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Properties
| Property Name | Value |
| TranscriptId | 573635 |
| Track | FilteredModels2 |
| ProteinId | 573549 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_2 | supercontig | scaffold_2:32289..34360 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_621 ID=mRNA_621|Name=jgi.p|Nanoce1779_2|573549|organism=Nannochloropsis oceanica|type=mRNA|length=1381bp ACAGGCAATATACACCCTTTAGGGACAACCAACTATGCGACTAGTACGCT CTTATAATCTGGGCATCATAACTATTATGTCCTTTGCTTTGACCAATATG ATAGCGGCAGACAACTCAGAGCCCCTCACGGGCTGGTTCATGAAGTCCAT ACATGGTCGGTCAACCTACTACGGGAACTACCAAGGCGGCGGTGCTTGTG GACTAGATCAACCAGACGGCATGGCCCTCCCCCCCGAGGTCAAAGGCATC GATTTTACAGTAGCCTTGGACCAGGCCCAGTTTAATCTAGGGGGCTGCGG GATGTGTATTCAGCTCACGGGAACGGGGGTAGGCGCAGGAGGAAACCCTG TGACGGGTAATTATACGGTGTTTGTGAACAATCTGTGCCCGGAGTGCGAG TTCGGTCATCTGGACTTTGCTACCCCGGGGGATGGCAGCTGGGACATAGA GTGGAAAGCCATTCCCTGCGATGTTGGCGACCACAAAATGCGCTTTGTCT TCATGGGCTCCAATGACTTCTATCTCAAGGTCTCCACCCAAGCCGCCCGC GTCCCGACCAAGGCCCTCCGCCTCAAGGTGGGAGAAGAGTGGAAGGAAGG CACGCCGGTGCATGGCTCCTACTTTGAATTCAGGGATGGGGCCCCCTTCT CGTTCCCAATAGAAGTGGAGGTGACGTCGGTATTTGGGGAGGTGCTGAAG GACGAGATTGTCTCGTTGCAGGGCGGGCCCAGTACCATCCAATACGACGA TCGTCGCGCGCAGCCCACGGACGGAGAGCTCGCTGCGGCACAGTGGGGCG AAGAGCCACCCACCGATGACGACATCGAGGAAGGCCCAGCCCCTAGCGCT ACTGAGAAGCCTCACACTACCAGTAGGAGTGACAGAAAAAGCTACGGGAA TGACAAAGCAACCAACAGCACCAGTGCCCCTGCTTCGCCTGAAACAGTGG CAGATAGGGAAGCGATGCTGCTGGATGGGGGCAGAGGAATGGAGGAGCAG ATGCATGAGAAGGAGGAGAAGGAGGAGATGGGACGGGCCTTGTCGAATGG ACATAAGACGGAAACGGCAGCCTTGCGACAGTTGTTGCGCGGAGCGGGCG TCAGGAGGCAGGCCACGGCATGAGGAGAGAAGGTTTGCGGTTGAGCGAGG AGGTGACGGCAGCGGGGAAGTGAGAGTGAGGGGAAAAGCTTTAACGTGTA AAGAGAGGAACGGGGGGTCCCCTTCCTTAGATCTCGTGAGAAATGAGTGA TGTGTGGCTTGTCCTTTTCGTAGGCTTGGCCGCGTGGAGAGGGCCAGAGA AAGGCAAGGATATTCGCTCTGCGGGGAAAAGGGAAAGAAATGGGAGCAAA TAAAGTAATCGAAAGTGCATAGATATGCGCA back to topprotein sequence of jgi.p|Nanoce1779_2|573549 >mRNA_621-protein ID=mRNA_621-protein|Name=jgi.p|Nanoce1779_2|573549|organism=Nannochloropsis