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Properties
| Property Name | Value |
|---|
| TranscriptId | 631475 |
| Track | FilteredModels2 |
| ProteinId | 631389 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:790044..792991 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6201 ID=mRNA_6201|Name=jgi.p|Nanoce1779_2|631389|organism=Nannochloropsis oceanica|type=mRNA|length=1126bp
ACAGGCGGAAAGATGGAGCCCTCTCACATGGATATAGCGCCGATGATGGT
AGACGACGACGATGAGGATGATATACTCCCAGCCGCCTCCCTCGCTCCAG
CAACGACTCTCCTCCGAGAGCAGGCCCTCGGGCTACTGAGTGACGCGCAG
ACGGCAGAACGGAAAGACAAGGAGATTCTGCTTAAGCAGGTGCAAGAATT
AGTCCTGCATCGTGACCCGGCTTTGCTGGACGAGGTGGTGCCGTTGCTGA
TAAGCGAGTTTCAAGCGGACCCTTTCCCTTCCATCCGCAAGTTCCTTATC
GAATTTTTGGAGGAGGTGGTTAAATCCCACCCAAGCTTCTGCCAGCCGGG
TATGGTAGATGTGTACGGCTTTGCTTTAATTCAAGAGGAATCCCCGGCGA
TCCTCAAAGGGTGTTGATTGCCGCCACGAATGTGCACCGATCGGTGCTGA
GGTATGCTGCGCAGTCGGGCCCTCACCCACATTTGGACTGATTACTGCCA
GCGTGTCAAAGACCCCATACTTGCCATGCGGGAGGCGAATGGCTGAAGTG
GGCGTGGCGCAGGGCGTAATAAAGTTCATGGAGGGTGTCATCCTGACGGG
CACTCCGCCTTCCCGCGCCTCCTCCTCCTCCTCCCGCCCCAACGACAGCT
TCACCATCGCTGATCTCCAAGGTCCTTTTTTCGACGCCCAGACCCAAGCA
CTCTTCCACATCACCGAAATGCGCGAAGAAGCGGAGCAGCTGCTCTCCTC
CTCCCTCTTGGCATGGTTGGAGGGAGGGAAGGAGGAATTTAAGCCACCGC
AATGGTCCTTCCTGATCAACACCCTATCAGCAATCGCCACCCACCGCTTG
CAATACCTCCCTCTCGTCGCTGCCTCCTTCGGTCGCCTCCTCGTCCTCCG
TTTCTCACGGGAGGACGGGGGAGAGGGCGGGAAGGAGGGAGGGGTGCCTC
TTCACGTGAAGACTCCTGCGGTGACTCAAGTCTTGAAATCATCGGCTCTC
AAACTCGCTCGTCTGCCAGGTGCGCGCGTGCATCCGTCGGCGCTCGAGGC
GCTGGGCCAGGGGCTGCGGGAGGCAGGGATGGAGAACGAGATGAAGGGCC
TCAATCTCCCCTTTCCTCGCCCCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|631389 >mRNA_6201-protein ID=mRNA_6201-protein|Name=jgi.p|Nanoce1779_2|631389|organism=Nannochloropsis oceanica|type=polypeptide|length=196bp
MAEVGVAQGVIKFMEGVILTGTPPSRASSSSSRPNDSFTIADLQGPFFDA
QTQALFHITEMREEAEQLLSSSLLAWLEGGKEEFKPPQWSFLINTLSAIA
THRLQYLPLVAASFGRLLVLRFSREDGGEGGKEGGVPLHVKTPAVTQVLK
SSALKLARLPGARVHPSALEALGQGLREAGMENEMKGLNLPFPRPP back to topmRNA from alignment at scaffold_14:790044..792991- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6201 ID=mRNA_6201|Name=jgi.p|Nanoce1779_2|631389|organism=Nannochloropsis oceanica|type=mRNA|length=2948bp|location=Sequence derived from alignment at scaffold_14:790044..792991- (Nannochloropsis oceanica)
ACAGGCGGAAAGATGGAGCCCTCTCACATGGATATAGCGCCGATGATGGT
