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Properties
| Property Name | Value |
|---|
| TranscriptId | 594194 |
| Track | FilteredModels2 |
| ProteinId | 594108 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:784737..786692 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6200 ID=mRNA_6200|Name=jgi.p|Nanoce1779_2|594108|organism=Nannochloropsis oceanica|type=mRNA|length=984bp
AGGGAGGGAGAGTGTGTTGGCCAGGGTCGTTGAGGATGAGATGGAGGAAT
TCGTCAAGCACGTGATTGCGCCTCATGGAGCAGGGGCCTCGCTCTCCGCT
CTGGTGGGGGCTCCACCAGCTGCTTCCCCGCTCATCCTCCTCGTCCTCTC
TATCCTTGTGCCGGAAACTCGCACCCGCCCGCCCCCTCCCGAGGTGGTGG
TTGCCGCCAAGACCTTGAAGGAGATACGCGGCGGCGATGTTTCCTATCTC
CTCCCTGTCATCGGCGGCCTATCCAAAGAGGATTTCGAGGCCGCCCTCCC
CCCCCTCCTCGCCCAGGACCTAGTGGATGCCAAGTTGCTAAAGAGATTGA
TAATCCCCGCGGGCCCCCTGACAGCTGCTGAGGTCCTTGTCTCGCTCCAC
AACGTCGACCCAGAGGCAGCGGCAGCCTCCGTGGACTTATCTCTCAGAAA
GTACTTGGATACACTTCAACAATGCCTCAACATGAAGACGCTCTTCCCGC
AGACGGCCATGACCCTCGCCCTGGTCAAGATGGTGGAGGACAAGGACCGT
CCTGTCCCTTACGCCTATATGCGCAGCGTCATCCTAGCCATCCGCGCCTA
CCCTACCCTCAAGTCCATCGTCGCAGACAACATCGTACCGAAGCTCGTGG
AGCGTGAGATCTGGACCTCGCAGCCTCGGGTCTGGGAGGGACTCATCATT
CTGCCCAAGTACATTGGCACGCGGGAAGTCACCGATAAGATGAGTGGTGC
TCTCCTTGCAGTCCCTGCCTCCCTCCTTCAAGACCTCTTAAAGAAGAATC
CAGATTTTCGGGCGACGTTGGCAGCGCACGTCTCAAGGGGACGGAAGACG
GCAGGGCTGGACAATGCGAAGCGGAAGGTGTTGGGATTATGAGCGAGCAC
AGATAGGAGGAAATAAATAAAGAGAGGGAGTTGCGAAGGCGACAACATAA
AAGCACAAGTAAAAAGAAAAATATTGAGCTCAAC back to topprotein sequence of jgi.p|Nanoce1779_2|594108 >mRNA_6200-protein ID=mRNA_6200-protein|Name=jgi.p|Nanoce1779_2|594108|organism=Nannochloropsis oceanica|type=polypeptide|length=284bp
MEEFVKHVIAPHGAGASLSALVGAPPAASPLILLVLSILVPETRTRPPPP
EVVVAAKTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPLLAQDLVDAKLL
KRLIIPAGPLTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKT
LFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVP
KLVEREIWTSQPRVWEGLIILPKYIGTREVTDKMSGALLAVPASLLQDLL
