCTCCCGCACATGGCCTTACTTCCGTCACAAGCTGTGATATGTTC
AAGCTATAGCGATGAACATCACCATGAATGTCCTAAGTAGTAGGGGAAAA
TGGCTTTAGCTCGATCCATTTTTCCGCTTCCCCCCGCGCCACCTGCTCGC
AAAAATCATACTCCATCCCTGTTTGTTCTTTTCATTTTTTGTGGATTTTA
ATCACCATTACGTACTTTGCCACGAGCATGATGGTATCTACCTCTATCAT
ATGAAGAGCATCAAAATAAGCCACGGATGGTTTCCGGGTAATCGACAATT
TCCTTGATGAAGCACTTTCGCGTAGTGTTCATGCTGCACACTACTTTTCC
CTCGTTGTAGTGTATTTGAGCTTCGAGTGATGGATGCTTGTCAAAATTAC
TTCGCCCCCCTCAACAGATGCCATGGACTCGACCGGAACCAGAGTGTCCA
TGGGGCTGACACCAAGGATTCGAGCAGCGGAATCGACTGATGCCACGAGG
GAGTCCGGCACAATTGATGCTAAGCCATTCAGGATCACAATTGTGTTTTC
GACGCAAATTCTAATTATCTGTGATAGGCATTGATTTTCCGATGGCTTTC
CAGCGCAGCGCTACTTGATACTTTGGTTCTCCTCGATTATTTTCTCTGTC
GATCCCCTGATTTCGAACACAGGTCCTGAACTTGGATGAGTTCAGCGATT
CCCTCGGAGTCACTCCAGGCCTTCCCTGAGGGCATGCGGCAGGGTACCCG
GCTTTTGCCTCACCGCCTGCCCTTATCGTCTCATGTGCTGAGTGACACAT
TGGTTCGCTTGGCATACACAAATATTTAGTCAAGGATTCGACCAGCACGC
AGTAGAGGAGCAGCCAAAGGCAGCTGCGAAGCAGATATTATCCCGCGAGG
CATCGTCGACCTCCCCCCCCTCACCTATTCTCGAAGCCTCCCGTAACTCC
CCTTCTCGCCTGGCCCTTCACATCTTCCTTTATCAACAACCATGGCTGAC
GCCCTAACCGACGATAAACATAAAAAGAAACTCTCGCGGAAGGAGCGGGA
ACGGGAGCTGCGTGCCCTATCCTCGGACGGAACCGGGTGTGGCTTTAAAA
AAGACCTGGTGGCTGATAGACACCTAGACGACCAACGCTACGAGCGCGAG
CTCGCCTTCAAAAAGCAACAACAAGCCACCGCCGCAGCTGGAGGGAAAGA
CGGAGGGGGAAAAGCTATTCCAGGCGTGATGATTGGAGCACCTCCTCCCT
CCGCGGCGTTTGATACGTTGCTACGGATGGAAGCGGGGTTGGGACAGAGG
ACAATTCATGATAGTATTAATGACCCGAATCGACCGACGTGGGAGGATTA
CAAAAAGGCCAAGGCCGATAAGCTTGATCTGACAGGAGCAGATGACCGGA
AGATGATTGAGTACAGGGCACAGCTGGATGCGGAGCGAGCCCGTAGATTG
GCACAGAACCGTGGGGAGAAGGTGGACGAAAAGGGGGAGAAGAAGAAGAA
GAGGAGCAGCAGCAAGAAAGATAGCAAGAAGAAGAAGAGGAAGAAGGATA
GTCGGAAGAAGGACAATAAAAAGAGGAAACACAAGAAGGAAGACAAGAAA
AGGCCGCTTAAAAAGCGAAGACGGTCATCGTCGTCTTTGGAGGAGGAGAA
TGAAGGAATGGATGAAGAGGAGGGACGAGAGAAGCTTGACGGAGAAAATG
GGGAGAAGGAGAAGGAGACGGAGAAAGTCAGAGGGAATAAGGGCGAACGC
GGCAGTGGAGATGACAAGGACAAGACTTCTTCGTCGGGGGAGGAAGAAAG
AAGTGGTAGGGATGGCAGTGCCAGAGACGACAAAAAAAAGAGCAAAAAGA
AGAAGAGGCAGCGCCGACGGGACTCCTCCTCCTCCTCTTCTTCCTCATCG
TCGTCCTCTTCCTCCGACTCTGAAGCGTCTGACAGCTCAGGCCCTGTGCA
GCTTTCTTCCTTCTTGAGAGGCCGCAAGGAAGCGACCGACAGCGAAAGTG