AGACGACGACGATGAGGATGATATACTCCCAGCCGCCTCCCTCGCTCCAG
CAACGACTCTCCTCCGAGAGCAGGCCCTCGGGCTACTGAGTGACGCGCAG
ACGGCAGAACGGAAAGACAAGGAGATTCTGCTTAAGCAGGTGAGGAAGAA
CGGGAAGTAGGAGGGAAGGGGTGGTTTGCTCGTCGGTGGGAAGTGCTTAC
CAGGGACAAATGGAGGAATACGAAAAACATGAGGAAGCGAGAGAGAGAGA
GAGCGAGGGGTAGCAGGTGAACACTTGCTAAAACCATCGCTATACTGTGC
ACATCGGACACAGGTGCAAGAATTAGTCCTGCATCGTGACCCGGCTTTGC
TGGACGAGGTGGTGCCGTTGCTGATAAGCGAGTTTCAAGTAAGCAGGGGA
AAGGAGGGTGGGCTGGCAGGGGGGTGTGAAGGACGAAGACACAGTTGTAC
AGTGGACGAGCGCGATATAATCATCATACTCCATTCTTTTTATTATCTGT
CTGTCTTATTGTTAAGCACAACTTTCACCGGGCGCTTCTCTCCCTCCCTC
CTTCCCTTCCTCCGTCAGGCGGACCCTTTCCCTTCCATCCGCAAGTTCCT
TATCGAATTTTTGGAGGAGGTGGTTAAATCCCACCCAAGCTTCTGCCAGC
CGGGTATGGTAGATGTGTACGGCTTTGCTTTAATTCAAGAGGAATCCCCG
GCGATCCTCAAAGGGTGTTGATTGCCGCCACGAATGTGCACCGATCGGTG
CTGAGGTAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGGGAGGGAGGGAGG
GAGGGAGGGACGTTGGCGCGGTGTAGAGATGGTGCTCATCTATCCCTCCC
TTCCTATCCCCTTCTCCTCCCTCCCTCCTTTCCTTCTTAGTCATGGGCTC
TCCTCTGTCGGGCCTGACTGACATTTGGACTGATCGCTGCCAGCGTGTCA
AAGACCATTCATATCGCTCATTCATTCACCCCCTTTTCCTCCCTTCCTCC
CTCCCTCCCTCCCTCCCTCCCTTCCTAGGTATGCTGCGCAGTCGGGCCCT
CACCCACATTTGGACTGATTACTGCCAGCGTGTCAAAGACCCCATACTTG
CCATGCGGGAGGCGAATGGCTGAAGTGGGCGTGGCGCAGGTACGTCCTCC
CTCCCTCCCTCCCTCCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCT
CCCTCCCTCCCTCCCTCCCTCTCCTCTGTCATTCCCCCTCCCTCCCCCTC
CCTCCTCCCTCCCTTCCCTCCCTCCCTCCCTCATGTCATTCCCCCATTCG
CCATTCCTTTCTGCGAGCATAGACACACCAATCATCTTACCGTCCGTCCC
CTCCCCCCCTCCCTCTAGGGCGTAATAAAGTTCATGGAGGGTGTCATCCT
GACGGGCACTCCGCCTTCCCGCGCCTCCTCCTCCTCCTCCCGCCCCAACG
ACAGCTTCACCATCGCTGATCTCCAAGGTCCTTTTTTCGACGCCCAGGTC
CGCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTGCCTGTCTGTCTGTCTT
TCTTTCTGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCTCTGCCTGTCTGTCTGTCTTTCTTCTCT
GCCTGTTAATTTCCCCTTGACACAATGCTAACCTTTCCCTCCTTCCCTCC
CTCCCTAGACCCAAGCACTCTTCCACATCACCGAAATGCGCGAAGAAGCG
GAGCAGCTGCTCTCCTCCTCCCTCTTGGCATGGTTGGAGGGAGGGAAGGA
GGAATTTAAGCCACCGCAATGGTCCTTCCTGATCAACACCCTATCAGGTA
GGGAGGAGGGAGGGAGAGGAGGAGGGAGGGAGGAAGGGAGGAGGGAGGAA
AGGGTGCCCCCCAAAATCGGCTCCATCCACACCACACATACATTCCCGCC
CGCCCTCCCTCCCTCTCTCTCCCCTCCCTCCCTCCCTCCCTTCTTCTTTT
AGCAATCGCCACCCACCGCTTGCAATACCTCCCTCTCGTCGCTGCCTCCT
TCGGTCGCCTCCTCGTCCTCCGTTTCTCACGGGAGGACGGGGGAGAGGGC
GGGAAGGAGGGAGGGGTGCCTCTTCACGTGAAGACTCCTGCGGTGACTCA
AGTCTTGAAATCATCGGCTCTCAAACTCGCTCGTCTGCCAGGTACCCCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCCCCCCTCCTTCCCTCCCTCCCTCCCTCCTCCTCCCTCCCTCCCCCCTC