oceanica|type=polypeptide|length=363bp MRLVRSYNLGIITIMSFALTNMIAADNSEPLTGWFMKSIHGRSTYYGNYQ GGGACGLDQPDGMALPPEVKGIDFTVALDQAQFNLGGCGMCIQLTGTGVG AGGNPVTGNYTVFVNNLCPECEFGHLDFATPGDGSWDIEWKAIPCDVGDH KMRFVFMGSNDFYLKVSTQAARVPTKALRLKVGEEWKEGTPVHGSYFEFR DGAPFSFPIEVEVTSVFGEVLKDEIVSLQGGPSTIQYDDRRAQPTDGELA AAQWGEEPPTDDDIEEGPAPSATEKPHTTSRSDRKSYGNDKATNSTSAPA SPETVADREAMLLDGGRGMEEQMHEKEEKEEMGRALSNGHKTETAALRQL LRGAGVRRQATA* back to topmRNA from alignment at scaffold_2:32289..34360+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_621 ID=mRNA_621|Name=jgi.p|Nanoce1779_2|573549|organism=Nannochloropsis oceanica|type=mRNA|length=2072bp|location=Sequence derived from alignment at scaffold_2:32289..34360+ (Nannochloropsis oceanica) ACAGGCAATATACACCCTTTAGGGACAACCAACTATGCGACTAGTACGCT
CTTATAATCTGGGCATCATAACTATTATGTCCTTTGCTTTGACCAATATG
ATAGCGGCAGACAACTCAGAGCCCCTCACGGGCTGGTTCATGAAGTCCAT
ACATGGTCGGGTACGTGACGAACAAGAAGGGAGGAAGGGATAGAACGACC
GTGGGGGACGACGTATTGTAGCTTTAAAGACTTGGTATACATCTCCAGCG
GCTTGTTTCTCCAATCATGTTGACCTAATCCTTTACTCTAAACCATATTC
CCCCCCCCCCTTCCCCCCCTCCCGCCCCGCCCTGCCCTCTCTTAGTCAAC
CTACTACGGGAACTACCAAGGCGGCGGTGCTTGTGGACTAGATCAACCAG
ACGGCATGGCCCTCCCCCCCGAGGTACGTATACCGCTACCCTCCCTCCCC
CTCTCACTTCCTTTTTCCCTCGTTTCTAACCCCTCCATTTCTCCTCGCAC
ACCCTTGAACACGGATTTTAGGTCAAAGGCATCGATTTTACAGTAGCCTT
GGACCAGGCCCAGTTTAATCTAGGGGGCTGCGGGATGTGTATTCAGCTCA
CGGGAACGGGGGTAGGCGCAGGAGGAAACCCTGTGACGGGTAATTATACG
GTGTTTGTGAACAATCTGTGCCCGGAGTGCGAGTTCGGTCATCTGGACTT
TGCTACCCCGGGGGATGGCAGCTGGGACATAGAGTGGTGCGTGAGGAAGG
AGGGAGGGAGGGAGGGAGAGAAGGGGAGAGGGAGGGAAATGTGGAGAGAG
AGGGGCCTTTTCCATGCACGGGAAGACAAGACATCCTTTCAGGCAAGCAG
CTTGCTCACATACAGAAAACTGTTACAGGAAAGCCATTCCCTGCGATGTT
GGCGACCACAAAATGCGCTTTGTCTTCATGGTAAGCAAGCACTCCCCCAC
CAGCTTCGCCACAGCAACCTTATTCGACCCATTGTATCTATCCACCCCTC
CTGTCGTTCCTCCCTCATTCCCTCCTTTCTCCCTTCCCTTCCCTCAGGGC
TCCAATGACTTCTATCTCAAGGTCTCCACCCAAGCCGCCCGCGTCCCGAC
CAAGGCCCTCCGCCTCAAGGTGGGAGAAGAGTGGAAGGAAGGCACGCCGG
TGCATGGCTCCTACTTTGAATTCAGGGATGGGGCCCCCTTCTCGTTCCCA