KKNPDFRATLAAHVSRGRKTAGLDNAKRKVLGL* back to topmRNA from alignment at scaffold_14:784737..786692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6200 ID=mRNA_6200|Name=jgi.p|Nanoce1779_2|594108|organism=Nannochloropsis oceanica|type=mRNA|length=1956bp|location=Sequence derived from alignment at scaffold_14:784737..786692- (Nannochloropsis oceanica)
AGGGAGGGAGAGTGTGTTGGCCAGGGTCGTTGAGGATGAGATGGAGGAAT
TCGTCAAGCACGTGATTGCGGTGGGTAGGAGGGAGGGAGGGAGGGAGAGG
GAGGGAGGGAGGGAAGGAGGGAGGGGGAGGGATAAAAAGCTTCTTGTACC
GTTTCTTCTCCTGATTAGACTTGCTCACGTCTCGGCCAGTCATTTGCTTC
CTCCCACCTTCCCATCCTATTCCCTTCCCCTCCCTTCTTCCCTCCCTTTC
CAGCCTCATGGAGCAGGGGCCTCGCTCTCCGCTCTGGTGGGGGCTCCACC
AGCTGCTTCCCCGCTCATCCTCCTCGTCCTCTCTATCCTTGTGCCGGAAA
CTCGCACCCGCCCGCCCCCTCCCGAGGTGGTGGTTGCCGCCAAGACCTTG
AAGGAGATACGGTAGGAAGGGAGGGAAGTAGGGAGGGAGGACGGGAGGGA
AGGAGGAGAGAGAAACACAGACGACGATTTTGCAACGTTCGTTTTAAAAT
ATCACGGTTTCACTCACCGTCCTTCCTTCCTTCCCTGCCCCCCTCCCTAC
CTCTTACCCCCAGCGGCGGCGATGTTTCCTATCTCCTCCCTGTCATCGGC
GGCCTATCCAAAGAGGATTTCGAGGCCGCCCTCCCCCCCCTCCTCGCCCA
GGACCTAGTGGATGCCAAGTTGCTAAAGAGATTGATAAGTGAGTGTAGGG
AGGGGAAGGGAGGGGATAAGGGACAATGGGAGAGAGAAAAAAGAGAGGGG
CACAAATGCGACGATGGAAGAAAGAACGTACTGATTACACTGCCCCCTCC
CTTTTTCTTCTCTTCCCTCCCTCTTTCCCTCCCTCCTTCCCTCCCTCCTT
CCCTCCCTCACTCCCTCCCTCCTTCCCTCCCTCACTCCCTCCCTCACTCC
CTCTCTAGTCCCCGCGGGCCCCCTGACAGCTGCTGAGGTCCTTGTCTCGC
TCCACAACGTCGACCCAGAGGCAGCGGCAGCCTCCGTGGACTTATCTCTC
AGAAAGTACTTGGATACACTTCAACAATGCCTCAACATGAAGACGCTCTT
CCCGCAGACGGCCATGAGTGAGTGAAGTGAAAGGGAGGGAGAGAGGGAGG
TGGGGAGTCGCTACTCAGAAATGACTCAGGACTGTTCTCTCTCCGCTCCA
ACCTGTCATCGATCTTATTTTCCACGAATCATGCGCCTTTCCTACCCCTT
CTCCTACCCCTTCATCCTCCAGCCCTCGCCCTGGTCAAGATGGTGGAGGA
CAAGGACCGTCCTGTCCCTTACGCCTATATGCGCAGCGTCATCCTAGCCA
TCCGCGCCTACCCTACCCTCAAGTCCATCGTCGCAGACAACATCGTACCG
AAGCTCGTGGAGCGTGAGGTGGGTATTTAATGTGATCTTCACTCGCTCCT
TTCTCTTCTTTCCTTCCCCTCTCTCTCCCCCTTTGGCCAGTTCGCGCCCT
TTTTCCCCTTGTGGCGATCATCGCCAACACCATCACCCAGGAGCTCGTAC
AGTGAGAGACGAATGTATGGGTGCTACCATACTCTCTCTCCTTTTCGCTC
TCATCTCCTCCTTTCTCTTTCACATTATCATCCCTTTGACACCACTCCAT
CTAAATTCTCGCCGTCTTCCCTCTCGTTAGATCTGGACCTCGCAGCCTCG