CCTCCCTCCCTCCCTCCTCCCTCCCTCCCTCCCTCTCCTCTCCCTCCCTC
CCTCCCTCCTCCTCCTCTCCTCCCTCCCTCCTCCTCCCTCTCCCGCCCTC
CTCCTCCCTCCCTCCTCCTCCCTCCCTCCCTCCCCCCTCCCTCCCTCCCT
CCTCCTCCTTCCCTCTCCCTCCCTCCCTCCCTCCCCGCCCTCTTGTCCGT
GGATTTGTCTACATACAATTCCATGCTTCCCTCCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCTTCCCAGGTGCGCGCGTGCATCCGTCGGC
GCTCGAGGCGCTGGGCCAGGGGCTGCGGGAGGCAGGGATGGAGAACGAGA
TGAAGGGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGTGTCAGGCCTT
TAAAGGGGAATGGCATCAAAGCTGGAGAGGGAGGGAAGGAGGGAAGGAGT
GAGGGAGGGAGGGGGAAGAGGGAGGAGAGTCAAAACGGGAGCCTTTGCCC
GTGAAGACAACGAGCGGACTAACTTAACACCCTTCCTCCCTCCCTCCCTT
CCTCCCTCCCTCCCGTCAGGCCTCAATCTCCCCTTTCCTCGCCCCCCC back to topCoding sequence (CDS) from alignment at scaffold_14:790044..792991- >mRNA_6201 ID=mRNA_6201|Name=jgi.p|Nanoce1779_2|631389|organism=Nannochloropsis oceanica|type=CDS|length=3528bp|location=Sequence derived from alignment at scaffold_14:790044..792991- (Nannochloropsis oceanica)
GCCTCAATCTCCCCTTTCCTCGCCCCCCCGTGCGCGCGTGCATCCGTCGG
CGCTCGAGGCGCTGGGCCAGGGGCTGCGGGAGGCAGGGATGGAGAACGAG
ATGAAGGCAATCGCCACCCACCGCTTGCAATACCTCCCTCTCGTCGCTGC
CTCCTTCGGTCGCCTCCTCGTCCTCCGTTTCTCACGGGAGGACGGGGGAG
AGGGCGGGAAGGAGGGAGGGGTGCCTCTTCACGTGAAGACTCCTGCGGTG
ACTCAAGTCTTGAAATCATCGGCTCTCAAACTCGCTCGTCTGCCAGACCC
AAGCACTCTTCCACATCACCGAAATGCGCGAAGAAGCGGAGCAGCTGCTC
TCCTCCTCCCTCTTGGCATGGTTGGAGGGAGGGAAGGAGGAATTTAAGCC
ACCGCAATGGTCCTTCCTGATCAACACCCTATCAGGGCGTAATAAAGTTC
ATGGAGGGTGTCATCCTGACGGGCACTCCGCCTTCCCGCGCCTCCTCCTC
CTCCTCCCGCCCCAACGACAGCTTCACCATCGCTGATCTCCAAGGTCCTT
TTTTCGACGCCCAGATGGCTGAAGTGGGCGTGGCGCAGGCCTCAATCTCC
CCTTTCCTCGCCCCCCCGTGCGCGCGTGCATCCGTCGGCGCTCGAGGCGC
TGGGCCAGGGGCTGCGGGAGGCAGGGATGGAGAACGAGATGAAGGCAATC
GCCACCCACCGCTTGCAATACCTCCCTCTCGTCGCTGCCTCCTTCGGTCG
CCTCCTCGTCCTCCGTTTCTCACGGGAGGACGGGGGAGAGGGCGGGAAGG
AGGGAGGGGTGCCTCTTCACGTGAAGACTCCTGCGGTGACTCAAGTCTTG
AAATCATCGGCTCTCAAACTCGCTCGTCTGCCAGACCCAAGCACTCTTCC
ACATCACCGAAATGCGCGAAGAAGCGGAGCAGCTGCTCTCCTCCTCCCTC
TTGGCATGGTTGGAGGGAGGGAAGGAGGAATTTAAGCCACCGCAATGGTC
CTTCCTGATCAACACCCTATCAGGGCGTAATAAAGTTCATGGAGGGTGTC
ATCCTGACGGGCACTCCGCCTTCCCGCGCCTCCTCCTCCTCCTCCCGCCC
CAACGACAGCTTCACCATCGCTGATCTCCAAGGTCCTTTTTTCGACGCCC
AGATGGCTGAAGTGGGCGTGGCGCAGGCCTCAATCTCCCCTTTCCTCGCC
CCCCCGTGCGCGCGTGCATCCGTCGGCGCTCGAGGCGCTGGGCCAGGGGC
TGCGGGAGGCAGGGATGGAGAACGAGATGAAGGCAATCGCCACCCACCGC
