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Properties
| Property Name | Value |
|---|
| TranscriptId | 631460 |
| Track | FilteredModels2 |
| ProteinId | 631374 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:689089..692009 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6170 ID=mRNA_6170|Name=jgi.p|Nanoce1779_2|631374|organism=Nannochloropsis oceanica|type=mRNA|length=2462bp
GGGAGGGAGGGCATTGGGTGGATACTGTGGTGGGGGAATTAAGAGCATTC
TCCGAACAGTGTGTGCTCTTTCTGAGGCTCGATGTAGACTTCACCTGCTT
CTTCCACCTCCAGCAAATTTCTTCCTCCCTCTCTTCCTCCCTCCCTTCCT
CCTCCTCCACCACAACTCAAACGGCCTCCAGCTCCCTCCCCTCCTTCAAG
CCTGCTGTTCAAAGCCCAACTACCACTTCTCCCTCTCGCCCTCTCTCCTC
CTCAGCTCCTCCATCCTCCGGGAGCGCGGAGATCTTTCTGGCCCCCCTCA
CTCGCTTCCTCCTCTCCCTTGAGGACAGCGTCGTCAGCGTATCTCTCCCA
CCCTACTTTGCCATCGCCCTCTCCCACGCCCCCTTCCTCCTCCCCCGCCT
CCTCTCCCACGTGCTGCGCTTCCTCCCTCCCGCCCTCTCCTCCGTAGCGC
TGGAAAAACTGACGAGGGCGTTCCTCGCCTTGCAGCACACGGTCTCTCTT
TTGTTGGACGGGGTAGGGAGGGAGTGGGGGAAGAGGGTGGGGCTGACCCA
CACAAGGGCAGAGAAAGAGTTTCAGAGGCTGAGAATGATGCTGTCAGTAT
TGGAATTAAACGCGGAGGAGTACAAATTGTTTTTGAATCGAAATAAACAT
AATGCTCTGGTCATTGGCGGATGTAAGAATGGGGTGGATTTTACGAGGGA
GGAGTACCGGGCGCTGTGGATAGTGGGACCGGGGGGATGGGAGGAGGGGA
CGAGGGAGGAAATGCTGGCCAAGTTTCAGGCGATGTGGTTGGAGTAATGG
GGGGAGAATGCATGCGGCTCTGGGAAAGAAAGAGGATGAAGAGCGAAAGG
AAGAAATGGATGAAGAAGAGGACACGGCCTGTGCCATAAAGCCCCTGCGT
TTCGTTGGGCTCCTGGTTTTAGTTTTAGAGTCACTTCCATTATTACCAGA
CCGAGATTTAAAAATTCACGTAACCAAGTACACGCTCTTCCACACCGCCC
TTCACTCAATGTATTGAAAAGGAAGGAGGGTAAAAAAAAAAGGAGGGGAG
GTTAACTTTCCGATTTTGTTTCCCTCTACGGAACTTATTGACCATCACCC
CTTCTGCCGCATTCAGCCACCCACTTGACGAAAAGCGGACCTCTCATACC
CTTTCGCACCCTTCATTTATTTCCCAGCACCTCCACCCCCAGGCAGGCGG
AGCGAGCCAGTCATGGAGGAGGACCCTCAGCAAGAGGAGGAGGAGGAGGA
CGAGATGGCAGTCAAGTGTTCGGCGTGTGACCAACGACAGGATGCTTTGG
ACAACCTGAGTCGGAAACGCTTCAAGATCAACACGGCATGTGGGCACTAT
TTCTGTGACGCATGTATTCAACGCGAATTCGCGCGCAAGACCCGCGGGGC
ATTCCGTTGTCCAGCTTGTGCAAAAATGGGGCGCGATAGGGAGGTGTTAC
GACAGAGCCTGGAAACCAAGACGAGAGAGCAGCTCTTGGTGGAGATGGAC