GGTCTGGGAGGGACTCATCATTCTGCCCAAGTACATTGGCACGCGGGAAG
TCACCGATAAGATGAGTGGTGCTCTCCTTGCAGTCCCTGCCTCCCTCCTT
CAAGACCTCTTAAAGAAGAATCCAGATTTTCGGGCGACGTTGGCAGCGCA
CGTCTCAAGGGGACGGAAGACGGCAGGGCTGGACAATGCGAAGCGGAAGG
TGTTGGGATTATGAGCGAGCACAGATAGGAGGAAATAAATAAAGAGAGGG
AGTTGCGAAGGCGACAACATAAAAGCACAAGTAAAAAGAAAAATATTGAG
CTCAAC back to topCoding sequence (CDS) from alignment at scaffold_14:784737..786692- >mRNA_6200 ID=mRNA_6200|Name=jgi.p|Nanoce1779_2|594108|organism=Nannochloropsis oceanica|type=CDS|length=5112bp|location=Sequence derived from alignment at scaffold_14:784737..786692- (Nannochloropsis oceanica)
ATCTGGACCTCGCAGCCTCGGGTCTGGGAGGGACTCATCATTCTGCCCAA
GTACATTGGCACGCGGGAAGTCACCGATAAGATGAGTGGTGCTCTCCTTG
CAGTCCCTGCCTCCCTCCTTCAAGACCTCTTAAAGAAGAATCCAGATTTT
CGGGCGACGTTGGCAGCGCACGTCTCAAGGGGACGGAAGACGGCAGGGCT
GGACAATGCGAAGCGGAAGGTGTTGGGATTATGACCCTCGCCCTGGTCAA
GATGGTGGAGGACAAGGACCGTCCTGTCCCTTACGCCTATATGCGCAGCG
TCATCCTAGCCATCCGCGCCTACCCTACCCTCAAGTCCATCGTCGCAGAC
AACATCGTACCGAAGCTCGTGGAGCGTGAGTCCCCGCGGGCCCCCTGACA
GCTGCTGAGGTCCTTGTCTCGCTCCACAACGTCGACCCAGAGGCAGCGGC
AGCCTCCGTGGACTTATCTCTCAGAAAGTACTTGGATACACTTCAACAAT
GCCTCAACATGAAGACGCTCTTCCCGCAGACGGCCATGACGGCGGCGATG
TTTCCTATCTCCTCCCTGTCATCGGCGGCCTATCCAAAGAGGATTTCGAG
GCCGCCCTCCCCCCCCTCCTCGCCCAGGACCTAGTGGATGCCAAGTTGCT
AAAGAGATTGATAACCTCATGGAGCAGGGGCCTCGCTCTCCGCTCTGGTG
GGGGCTCCACCAGCTGCTTCCCCGCTCATCCTCCTCGTCCTCTCTATCCT
TGTGCCGGAAACTCGCACCCGCCCGCCCCCTCCCGAGGTGGTGGTTGCCG
CCAAGACCTTGAAGGAGATACGATGGAGGAATTCGTCAAGCACGTGATTG
CGATCTGGACCTCGCAGCCTCGGGTCTGGGAGGGACTCATCATTCTGCCC
AAGTACATTGGCACGCGGGAAGTCACCGATAAGATGAGTGGTGCTCTCCT
TGCAGTCCCTGCCTCCCTCCTTCAAGACCTCTTAAAGAAGAATCCAGATT
TTCGGGCGACGTTGGCAGCGCACGTCTCAAGGGGACGGAAGACGGCAGGG
CTGGACAATGCGAAGCGGAAGGTGTTGGGATTATGACCCTCGCCCTGGTC
AAGATGGTGGAGGACAAGGACCGTCCTGTCCCTTACGCCTATATGCGCAG
CGTCATCCTAGCCATCCGCGCCTACCCTACCCTCAAGTCCATCGTCGCAG
ACAACATCGTACCGAAGCTCGTGGAGCGTGAGTCCCCGCGGGCCCCCTGA
CAGCTGCTGAGGTCCTTGTCTCGCTCCACAACGTCGACCCAGAGGCAGCG
GCAGCCTCCGTGGACTTATCTCTCAGAAAGTACTTGGATACACTTCAACA