ATAGAAGTGGAGGTGACGTCGGTATTTGGGGAGGTGCTGAAGGACGAGAT
TGTCTCGTTGCAGGTGAGGAGGGAGGGAGGGAGGGAGAGAGCAACAGAGA
AGAGGGAAGGCGAGGAGGAGCGAGAACGGCATGAGAAATTTCAGCACCAC
GCACCCTCCTTACCCTCTACACCCCACCCTTTCACATATCCCCACCTCCC
CTCTCGGTCTAGGGCGGGCCCAGTACCATCCAATACGACGATCGTCGCGC
GCAGCCCACGGACGGAGAGCTCGCTGCGGCACAGTGGGGCGAAGAGCCAC
CCACCGATGACGACATCGAGGAAGGCCCAGCCCCTAGCGCTACTGAGAAG
CCTCACACTACCAGTAGGAGTGACAGAAAAAGCTACGGGAATGACAAAGC
AACCAACAGCACCAGTGCCCCTGCTTCGCCTGAAACAGTGGCAGATAGGG
AAGCGATGCTGCTGGATGGGGGCAGAGGAATGGAGGAGCAGATGCATGAG
AAGGAGGAGAAGGAGGAGATGGGACGGGCCTTGTCGAATGGACATAAGAC
GGAAACGGCAGCCTTGCGACAGTTGTTGCGCGGAGCGGGCGTCAGGAGGC
AGGCCACGGCATGAGGAGAGAAGGTTTGCGGTTGAGCGAGGAGGTGACGG
CAGCGGGGAAGTGAGAGTGAGGGGAAAAGCTTTAACGTGTAAAGAGAGGA
ACGGGGGGTCCCCTTCCTTAGATCTCGTGAGAAATGAGTGATGTGTGGCT
TGTCCTTTTCGTAGGCTTGGCCGCGTGGAGAGGGCCAGAGAAAGGCAAGG
ATATTCGCTCTGCGGGGAAAAGGGAAAGAAATGGGAGCAAATAAAGTAAT
CGAAAGTGCATAGATATGCGCA back to topCoding sequence (CDS) from alignment at scaffold_2:32289..34360+ >mRNA_621 ID=mRNA_621|Name=jgi.p|Nanoce1779_2|573549|organism=Nannochloropsis oceanica|type=CDS|length=6534bp|location=Sequence derived from alignment at scaffold_2:32289..34360+ (Nannochloropsis oceanica) ATGCGACTAGTACGCTCTTATAATCTGGGCATCATAACTATTATGTCCTT TGCTTTGACCAATATGATAGCGGCAGACAACTCAGAGCCCCTCACGGGCT GGTTCATGAAGTCCATACATGGTCGGTCAACCTACTACGGGAACTACCAA GGCGGCGGTGCTTGTGGACTAGATCAACCAGACGGCATGGCCCTCCCCCC CGAGGTCAAAGGCATCGATTTTACAGTAGCCTTGGACCAGGCCCAGTTTA ATCTAGGGGGCTGCGGGATGTGTATTCAGCTCACGGGAACGGGGGTAGGC GCAGGAGGAAACCCTGTGACGGGTAATTATACGGTGTTTGTGAACAATCT GTGCCCGGAGTGCGAGTTCGGTCATCTGGACTTTGCTACCCCGGGGGATG GCAGCTGGGACATAGAGTGGAAAGCCATTCCCTGCGATGTTGGCGACCAC AAAATGCGCTTTGTCTTCATGGGCTCCAATGACTTCTATCTCAAGGTCTC CACCCAAGCCGCCCGCGTCCCGACCAAGGCCCTCCGCCTCAAGGTGGGAG AAGAGTGGAAGGAAGGCACGCCGGTGCATGGCTCCTACTTTGAATTCAGG GATGGGGCCCCCTTCTCGTTCCCAATAGAAGTGGAGGTGACGTCGGTATT TGGGGAGGTGCTGAAGGACGAGATTGTCTCGTTGCAGGGCGGGCCCAGTA CCATCCAATACGACGATCGTCGCGCGCAGCCCACGGACGGAGAGCTCGCT GCGGCACAGTGGGGCGAAGAGCCACCCACCGATGACGACATCGAGGAAGG