ACTGAGGCAGAATACAGACTGTAATGAGAGTACATGATTGAAAAAAAGAA
TGACGAAAAAGTAAATGAAACAATGGAGATGCGTAGCGTGAG back to topprotein sequence of jgi.p|Nanoce1779_2|631409 >mRNA_6233-protein ID=mRNA_6233-protein|Name=jgi.p|Nanoce1779_2|631409|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MADALTDDKHKKKLSRKERERELRALSSDGTGCGFKKDLVADRHLDDQRY
ERELAFKKQQQATAAAGGKDGGGKAIPGVMIGAPPPSAAFDTLLRMEAGL
GQRTIHDSINDPNRPTWEDYKKAKADKLDLTGADDRKMIEYRAQLDAERA
RRLAQNRGEKVDEKGEKKKKRSSSKKDSKKKKRKKDSRKKDNKKRKHKKE
DKKRPLKKRRRSSSSLEEENEGMDEEEGREKLDGENGEKEKETEKVRGNK
GERGSGDDKDKTSSSGEEERSGRDGSARDDKKKSKKKKRQRRRDSSSSSS
SSSSSSSSDSEASDSSGPVQLSSFLRGRKEATDSESD* back to topmRNA from alignment at scaffold_15:76406..79038- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6233 ID=mRNA_6233|Name=jgi.p|Nanoce1779_2|631409|organism=Nannochloropsis oceanica|type=mRNA|length=2633bp|location=Sequence derived from alignment at scaffold_15:76406..79038- (Nannochloropsis oceanica)
AACAAGTTTATTTGCTACTACTTCATGATGCCTGCCAATGCAGCTTTCTC
CACCTTCCTTGATGTACATACTTACTGGCCCTGATCATTCAGATCTTCAA
CAGAAATCAATTCTCTGTAGAGCTTGATTCACCGGTATGCTTGCGGTAAT
ACAGATAATCACTACTTGCGCCTTACTCCGTTCACATATAAGACGTGCCT
CTTCTTCACCAATTACAGACCAGCACTGATTTGGAGTTTTCTTCGTCATC
CGCAACCTCCCGCACATGGCCTTACTTCCGTCACAAGCTGTGATATGTTC
AAGCTATAGCGATGAACATCACCATGAATGTCCTAAGTAGTAGGGGAAAA
TGGCTTTAGCTCGATCCATTTTTCCGCTTCCCCCCGCGCCACCTGCTCGC
AAAAATCATACTCCATCCCTGTTTGTTCTTTTCATTTTTTGTGGATTTTA
ATCACCATTACGTACTTTGCCACGAGCATGATGGTATCTACCTCTATCAT
ATGAAGAGCATCAAAATAAGCCACGGATGGTTTCCGGGTAATCGACAATT
TCCTTGATGAAGCACTTTCGCGTAGTGTTCATGCTGCACACTACTTTTCC
CTCGTTGTAGTGTATTTGAGCTTCGAGTGATGGATGCTTGTCAAAATTAC
TTCGCCCCCCTCAACAGATGCCATGGACTCGACCGGAACCAGAGTGTCCA
TGGGGCTGACACCAAGGATTCGAGCAGCGGAATCGACTGATGCCACGAGG
GAGTCCGGCACAATTGATGCTAAGCCATTCAGGATCACAATTGTGTTTTC
GACGCAAATTCTAATTATCTGTGATAGGCATTGATTTTCCGATGGCTTTC
CAGCGCAGCGCTACTTGATACTTTGGTTCTCCTCGATTATTTTCTCTGTC
GATCCCCTGATTTCGAACACAGGTCCTGAACTTGGATGAGTTCAGCGATT
CCCTCGGAGTCACTCCAGGCCTTCCCTGAGGGCATGCGGCAGGGTACCCG
GCTTTTGCCTCACCGCCTGCCCTTATCGTCTCATGTGCTGAGTGACACAT