ACCAAATGGCGGGAGAGAGTGCTGGAGGTGTACGGAAAGCGGGAGGAGGA
GTTTGGAGGGGACGAAGAGGCGTACAACGACTATGTGGAGAAGCGGGAGG
ACCTGATCTACACCCTGGCCAACCGCCTCTTTCTGGACGAGAACGAAGTC
AAGCAAGCCGAAACTCGCCTAGAGAACGAGCGGAAATTGAATGCCGCGGC
CGTGGCGAAATACAAGGCTCGCCGTGAAGAGGACCGTCGTCGCTCCGAGA
AAGCTGTGGAGAGCTACGACCGCCAATGGGCCGAGCAAGTCAAGCTCGCG
CAAGACAGGGAACGGAAGGAACAAGAGAGGAAGAGGGAGTTTAGACTACA
GGTGCAACAGAGAAATTTGGGGGAGCGAGATGCAGTGACGATTAAGCTGG
AGGAGCCCCTAGGACGTGGAGAGGAGAGGAGAGGGAAGGAAGAAGAGGAA
GAGGAAGACGATGAGGAGATACTGCGGGCATTGGATCGCGGAGGGAAGGG
AGGAGGGATGGAAGGAGGATGGGGAGGGATGAGCGGGGCCAGCGTCTTTC
ATACTAGCCTGCGAGTGTTGGTGGGAGATCAGCCCAAAATTGTGGAGGTG
GAGGGCGGGAGGGCGGGGGGAAGGGTGGGAGGGAGGGAGGCCGTGGCCAA
GGCGAGTGGGTGGCCCATATCGTTGAGGTACAAGCGGTGCTGGGAGGAGG
CAGTGGCGTCCTTGTTTGAGATGTCGACGGAGGCTAGAGGGCGGTTGGGA
AGGACTTTTTATAGGTAGGTAAGTAGGGAGGGAGAGAAGGGGGAAGGGCA
GGAAGGAGGAATGAATAGTTGGATGGAATGAGGGGCACAGGAGAGACACC
CATGGAGAGACAGACAGACATACTACTGACCTCCCTCGTTAGGCGATGCA
CAGATACGACAGCGATACAAGGAATGAATGACAACAGCAAGCGACCGACA
GGGCCAGGCAGC back to topprotein sequence of jgi.p|Nanoce1779_2|631374 >mRNA_6170-protein ID=mRNA_6170-protein|Name=jgi.p|Nanoce1779_2|631374|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp
MEEDPQQEEEEEDEMAVKCSACDQRQDALDNLSRKRFKINTACGHYFCDA
CIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREQLLVEMDTKWR
ERVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAE
TRLENERKLNAAAVAKYKARREEDRRRSEKAVESYDRQWAEQVKLAQDRE
RKEQERKREFRLQVQQRNLGERDAVTIKLEEPLGRGEERRGKEEEEEEDD
EEILRALDRGGKGGGMEGGWGGMSGASVFHTSLRVLVGDQPKIVEVEGGR
AGGRVGGREAVAKASGWPISLRYKRCWEEAVASLFEMSTEARGRLGRTFY
R* back to topmRNA from alignment at scaffold_14:689089..692009- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6170 ID=mRNA_6170|Name=jgi.p|Nanoce1779_2|631374|organism=Nannochloropsis oceanica|type=mRNA|length=2921bp|location=Sequence derived from alignment at scaffold_14:689089..692009- (Nannochloropsis oceanica)