ATGCCTCAACATGAAGACGCTCTTCCCGCAGACGGCCATGACGGCGGCGA
TGTTTCCTATCTCCTCCCTGTCATCGGCGGCCTATCCAAAGAGGATTTCG
AGGCCGCCCTCCCCCCCCTCCTCGCCCAGGACCTAGTGGATGCCAAGTTG
CTAAAGAGATTGATAACCTCATGGAGCAGGGGCCTCGCTCTCCGCTCTGG
TGGGGGCTCCACCAGCTGCTTCCCCGCTCATCCTCCTCGTCCTCTCTATC
CTTGTGCCGGAAACTCGCACCCGCCCGCCCCCTCCCGAGGTGGTGGTTGC
CGCCAAGACCTTGAAGGAGATACGATGGAGGAATTCGTCAAGCACGTGAT
TGCGATCTGGACCTCGCAGCCTCGGGTCTGGGAGGGACTCATCATTCTGC
CCAAGTACATTGGCACGCGGGAAGTCACCGATAAGATGAGTGGTGCTCTC
CTTGCAGTCCCTGCCTCCCTCCTTCAAGACCTCTTAAAGAAGAATCCAGA
TTTTCGGGCGACGTTGGCAGCGCACGTCTCAAGGGGACGGAAGACGGCAG
GGCTGGACAATGCGAAGCGGAAGGTGTTGGGATTATGACCCTCGCCCTGG
TCAAGATGGTGGAGGACAAGGACCGTCCTGTCCCTTACGCCTATATGCGC
AGCGTCATCCTAGCCATCCGCGCCTACCCTACCCTCAAGTCCATCGTCGC
AGACAACATCGTACCGAAGCTCGTGGAGCGTGAGTCCCCGCGGGCCCCCT
GACAGCTGCTGAGGTCCTTGTCTCGCTCCACAACGTCGACCCAGAGGCAG
CGGCAGCCTCCGTGGACTTATCTCTCAGAAAGTACTTGGATACACTTCAA
CAATGCCTCAACATGAAGACGCTCTTCCCGCAGACGGCCATGACGGCGGC
GATGTTTCCTATCTCCTCCCTGTCATCGGCGGCCTATCCAAAGAGGATTT
CGAGGCCGCCCTCCCCCCCCTCCTCGCCCAGGACCTAGTGGATGCCAAGT
TGCTAAAGAGATTGATAACCTCATGGAGCAGGGGCCTCGCTCTCCGCTCT
GGTGGGGGCTCCACCAGCTGCTTCCCCGCTCATCCTCCTCGTCCTCTCTA
TCCTTGTGCCGGAAACTCGCACCCGCCCGCCCCCTCCCGAGGTGGTGGTT
GCCGCCAAGACCTTGAAGGAGATACGATGGAGGAATTCGTCAAGCACGTG
ATTGCGATCTGGACCTCGCAGCCTCGGGTCTGGGAGGGACTCATCATTCT
GCCCAAGTACATTGGCACGCGGGAAGTCACCGATAAGATGAGTGGTGCTC
TCCTTGCAGTCCCTGCCTCCCTCCTTCAAGACCTCTTAAAGAAGAATCCA
GATTTTCGGGCGACGTTGGCAGCGCACGTCTCAAGGGGACGGAAGACGGC
AGGGCTGGACAATGCGAAGCGGAAGGTGTTGGGATTATGACCCTCGCCCT
GGTCAAGATGGTGGAGGACAAGGACCGTCCTGTCCCTTACGCCTATATGC
GCAGCGTCATCCTAGCCATCCGCGCCTACCCTACCCTCAAGTCCATCGTC
GCAGACAACATCGTACCGAAGCTCGTGGAGCGTGAGTCCCCGCGGGCCCC
CTGACAGCTGCTGAGGTCCTTGTCTCGCTCCACAACGTCGACCCAGAGGC
AGCGGCAGCCTCCGTGGACTTATCTCTCAGAAAGTACTTGGATACACTTC
AACAATGCCTCAACATGAAGACGCTCTTCCCGCAGACGGCCATGACGGCG
GCGATGTTTCCTATCTCCTCCCTGTCATCGGCGGCCTATCCAAAGAGGAT
TTCGAGGCCGCCCTCCCCCCCCTCCTCGCCCAGGACCTAGTGGATGCCAA
GTTGCTAAAGAGATTGATAACCTCATGGAGCAGGGGCCTCGCTCTCCGCT