TTGCAATACCTCCCTCTCGTCGCTGCCTCCTTCGGTCGCCTCCTCGTCCT
CCGTTTCTCACGGGAGGACGGGGGAGAGGGCGGGAAGGAGGGAGGGGTGC
CTCTTCACGTGAAGACTCCTGCGGTGACTCAAGTCTTGAAATCATCGGCT
CTCAAACTCGCTCGTCTGCCAGACCCAAGCACTCTTCCACATCACCGAAA
TGCGCGAAGAAGCGGAGCAGCTGCTCTCCTCCTCCCTCTTGGCATGGTTG
GAGGGAGGGAAGGAGGAATTTAAGCCACCGCAATGGTCCTTCCTGATCAA
CACCCTATCAGGGCGTAATAAAGTTCATGGAGGGTGTCATCCTGACGGGC
ACTCCGCCTTCCCGCGCCTCCTCCTCCTCCTCCCGCCCCAACGACAGCTT
CACCATCGCTGATCTCCAAGGTCCTTTTTTCGACGCCCAGATGGCTGAAG
TGGGCGTGGCGCAGGCCTCAATCTCCCCTTTCCTCGCCCCCCCGTGCGCG
CGTGCATCCGTCGGCGCTCGAGGCGCTGGGCCAGGGGCTGCGGGAGGCAG
GGATGGAGAACGAGATGAAGGCAATCGCCACCCACCGCTTGCAATACCTC
CCTCTCGTCGCTGCCTCCTTCGGTCGCCTCCTCGTCCTCCGTTTCTCACG
GGAGGACGGGGGAGAGGGCGGGAAGGAGGGAGGGGTGCCTCTTCACGTGA
AGACTCCTGCGGTGACTCAAGTCTTGAAATCATCGGCTCTCAAACTCGCT
CGTCTGCCAGACCCAAGCACTCTTCCACATCACCGAAATGCGCGAAGAAG
CGGAGCAGCTGCTCTCCTCCTCCCTCTTGGCATGGTTGGAGGGAGGGAAG
GAGGAATTTAAGCCACCGCAATGGTCCTTCCTGATCAACACCCTATCAGG
GCGTAATAAAGTTCATGGAGGGTGTCATCCTGACGGGCACTCCGCCTTCC
CGCGCCTCCTCCTCCTCCTCCCGCCCCAACGACAGCTTCACCATCGCTGA
TCTCCAAGGTCCTTTTTTCGACGCCCAGATGGCTGAAGTGGGCGTGGCGC
AGGCCTCAATCTCCCCTTTCCTCGCCCCCCCGTGCGCGCGTGCATCCGTC
GGCGCTCGAGGCGCTGGGCCAGGGGCTGCGGGAGGCAGGGATGGAGAACG
AGATGAAGGCAATCGCCACCCACCGCTTGCAATACCTCCCTCTCGTCGCT
GCCTCCTTCGGTCGCCTCCTCGTCCTCCGTTTCTCACGGGAGGACGGGGG
AGAGGGCGGGAAGGAGGGAGGGGTGCCTCTTCACGTGAAGACTCCTGCGG
TGACTCAAGTCTTGAAATCATCGGCTCTCAAACTCGCTCGTCTGCCAGAC
CCAAGCACTCTTCCACATCACCGAAATGCGCGAAGAAGCGGAGCAGCTGC
TCTCCTCCTCCCTCTTGGCATGGTTGGAGGGAGGGAAGGAGGAATTTAAG
CCACCGCAATGGTCCTTCCTGATCAACACCCTATCAGGGCGTAATAAAGT
TCATGGAGGGTGTCATCCTGACGGGCACTCCGCCTTCCCGCGCCTCCTCC
TCCTCCTCCCGCCCCAACGACAGCTTCACCATCGCTGATCTCCAAGGTCC
TTTTTTCGACGCCCAGATGGCTGAAGTGGGCGTGGCGCAGGCCTCAATCT
CCCCTTTCCTCGCCCCCCCGTGCGCGCGTGCATCCGTCGGCGCTCGAGGC
GCTGGGCCAGGGGCTGCGGGAGGCAGGGATGGAGAACGAGATGAAGGCAA
TCGCCACCCACCGCTTGCAATACCTCCCTCTCGTCGCTGCCTCCTTCGGT
CGCCTCCTCGTCCTCCGTTTCTCACGGGAGGACGGGGGAGAGGGCGGGAA
GGAGGGAGGGGTGCCTCTTCACGTGAAGACTCCTGCGGTGACTCAAGTCT
TGAAATCATCGGCTCTCAAACTCGCTCGTCTGCCAGACCCAAGCACTCTT
CCACATCACCGAAATGCGCGAAGAAGCGGAGCAGCTGCTCTCCTCCTCCC
TCTTGGCATGGTTGGAGGGAGGGAAGGAGGAATTTAAGCCACCGCAATGG
TCCTTCCTGATCAACACCCTATCAGGGCGTAATAAAGTTCATGGAGGGTG
TCATCCTGACGGGCACTCCGCCTTCCCGCGCCTCCTCCTCCTCCTCCCGC
CCCAACGACAGCTTCACCATCGCTGATCTCCAAGGTCCTTTTTTCGACGC
CCAGATGGCTGAAGTGGGCGTGGCGCAG back to top
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