GGGAGGGAGGGCATTGGGTGGATACTGTGGTGGGGGAATTAAGAGCATTC
TCCGAACAGTGTGTGCTCTTTCTGAGGCTCGATGTAGACTTCACCTGCTT
CTTCCACCTCCAGCAAATTTCTTCCTCCCTCTCTTCCTCCCTCCCTTCCT
CCTCCTCCACCACAACTCAAACGGCCTCCAGCTCCCTCCCCTCCTTCAAG
CCTGCTGTTCAAAGCCCAACTACCACTTCTCCCTCTCGCCCTCTCTCCTC
CTCAGCTCCTCCATCCTCCGGGAGCGCGGAGATCTTTCTGGCCCCCCTCA
CTCGCTTCCTCCTCTCCCTTGAGGACAGCGTCGTCAGCGTATCTCTCCCA
CCCTACTTTGCCATCGCCCTCTCCCACGCCCCCTTCCTCCTCCCCCGCCT
CCTCTCCCACGTGCTGCGCTTCCTCCCTCCCGCCCTCTCCTCCGTAGCGC
TGGAAAAACTGACGAGGGCGTTCCTCGCCTTGCAGCACACGGTCTCTCTT
TTGTTGGACGGGGTAGGGAGGGAGTGGGGGAAGAGGGTGGGGCTGACCCA
CACAAGGGCAGAGAAAGAGTTTCAGAGGCTGAGAATGATGCTGTCAGTAT
TGGAATTAAACGCGGAGGAGTACAAATTGTTTTTGAATCGAAATAAACAT
AATGCTCTGGTCATTGGCGGATGTAAGAATGGGGTGGATTTTACGAGGGA
GGAGTACCGGGCGCTGTGGATAGTGGGACCGGGGGGATGGGAGGAGGGGA
CGAGGGAGGAAATGCTGGCCAAGTTTCAGGCGATGTGGTTGGAGTAATGG
GGGGAGAATGCATGCGGCTCTGGGAAAGAAAGAGGATGAAGAGCGAAAGG
AAGAAATGGATGAAGAAGAGGACACGGCCTGTGCCATAAAGCCCCTGCGT
TTCGTTGGGCTCCTGGTTTTAGTTTTAGAGTCACTTCCATTATTACCAGA
CCGAGATTTAAAAATTCACGTAACCAAGTACACGCTCTTCCACACCGCCC
TTCACTCAATGTATTGAAAAGGAAGGAGGGTAAAAAAAAAAGGAGGGGAG
GTTAACTTTCCGATTTTGTTTCCCTCTACGGAACTTATTGACCATCACCC
CTTCTGCCGCATTCAGCCACCCACTTGACGAAAAGCGGACCTCTCATACC
CTTTCGCACCCTTCATTTATTTCCCAGCACCTCCACCCCCAGGCAGGCGG
AGCGAGCCAGTCATGGAGGAGGACCCTCAGCAAGAGGAGGAGGAGGAGGA
CGAGATGGCAGTCAAGTGTTCGGCGTGTGACCAACGACAGGATGCTTTGG
ACAACCTGAGTCGGAAACGCTTCAAGATCAACACGGCATGTGGGCACTAT
TTGTAAGTAGGGGGTGAGGGTCGAGTGCGGGTGGAGGGAGCTGTGAGTAA
GTCGAGCATGTGGGTGTCCTCTCGGGATGAGGTGACCTTGGCCCACTTAC
CCCTCCTTCCCTCCCTCCCTTCCTCCTTCATCTATATCCCAGCTGTGACG
CATGTATTCAACGCGAATTCGCGCGCAAGACCCGCGGGGCATTCCGTTGT
CCAGCTTGTGCAAAAATGGGGCGCGATAGGGAGGTGTTACGACAGAGCCT
GGAAACCAAGACGAGAGAGCAGCTCTTGGTGGAGATGGACACCAAATGGC
GGGAGAGAGTGCTGGAGGTGTACGGAAAGCGGGAGGAGGAGTTTGGAGGG
GACGAAGAGGCGTACAACGACTATGTGGAGAAGCGGGAGGACCTGAGTAA
GTGCTCCCCCTCCCCCCCTTCGGCCTTTCCTCTCTCCATTCCTTACCTTC
TCTCCTTCCCTCCCTCTTCCCCTCCTTCCAGTCTACACCCTGGCCAACCG
CCTCTTTCTGGACGAGAACGAAGTCAAGCAAGCCGAAACTCGCCTAGAGA