CCCAGCCCCTAGCGCTACTGAGAAGCCTCACACTACCAGTAGGAGTGACA GAAAAAGCTACGGGAATGACAAAGCAACCAACAGCACCAGTGCCCCTGCT TCGCCTGAAACAGTGGCAGATAGGGAAGCGATGCTGCTGGATGGGGGCAG AGGAATGGAGGAGCAGATGCATGAGAAGGAGGAGAAGGAGGAGATGGGAC GGGCCTTGTCGAATGGACATAAGACGGAAACGGCAGCCTTGCGACAGTTG TTGCGCGGAGCGGGCGTCAGGAGGCAGGCCACGGCATGAATGCGACTAGT ACGCTCTTATAATCTGGGCATCATAACTATTATGTCCTTTGCTTTGACCA ATATGATAGCGGCAGACAACTCAGAGCCCCTCACGGGCTGGTTCATGAAG TCCATACATGGTCGGTCAACCTACTACGGGAACTACCAAGGCGGCGGTGC TTGTGGACTAGATCAACCAGACGGCATGGCCCTCCCCCCCGAGGTCAAAG GCATCGATTTTACAGTAGCCTTGGACCAGGCCCAGTTTAATCTAGGGGGC TGCGGGATGTGTATTCAGCTCACGGGAACGGGGGTAGGCGCAGGAGGAAA CCCTGTGACGGGTAATTATACGGTGTTTGTGAACAATCTGTGCCCGGAGT GCGAGTTCGGTCATCTGGACTTTGCTACCCCGGGGGATGGCAGCTGGGAC ATAGAGTGGAAAGCCATTCCCTGCGATGTTGGCGACCACAAAATGCGCTT TGTCTTCATGGGCTCCAATGACTTCTATCTCAAGGTCTCCACCCAAGCCG CCCGCGTCCCGACCAAGGCCCTCCGCCTCAAGGTGGGAGAAGAGTGGAAG GAAGGCACGCCGGTGCATGGCTCCTACTTTGAATTCAGGGATGGGGCCCC CTTCTCGTTCCCAATAGAAGTGGAGGTGACGTCGGTATTTGGGGAGGTGC TGAAGGACGAGATTGTCTCGTTGCAGGGCGGGCCCAGTACCATCCAATAC GACGATCGTCGCGCGCAGCCCACGGACGGAGAGCTCGCTGCGGCACAGTG GGGCGAAGAGCCACCCACCGATGACGACATCGAGGAAGGCCCAGCCCCTA GCGCTACTGAGAAGCCTCACACTACCAGTAGGAGTGACAGAAAAAGCTAC GGGAATGACAAAGCAACCAACAGCACCAGTGCCCCTGCTTCGCCTGAAAC AGTGGCAGATAGGGAAGCGATGCTGCTGGATGGGGGCAGAGGAATGGAGG AGCAGATGCATGAGAAGGAGGAGAAGGAGGAGATGGGACGGGCCTTGTCG AATGGACATAAGACGGAAACGGCAGCCTTGCGACAGTTGTTGCGCGGAGC GGGCGTCAGGAGGCAGGCCACGGCATGAATGCGACTAGTACGCTCTTATA ATCTGGGCATCATAACTATTATGTCCTTTGCTTTGACCAATATGATAGCG GCAGACAACTCAGAGCCCCTCACGGGCTGGTTCATGAAGTCCATACATGG TCGGTCAACCTACTACGGGAACTACCAAGGCGGCGGTGCTTGTGGACTAG ATCAACCAGACGGCATGGCCCTCCCCCCCGAGGTCAAAGGCATCGATTTT ACAGTAGCCTTGGACCAGGCCCAGTTTAATCTAGGGGGCTGCGGGATGTG TATTCAGCTCACGGGAACGGGGGTAGGCGCAGGAGGAAACCCTGTGACGG GTAATTATACGGTGTTTGTGAACAATCTGTGCCCGGAGTGCGAGTTCGGT CATCTGGACTTTGCTACCCCGGGGGATGGCAGCTGGGACATAGAGTGGAA AGCCATTCCCTGCGATGTTGGCGACCACAAAATGCGCTTTGTCTTCATGG GCTCCAATGACTTCTATCTCAAGGTCTCCACCCAAGCCGCCCGCGTCCCG ACCAAGGCCCTCCGCCTCAAGGTGGGAGAAGAGTGGAAGGAAGGCACGCC