CTGGTGGGGGCTCCACCAGCTGCTTCCCCGCTCATCCTCCTCGTCCTCTC
TATCCTTGTGCCGGAAACTCGCACCCGCCCGCCCCCTCCCGAGGTGGTGG
TTGCCGCCAAGACCTTGAAGGAGATACGATGGAGGAATTCGTCAAGCACG
TGATTGCGATCTGGACCTCGCAGCCTCGGGTCTGGGAGGGACTCATCATT
CTGCCCAAGTACATTGGCACGCGGGAAGTCACCGATAAGATGAGTGGTGC
TCTCCTTGCAGTCCCTGCCTCCCTCCTTCAAGACCTCTTAAAGAAGAATC
CAGATTTTCGGGCGACGTTGGCAGCGCACGTCTCAAGGGGACGGAAGACG
GCAGGGCTGGACAATGCGAAGCGGAAGGTGTTGGGATTATGACCCTCGCC
CTGGTCAAGATGGTGGAGGACAAGGACCGTCCTGTCCCTTACGCCTATAT
GCGCAGCGTCATCCTAGCCATCCGCGCCTACCCTACCCTCAAGTCCATCG
TCGCAGACAACATCGTACCGAAGCTCGTGGAGCGTGAGTCCCCGCGGGCC
CCCTGACAGCTGCTGAGGTCCTTGTCTCGCTCCACAACGTCGACCCAGAG
GCAGCGGCAGCCTCCGTGGACTTATCTCTCAGAAAGTACTTGGATACACT
TCAACAATGCCTCAACATGAAGACGCTCTTCCCGCAGACGGCCATGACGG
CGGCGATGTTTCCTATCTCCTCCCTGTCATCGGCGGCCTATCCAAAGAGG
ATTTCGAGGCCGCCCTCCCCCCCCTCCTCGCCCAGGACCTAGTGGATGCC
AAGTTGCTAAAGAGATTGATAACCTCATGGAGCAGGGGCCTCGCTCTCCG
CTCTGGTGGGGGCTCCACCAGCTGCTTCCCCGCTCATCCTCCTCGTCCTC
TCTATCCTTGTGCCGGAAACTCGCACCCGCCCGCCCCCTCCCGAGGTGGT
GGTTGCCGCCAAGACCTTGAAGGAGATACGATGGAGGAATTCGTCAAGCA
CGTGATTGCGATCTGGACCTCGCAGCCTCGGGTCTGGGAGGGACTCATCA
TTCTGCCCAAGTACATTGGCACGCGGGAAGTCACCGATAAGATGAGTGGT
GCTCTCCTTGCAGTCCCTGCCTCCCTCCTTCAAGACCTCTTAAAGAAGAA
TCCAGATTTTCGGGCGACGTTGGCAGCGCACGTCTCAAGGGGACGGAAGA
CGGCAGGGCTGGACAATGCGAAGCGGAAGGTGTTGGGATTATGACCCTCG
CCCTGGTCAAGATGGTGGAGGACAAGGACCGTCCTGTCCCTTACGCCTAT
ATGCGCAGCGTCATCCTAGCCATCCGCGCCTACCCTACCCTCAAGTCCAT
CGTCGCAGACAACATCGTACCGAAGCTCGTGGAGCGTGAGTCCCCGCGGG
CCCCCTGACAGCTGCTGAGGTCCTTGTCTCGCTCCACAACGTCGACCCAG
AGGCAGCGGCAGCCTCCGTGGACTTATCTCTCAGAAAGTACTTGGATACA
CTTCAACAATGCCTCAACATGAAGACGCTCTTCCCGCAGACGGCCATGAC
GGCGGCGATGTTTCCTATCTCCTCCCTGTCATCGGCGGCCTATCCAAAGA
GGATTTCGAGGCCGCCCTCCCCCCCCTCCTCGCCCAGGACCTAGTGGATG
CCAAGTTGCTAAAGAGATTGATAACCTCATGGAGCAGGGGCCTCGCTCTC
CGCTCTGGTGGGGGCTCCACCAGCTGCTTCCCCGCTCATCCTCCTCGTCC
TCTCTATCCTTGTGCCGGAAACTCGCACCCGCCCGCCCCCTCCCGAGGTG
GTGGTTGCCGCCAAGACCTTGAAGGAGATACGATGGAGGAATTCGTCAAG
CACGTGATTGCG back to top
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