ACGAGCGGAAATTGAATGCCGCGGCCGTGGCGAAATACAAGGCTCGCCGT
GAAGGTACGTACGTTCGTATGTATGTCTGTAGGTAGGTGACTTAATTCCC
CACCCCCTTCCCCTCTTTAGTATCTGTGACCGTCCTTTCGCAGTATTTTA
CGTCAAAGAGAGAGTCAGTGCAGGCGCGAGAAGGCTGCTCGAGCTATTTC
GCCAGACGCGATCACTCACATCCCGCCCTCCTTCCATTCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCAACTCAGAGGACCGTCGTC
GCTCCGAGAAAGCTGTGGAGAGCTACGACCGCCAATGGGCCGAGCAAGTC
AAGCTCGCGCAAGACAGGGAACGGAAGGAACAAGAGAGGAAGAGGGAGTT
TAGACTACAGGTGCAACAGAGAAATTTGGGGGAGCGAGATGCAGTGACGA
TTAAGCTGGAGGAGCCCCTAGGACGTGGAGAGGAGAGGAGAGGGAAGGAA
GAAGAGGAAGAGGAAGACGATGAGGAGATACTGCGGGCATTGGATCGCGG
AGGGAAGGGAGGAGGGATGGAAGGAGGATGGGGAGGGATGAGCGGGGCCA
GCGTCTTTCATACTAGCCTGCGAGTGTTGGTGGGAGATCAGCCCAAAATT
GTGGAGGTGGAGGGCGGGAGGGCGGGGGGAAGGGTGGGAGGGAGGGAGGC
CGTGGCCAAGGCGAGTGGGTGGCCCATATCGTTGAGGTACAAGCGGTGCT
GGGAGGAGGCAGTGGCGTCCTTGTTTGAGATGTCGACGGAGGCTAGAGGG
CGGTTGGGAAGGACTTTTTATAGGTAGGTAAGTAGGGAGGGAGAGAAGGG
GGAAGGGCAGGAAGGAGGAATGAATAGTTGGATGGAATGAGGGGCACAGG
AGAGACACCCATGGAGAGACAGACAGACATACTACTGACCTCCCTCGTTA
GGCGATGCACAGATACGACAGCGATACAAGGAATGAATGACAACAGCAAG
CGACCGACAGGGCCAGGCAGC back to topCoding sequence (CDS) from alignment at scaffold_14:689089..692009- >mRNA_6170 ID=mRNA_6170|Name=jgi.p|Nanoce1779_2|631374|organism=Nannochloropsis oceanica|type=CDS|length=4224bp|location=Sequence derived from alignment at scaffold_14:689089..692009- (Nannochloropsis oceanica)
AGGACCGTCGTCGCTCCGAGAAAGCTGTGGAGAGCTACGACCGCCAATGG
GCCGAGCAAGTCAAGCTCGCGCAAGACAGGGAACGGAAGGAACAAGAGAG
GAAGAGGGAGTTTAGACTACAGGTGCAACAGAGAAATTTGGGGGAGCGAG
ATGCAGTGACGATTAAGCTGGAGGAGCCCCTAGGACGTGGAGAGGAGAGG
AGAGGGAAGGAAGAAGAGGAAGAGGAAGACGATGAGGAGATACTGCGGGC
ATTGGATCGCGGAGGGAAGGGAGGAGGGATGGAAGGAGGATGGGGAGGGA
TGAGCGGGGCCAGCGTCTTTCATACTAGCCTGCGAGTGTTGGTGGGAGAT
CAGCCCAAAATTGTGGAGGTGGAGGGCGGGAGGGCGGGGGGAAGGGTGGG
AGGGAGGGAGGCCGTGGCCAAGGCGAGTGGGTGGCCCATATCGTTGAGGT
ACAAGCGGTGCTGGGAGGAGGCAGTGGCGTCCTTGTTTGAGATGTCGACG
GAGGCTAGAGGGCGGTTGGGAAGGACTTTTTATAGGTAGTCTACACCCTG