GGTGCATGGCTCCTACTTTGAATTCAGGGATGGGGCCCCCTTCTCGTTCC CAATAGAAGTGGAGGTGACGTCGGTATTTGGGGAGGTGCTGAAGGACGAG ATTGTCTCGTTGCAGGGCGGGCCCAGTACCATCCAATACGACGATCGTCG CGCGCAGCCCACGGACGGAGAGCTCGCTGCGGCACAGTGGGGCGAAGAGC CACCCACCGATGACGACATCGAGGAAGGCCCAGCCCCTAGCGCTACTGAG AAGCCTCACACTACCAGTAGGAGTGACAGAAAAAGCTACGGGAATGACAA AGCAACCAACAGCACCAGTGCCCCTGCTTCGCCTGAAACAGTGGCAGATA GGGAAGCGATGCTGCTGGATGGGGGCAGAGGAATGGAGGAGCAGATGCAT GAGAAGGAGGAGAAGGAGGAGATGGGACGGGCCTTGTCGAATGGACATAA GACGGAAACGGCAGCCTTGCGACAGTTGTTGCGCGGAGCGGGCGTCAGGA GGCAGGCCACGGCATGAATGCGACTAGTACGCTCTTATAATCTGGGCATC ATAACTATTATGTCCTTTGCTTTGACCAATATGATAGCGGCAGACAACTC AGAGCCCCTCACGGGCTGGTTCATGAAGTCCATACATGGTCGGTCAACCT ACTACGGGAACTACCAAGGCGGCGGTGCTTGTGGACTAGATCAACCAGAC GGCATGGCCCTCCCCCCCGAGGTCAAAGGCATCGATTTTACAGTAGCCTT GGACCAGGCCCAGTTTAATCTAGGGGGCTGCGGGATGTGTATTCAGCTCA CGGGAACGGGGGTAGGCGCAGGAGGAAACCCTGTGACGGGTAATTATACG GTGTTTGTGAACAATCTGTGCCCGGAGTGCGAGTTCGGTCATCTGGACTT TGCTACCCCGGGGGATGGCAGCTGGGACATAGAGTGGAAAGCCATTCCCT GCGATGTTGGCGACCACAAAATGCGCTTTGTCTTCATGGGCTCCAATGAC TTCTATCTCAAGGTCTCCACCCAAGCCGCCCGCGTCCCGACCAAGGCCCT CCGCCTCAAGGTGGGAGAAGAGTGGAAGGAAGGCACGCCGGTGCATGGCT CCTACTTTGAATTCAGGGATGGGGCCCCCTTCTCGTTCCCAATAGAAGTG GAGGTGACGTCGGTATTTGGGGAGGTGCTGAAGGACGAGATTGTCTCGTT GCAGGGCGGGCCCAGTACCATCCAATACGACGATCGTCGCGCGCAGCCCA CGGACGGAGAGCTCGCTGCGGCACAGTGGGGCGAAGAGCCACCCACCGAT GACGACATCGAGGAAGGCCCAGCCCCTAGCGCTACTGAGAAGCCTCACAC TACCAGTAGGAGTGACAGAAAAAGCTACGGGAATGACAAAGCAACCAACA GCACCAGTGCCCCTGCTTCGCCTGAAACAGTGGCAGATAGGGAAGCGATG CTGCTGGATGGGGGCAGAGGAATGGAGGAGCAGATGCATGAGAAGGAGGA GAAGGAGGAGATGGGACGGGCCTTGTCGAATGGACATAAGACGGAAACGG CAGCCTTGCGACAGTTGTTGCGCGGAGCGGGCGTCAGGAGGCAGGCCACG GCATGAATGCGACTAGTACGCTCTTATAATCTGGGCATCATAACTATTAT GTCCTTTGCTTTGACCAATATGATAGCGGCAGACAACTCAGAGCCCCTCA CGGGCTGGTTCATGAAGTCCATACATGGTCGGTCAACCTACTACGGGAAC TACCAAGGCGGCGGTGCTTGTGGACTAGATCAACCAGACGGCATGGCCCT CCCCCCCGAGGTCAAAGGCATCGATTTTACAGTAGCCTTGGACCAGGCCC AGTTTAATCTAGGGGGCTGCGGGATGTGTATTCAGCTCACGGGAACGGGG