TGGTTCGCTTGGCATACACAAATATTTAGGTACATCAAGGAAAGGGCTTT
CCAGCTACGGGATAGCGCATGCGCGTGTGGGGGAAGGGGGGGAAAAAGTA
AATGCAACGGTTGCTAGCTAGCCTCTGCCCTCATTTCTCCTGAAATGCGT
ATCTCGCAGCGCACTCACGCCACACCTCCTTTTTTACAAAACTCACGTCC
ACACAGTCAAGGATTCGACCAGCACGCAGTAGAGGAGCAGCCAAAGGCAG
CTGCGAAGCAGATATTATCCCGCGAGGCATCGTCGACCTCCCCCCCCTCA
CCTATTCTCGAAGCCTCCCGTAACTCCCCTTCTCGCCTGGCCCTTCACAT
CTTCCTTTATCAACAACCATGGCTGACGCCCTAACCGACGATAAACATAA
AAAGAAACTCTCGCGGAAGGAGCGGGAACGGGAGCTGCGTGCCCTATCCT
CGGACGGAACCGGGTGTGGCTTTAAAAAAGACCTGGTGGCTGATAGACAC
CTAGACGACCAACGCTACGAGCGCGAGCTCGCCTTCAAAAAGCAACAACA
AGCCACCGCCGCAGCTGGAGGGAAAGACGGAGGGGGAAAAGCTATTCCAG
GCGTGATGATTGGAGCACCTCCTCCCTCCGCGGCGTTTGATACGTTGCTA
CGGATGGAAGCGGGGTTGGGACAGAGGACAATTCATGATAGTATTAATGA
CCCGAATCGACCGACGTGGGAGGATTACAAAAAGGCCAAGGCCGATAAGC
TTGATCTGGTACGTGATAGGGGAGAGAGGGAGAGAAGAGGAGAGGAGAGT
TGGTCTGTAAAGTCATGAGTTTTTACTTTTTGTTCAACTTAACTCCTTCC
ACACTACCCGACAATAACACAGACAGGAGCAGATGACCGGAAGATGATTG
AGTACAGGGCACAGCTGGATGCGGAGCGAGCCCGTAGATTGGCACAGAAC
CGTGGGGAGAAGGTGGACGAAAAGGGGGAGAAGAAGAAGAAGAGGAGCAG
CAGCAAGAAAGATAGCAAGAAGAAGAAGAGGAAGAAGGATAGTCGGAAGA
AGGACAATAAAAAGAGGAAACACAAGAAGGAAGACAAGAAAAGGCCGCTT
AAAAAGCGAAGACGGTCATCGTCGTCTTTGGAGGAGGAGAATGAAGGAAT
GGATGAAGAGGAGGGACGAGAGAAGCTTGACGGAGAAAATGGGGAGAAGG
AGAAGGAGACGGAGAAAGTCAGAGGGAATAAGGGCGAACGCGGCAGTGGA
GATGACAAGGACAAGACTTCTTCGTCGGGGGAGGAAGAAAGAAGTGGTAG
GGATGGCAGTGCCAGAGACGACAAAAAAAAGAGCAAAAAGAAGAAGAGGC
AGCGCCGACGGGACTCCTCCTCCTCCTCTTCTTCCTCATCGTCGTCCTCT
TCCTCCGACTCTGAAGCGTCTGACAGCTCAGGCCCTGTGCAGCTTTCTTC
CTTCTTGAGAGGCCGCAAGGAAGCGACCGACAGCGAAAGTGACTGAGGCA
GAATACAGACTGTAATGAGAGTACATGATTGAAAAAAAGAATGACGAAAA
AGTAAATGAAACAATGGAGATGCGTAGCGTGAG back to topCoding sequence (CDS) from alignment at scaffold_15:76406..79038- >mRNA_6233 ID=mRNA_6233|Name=jgi.p|Nanoce1779_2|631409|organism=Nannochloropsis oceanica|type=CDS|length=2028bp|location=Sequence derived from alignment at scaffold_15:76406..79038- (Nannochloropsis oceanica)
ACAGGAGCAGATGACCGGAAGATGATTGAGTACAGGGCACAGCTGGATGC
GGAGCGAGCCCGTAGATTGGCACAGAACCGTGGGGAGAAGGTGGACGAAA