GCCAACCGCCTCTTTCTGGACGAGAACGAAGTCAAGCAAGCCGAAACTCG
CCTAGAGAACGAGCGGAAATTGAATGCCGCGGCCGTGGCGAAATACAAGG
CTCGCCGTGAAGCTGTGACGCATGTATTCAACGCGAATTCGCGCGCAAGA
CCCGCGGGGCATTCCGTTGTCCAGCTTGTGCAAAAATGGGGCGCGATAGG
GAGGTGTTACGACAGAGCCTGGAAACCAAGACGAGAGAGCAGCTCTTGGT
GGAGATGGACACCAAATGGCGGGAGAGAGTGCTGGAGGTGTACGGAAAGC
GGGAGGAGGAGTTTGGAGGGGACGAAGAGGCGTACAACGACTATGTGGAG
AAGCGGGAGGACCTGAATGGAGGAGGACCCTCAGCAAGAGGAGGAGGAGG
AGGACGAGATGGCAGTCAAGTGTTCGGCGTGTGACCAACGACAGGATGCT
TTGGACAACCTGAGTCGGAAACGCTTCAAGATCAACACGGCATGTGGGCA
CTATTTAGGACCGTCGTCGCTCCGAGAAAGCTGTGGAGAGCTACGACCGC
CAATGGGCCGAGCAAGTCAAGCTCGCGCAAGACAGGGAACGGAAGGAACA
AGAGAGGAAGAGGGAGTTTAGACTACAGGTGCAACAGAGAAATTTGGGGG
AGCGAGATGCAGTGACGATTAAGCTGGAGGAGCCCCTAGGACGTGGAGAG
GAGAGGAGAGGGAAGGAAGAAGAGGAAGAGGAAGACGATGAGGAGATACT
GCGGGCATTGGATCGCGGAGGGAAGGGAGGAGGGATGGAAGGAGGATGGG
GAGGGATGAGCGGGGCCAGCGTCTTTCATACTAGCCTGCGAGTGTTGGTG
GGAGATCAGCCCAAAATTGTGGAGGTGGAGGGCGGGAGGGCGGGGGGAAG
GGTGGGAGGGAGGGAGGCCGTGGCCAAGGCGAGTGGGTGGCCCATATCGT
TGAGGTACAAGCGGTGCTGGGAGGAGGCAGTGGCGTCCTTGTTTGAGATG
TCGACGGAGGCTAGAGGGCGGTTGGGAAGGACTTTTTATAGGTAGTCTAC
ACCCTGGCCAACCGCCTCTTTCTGGACGAGAACGAAGTCAAGCAAGCCGA
AACTCGCCTAGAGAACGAGCGGAAATTGAATGCCGCGGCCGTGGCGAAAT
ACAAGGCTCGCCGTGAAGCTGTGACGCATGTATTCAACGCGAATTCGCGC
GCAAGACCCGCGGGGCATTCCGTTGTCCAGCTTGTGCAAAAATGGGGCGC
GATAGGGAGGTGTTACGACAGAGCCTGGAAACCAAGACGAGAGAGCAGCT
CTTGGTGGAGATGGACACCAAATGGCGGGAGAGAGTGCTGGAGGTGTACG
GAAAGCGGGAGGAGGAGTTTGGAGGGGACGAAGAGGCGTACAACGACTAT
GTGGAGAAGCGGGAGGACCTGAATGGAGGAGGACCCTCAGCAAGAGGAGG
AGGAGGAGGACGAGATGGCAGTCAAGTGTTCGGCGTGTGACCAACGACAG
GATGCTTTGGACAACCTGAGTCGGAAACGCTTCAAGATCAACACGGCATG
TGGGCACTATTTAGGACCGTCGTCGCTCCGAGAAAGCTGTGGAGAGCTAC
GACCGCCAATGGGCCGAGCAAGTCAAGCTCGCGCAAGACAGGGAACGGAA
GGAACAAGAGAGGAAGAGGGAGTTTAGACTACAGGTGCAACAGAGAAATT
TGGGGGAGCGAGATGCAGTGACGATTAAGCTGGAGGAGCCCCTAGGACGT
GGAGAGGAGAGGAGAGGGAAGGAAGAAGAGGAAGAGGAAGACGATGAGGA
GATACTGCGGGCATTGGATCGCGGAGGGAAGGGAGGAGGGATGGAAGGAG