GTAGGCGCAGGAGGAAACCCTGTGACGGGTAATTATACGGTGTTTGTGAA CAATCTGTGCCCGGAGTGCGAGTTCGGTCATCTGGACTTTGCTACCCCGG GGGATGGCAGCTGGGACATAGAGTGGAAAGCCATTCCCTGCGATGTTGGC GACCACAAAATGCGCTTTGTCTTCATGGGCTCCAATGACTTCTATCTCAA GGTCTCCACCCAAGCCGCCCGCGTCCCGACCAAGGCCCTCCGCCTCAAGG TGGGAGAAGAGTGGAAGGAAGGCACGCCGGTGCATGGCTCCTACTTTGAA TTCAGGGATGGGGCCCCCTTCTCGTTCCCAATAGAAGTGGAGGTGACGTC GGTATTTGGGGAGGTGCTGAAGGACGAGATTGTCTCGTTGCAGGGCGGGC CCAGTACCATCCAATACGACGATCGTCGCGCGCAGCCCACGGACGGAGAG CTCGCTGCGGCACAGTGGGGCGAAGAGCCACCCACCGATGACGACATCGA GGAAGGCCCAGCCCCTAGCGCTACTGAGAAGCCTCACACTACCAGTAGGA GTGACAGAAAAAGCTACGGGAATGACAAAGCAACCAACAGCACCAGTGCC CCTGCTTCGCCTGAAACAGTGGCAGATAGGGAAGCGATGCTGCTGGATGG GGGCAGAGGAATGGAGGAGCAGATGCATGAGAAGGAGGAGAAGGAGGAGA TGGGACGGGCCTTGTCGAATGGACATAAGACGGAAACGGCAGCCTTGCGA CAGTTGTTGCGCGGAGCGGGCGTCAGGAGGCAGGCCACGGCATGAATGCG ACTAGTACGCTCTTATAATCTGGGCATCATAACTATTATGTCCTTTGCTT TGACCAATATGATAGCGGCAGACAACTCAGAGCCCCTCACGGGCTGGTTC ATGAAGTCCATACATGGTCGGTCAACCTACTACGGGAACTACCAAGGCGG CGGTGCTTGTGGACTAGATCAACCAGACGGCATGGCCCTCCCCCCCGAGG TCAAAGGCATCGATTTTACAGTAGCCTTGGACCAGGCCCAGTTTAATCTA GGGGGCTGCGGGATGTGTATTCAGCTCACGGGAACGGGGGTAGGCGCAGG AGGAAACCCTGTGACGGGTAATTATACGGTGTTTGTGAACAATCTGTGCC CGGAGTGCGAGTTCGGTCATCTGGACTTTGCTACCCCGGGGGATGGCAGC TGGGACATAGAGTGGAAAGCCATTCCCTGCGATGTTGGCGACCACAAAAT GCGCTTTGTCTTCATGGGCTCCAATGACTTCTATCTCAAGGTCTCCACCC AAGCCGCCCGCGTCCCGACCAAGGCCCTCCGCCTCAAGGTGGGAGAAGAG TGGAAGGAAGGCACGCCGGTGCATGGCTCCTACTTTGAATTCAGGGATGG GGCCCCCTTCTCGTTCCCAATAGAAGTGGAGGTGACGTCGGTATTTGGGG AGGTGCTGAAGGACGAGATTGTCTCGTTGCAGGGCGGGCCCAGTACCATC CAATACGACGATCGTCGCGCGCAGCCCACGGACGGAGAGCTCGCTGCGGC ACAGTGGGGCGAAGAGCCACCCACCGATGACGACATCGAGGAAGGCCCAG CCCCTAGCGCTACTGAGAAGCCTCACACTACCAGTAGGAGTGACAGAAAA AGCTACGGGAATGACAAAGCAACCAACAGCACCAGTGCCCCTGCTTCGCC TGAAACAGTGGCAGATAGGGAAGCGATGCTGCTGGATGGGGGCAGAGGAA TGGAGGAGCAGATGCATGAGAAGGAGGAGAAGGAGGAGATGGGACGGGCC TTGTCGAATGGACATAAGACGGAAACGGCAGCCTTGCGACAGTTGTTGCG CGGAGCGGGCGTCAGGAGGCAGGCCACGGCATGA back to top
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