AGGGGGAGAAGAAGAAGAAGAGGAGCAGCAGCAAGAAAGATAGCAAGAAG
AAGAAGAGGAAGAAGGATAGTCGGAAGAAGGACAATAAAAAGAGGAAACA
CAAGAAGGAAGACAAGAAAAGGCCGCTTAAAAAGCGAAGACGGTCATCGT
CGTCTTTGGAGGAGGAGAATGAAGGAATGGATGAAGAGGAGGGACGAGAG
AAGCTTGACGGAGAAAATGGGGAGAAGGAGAAGGAGACGGAGAAAGTCAG
AGGGAATAAGGGCGAACGCGGCAGTGGAGATGACAAGGACAAGACTTCTT
CGTCGGGGGAGGAAGAAAGAAGTGGTAGGGATGGCAGTGCCAGAGACGAC
AAAAAAAAGAGCAAAAAGAAGAAGAGGCAGCGCCGACGGGACTCCTCCTC
CTCCTCTTCTTCCTCATCGTCGTCCTCTTCCTCCGACTCTGAAGCGTCTG
ACAGCTCAGGCCCTGTGCAGCTTTCTTCCTTCTTGAGAGGCCGCAAGGAA
GCGACCGACAGCGAAAGTGACTGAATGGCTGACGCCCTAACCGACGATAA
ACATAAAAAGAAACTCTCGCGGAAGGAGCGGGAACGGGAGCTGCGTGCCC
TATCCTCGGACGGAACCGGGTGTGGCTTTAAAAAAGACCTGGTGGCTGAT
AGACACCTAGACGACCAACGCTACGAGCGCGAGCTCGCCTTCAAAAAGCA
ACAACAAGCCACCGCCGCAGCTGGAGGGAAAGACGGAGGGGGAAAAGCTA
TTCCAGGCGTGATGATTGGAGCACCTCCTCCCTCCGCGGCGTTTGATACG
TTGCTACGGATGGAAGCGGGGTTGGGACAGAGGACAATTCATGATAGTAT
TAATGACCCGAATCGACCGACGTGGGAGGATTACAAAAAGGCCAAGGCCG
ATAAGCTTGATCTGACAGGAGCAGATGACCGGAAGATGATTGAGTACAGG
GCACAGCTGGATGCGGAGCGAGCCCGTAGATTGGCACAGAACCGTGGGGA
GAAGGTGGACGAAAAGGGGGAGAAGAAGAAGAAGAGGAGCAGCAGCAAGA
AAGATAGCAAGAAGAAGAAGAGGAAGAAGGATAGTCGGAAGAAGGACAAT
AAAAAGAGGAAACACAAGAAGGAAGACAAGAAAAGGCCGCTTAAAAAGCG
AAGACGGTCATCGTCGTCTTTGGAGGAGGAGAATGAAGGAATGGATGAAG
AGGAGGGACGAGAGAAGCTTGACGGAGAAAATGGGGAGAAGGAGAAGGAG
ACGGAGAAAGTCAGAGGGAATAAGGGCGAACGCGGCAGTGGAGATGACAA
GGACAAGACTTCTTCGTCGGGGGAGGAAGAAAGAAGTGGTAGGGATGGCA
GTGCCAGAGACGACAAAAAAAAGAGCAAAAAGAAGAAGAGGCAGCGCCGA
CGGGACTCCTCCTCCTCCTCTTCTTCCTCATCGTCGTCCTCTTCCTCCGA
CTCTGAAGCGTCTGACAGCTCAGGCCCTGTGCAGCTTTCTTCCTTCTTGA
GAGGCCGCAAGGAAGCGACCGACAGCGAAAGTGACTGAATGGCTGACGCC
CTAACCGACGATAAACATAAAAAGAAACTCTCGCGGAAGGAGCGGGAACG
GGAGCTGCGTGCCCTATCCTCGGACGGAACCGGGTGTGGCTTTAAAAAAG
ACCTGGTGGCTGATAGACACCTAGACGACCAACGCTACGAGCGCGAGCTC
GCCTTCAAAAAGCAACAACAAGCCACCGCCGCAGCTGGAGGGAAAGACGG
AGGGGGAAAAGCTATTCCAGGCGTGATGATTGGAGCACCTCCTCCCTCCG
CGGCGTTTGATACGTTGCTACGGATGGAAGCGGGGTTGGGACAGAGGACA
ATTCATGATAGTATTAATGACCCGAATCGACCGACGTGGGAGGATTACAA
AAAGGCCAAGGCCGATAAGCTTGATCTG back to top
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