GATGGGGAGGGATGAGCGGGGCCAGCGTCTTTCATACTAGCCTGCGAGTG
TTGGTGGGAGATCAGCCCAAAATTGTGGAGGTGGAGGGCGGGAGGGCGGG
GGGAAGGGTGGGAGGGAGGGAGGCCGTGGCCAAGGCGAGTGGGTGGCCCA
TATCGTTGAGGTACAAGCGGTGCTGGGAGGAGGCAGTGGCGTCCTTGTTT
GAGATGTCGACGGAGGCTAGAGGGCGGTTGGGAAGGACTTTTTATAGGTA
GTCTACACCCTGGCCAACCGCCTCTTTCTGGACGAGAACGAAGTCAAGCA
AGCCGAAACTCGCCTAGAGAACGAGCGGAAATTGAATGCCGCGGCCGTGG
CGAAATACAAGGCTCGCCGTGAAGCTGTGACGCATGTATTCAACGCGAAT
TCGCGCGCAAGACCCGCGGGGCATTCCGTTGTCCAGCTTGTGCAAAAATG
GGGCGCGATAGGGAGGTGTTACGACAGAGCCTGGAAACCAAGACGAGAGA
GCAGCTCTTGGTGGAGATGGACACCAAATGGCGGGAGAGAGTGCTGGAGG
TGTACGGAAAGCGGGAGGAGGAGTTTGGAGGGGACGAAGAGGCGTACAAC
GACTATGTGGAGAAGCGGGAGGACCTGAATGGAGGAGGACCCTCAGCAAG
AGGAGGAGGAGGAGGACGAGATGGCAGTCAAGTGTTCGGCGTGTGACCAA
CGACAGGATGCTTTGGACAACCTGAGTCGGAAACGCTTCAAGATCAACAC
GGCATGTGGGCACTATTTAGGACCGTCGTCGCTCCGAGAAAGCTGTGGAG
AGCTACGACCGCCAATGGGCCGAGCAAGTCAAGCTCGCGCAAGACAGGGA
ACGGAAGGAACAAGAGAGGAAGAGGGAGTTTAGACTACAGGTGCAACAGA
GAAATTTGGGGGAGCGAGATGCAGTGACGATTAAGCTGGAGGAGCCCCTA
GGACGTGGAGAGGAGAGGAGAGGGAAGGAAGAAGAGGAAGAGGAAGACGA
TGAGGAGATACTGCGGGCATTGGATCGCGGAGGGAAGGGAGGAGGGATGG
AAGGAGGATGGGGAGGGATGAGCGGGGCCAGCGTCTTTCATACTAGCCTG
CGAGTGTTGGTGGGAGATCAGCCCAAAATTGTGGAGGTGGAGGGCGGGAG
GGCGGGGGGAAGGGTGGGAGGGAGGGAGGCCGTGGCCAAGGCGAGTGGGT
GGCCCATATCGTTGAGGTACAAGCGGTGCTGGGAGGAGGCAGTGGCGTCC
TTGTTTGAGATGTCGACGGAGGCTAGAGGGCGGTTGGGAAGGACTTTTTA
TAGGTAGTCTACACCCTGGCCAACCGCCTCTTTCTGGACGAGAACGAAGT
CAAGCAAGCCGAAACTCGCCTAGAGAACGAGCGGAAATTGAATGCCGCGG
CCGTGGCGAAATACAAGGCTCGCCGTGAAGCTGTGACGCATGTATTCAAC
GCGAATTCGCGCGCAAGACCCGCGGGGCATTCCGTTGTCCAGCTTGTGCA
AAAATGGGGCGCGATAGGGAGGTGTTACGACAGAGCCTGGAAACCAAGAC
GAGAGAGCAGCTCTTGGTGGAGATGGACACCAAATGGCGGGAGAGAGTGC
TGGAGGTGTACGGAAAGCGGGAGGAGGAGTTTGGAGGGGACGAAGAGGCG
TACAACGACTATGTGGAGAAGCGGGAGGACCTGAATGGAGGAGGACCCTC
AGCAAGAGGAGGAGGAGGAGGACGAGATGGCAGTCAAGTGTTCGGCGTGT
GACCAACGACAGGATGCTTTGGACAACCTGAGTCGGAAACGCTTCAAGAT
CAACACGGCATGTGGGCACTATTT back to top
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