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Properties
| Property Name | Value |
|---|
| TranscriptId | 594027 |
| Track | FilteredModels2 |
| ProteinId | 593941 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:651526..654151 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6155 ID=mRNA_6155|Name=jgi.p|Nanoce1779_2|593941|organism=Nannochloropsis oceanica|type=mRNA|length=1950bp
ACAGCGAAAAAATGCGTCTGTCCCTCACCCTCGGGGCCTTGATGGCCTCC
AGCGCGGTGGCGTTCGTGCCCCCCATGCCCGCCTCCCGTACCCGGGCGAC
GAAGCTGGCCTCCTCCCTCATCCCCGACAACGTCCGCAAGACCCTGACCG
GCGACCAGCTCAAGACCCTCGAGGCCGCCGCCGAGAAGGCCACCAAGGCC
GCCGCCGCCGACCTTGACCCCTGGTTTGGGGAGGCGGAGGCGGACGACTC
GTCTTTCGCTCCCTTCTCCGCCCTCGAGTCCATGACCGGCAAGCCCGCCC
CGGTGCCCAGTGCCAGCGGCGCCCAGGACTTCCTGGAGGCGAACCCGTAC
TACGACCAGACCAACATCCCACTCAACACGTACAAGAACAAGGAGCCACA
CACCGGCAAGATCGTGTCCGTTAAGAGGATGGTGGGCCCCAAGGCCACCG
GCGAGACGTGCCACATCATCATCGACCACGGGGGCGCCATGCCCTTCTGG
GAGGGCCAGTCCTACGGCGTGGTGCCCCCCGGGATCAACCCCAAGAACGG
TAAGCCCAACAACGTCCGCCTCTACTCCATCGCCTCCACCCGCTACGGCG
ACGACATGAAGGGCCAGACCGCCTCCCTTTGTGTCCGTAGGGCCACGTAC
TGGTGCCCCGAGCTCAAGGCCGAGGACCCTGCCAAGAAGGGCATCTGCTC
CAACTTCCTCTGTGACGCCAAGCCTGGCGACAAGATCGCCCTGGCCGGCC
CCACGGGCAAGGTAATGCTCATCCCCGAGAAGACCCCCGAGGCCGACATC
ATCATGATCGCCACGGGCACGGGCATCGCGCCCTACCGCACCTTTGTGCG
CCGCCTGTTCGTGGAGGACACCCCGGCGCGCAAGGCCTTCAAAGGCCTGG
CTTGGCTCTTCTTGGGCGTGGCTAACACGGACTCGCTGCTCTATGACGAG
GAGTGGCAGGCGGTGAAGAAGGAGTACCCCAACAACTTCCGCGTGGACTA
CGCGCTCTCCCGCGAGCAGGAGAACAAGAAGGGCGGCAAGATGTATATCC
AGGACAAGATGGAGGAGTACGCCGACGAAATTTTCGACCGCCTGTCCAAG
GGCGGGCACATCTACTTCTGTGGCCTCAAGGGCATGATGCCCGGCATCCA
AGAGACCCTCGAGAGGGTGGCGGGCGAGAAGGGGATTGACTGGAAGGAGA
TGCTCGACGGGTTGAAGAAGAACCACCAGTGGCACGTTGAGGTGTACTAA
GCGTATCTCTGTCCATTCGTCCTCCTCCTACCCTCCGTTGCTTGTGGTGG
AAGGATGGGGGGTGATTAGTGCTGTGTGGAGGCAGGAGGGGGAGAGCAGG
AGGAAGGGAGGGTGGGCGGTGTGATAGCATAGTAGTGTGCCTTGTGGCCG
TCTTGACCACCTGTTCTCTTTTTCTGAGTTTAAGAGCTGGGGGAAGGGGG
GAATGAGCGGTGCCGGTGTTGGATGAGAAGGCAAGCAGGTTTGAAAGAAA
AGAAAAACAACAAAAACAACAAGAACAACATAACAATAACGCGCGCGGCC
CCCGGCGTGTCAATTATTTCATGTCTGATGCCGCCCAGCGGTGCCCTGTC
TATGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGCTAATAGTAGTGG
TAGGGGAGAGAAGATGAAATCAGAGCGATTTCGGGATTTGGAAGGCGCCC
TTAGTGTGAGAAAAACAGTGAGGGAGAAAGACATGAAAGGAATGGAGGGA
GGGCCTGCTTGGACTTTTTTGGTAGTCCTTATCAGGTGAGCAAGGGTGAT
TGTAGAGATCAGGTCCTTGGATTTCTTTGTCCGAATGAAGGGATAAGAGA
CGAAGGAGAAGGAGGGCGAGGAGGAGGAGGAGGAGGAGGTTATAATTCCT
ACTAAAGCCTTGTCCTTCACGGTACCATGGACTACCCGGCAATAACCAAC back to topprotein sequence of jgi.p|Nanoce1779_2|593941 >mRNA_6155-protein ID=mRNA_6155-protein|Name=jgi.p|Nanoce1779_2|593941|organism=Nannochloropsis oceanica|type=polypeptide|length=413bp
MRLSLTLGALMASSAVAFVPPMPASRTRATKLASSLIPDNVRKTLTGDQL
KTLEAAAEKATKAAAADLDPWFGEAEADDSSFAPFSALESMTGKPAPVPS
ASGAQDFLEANPYYDQTNIPLNTYKNKEPHTGKIVSVKRMVGPKATGETC
HIIIDHGGAMPFWEGQSYGVVPPGINPKNGKPNNVRLYSIASTRYGDDMK
GQTASLCVRRATYWCPELKAEDPAKKGICSNFLCDAKPGDKIALAGPTGK
VMLIPEKTPEADIIMIATGTGIAPYRTFVRRLFVEDTPARKAFKGLAWLF
LGVANTDSLLYDEEWQAVKKEYPNNFRVDYALSREQENKKGGKMYIQDKM
EEYADEIFDRLSKGGHIYFCGLKGMMPGIQETLERVAGEKGIDWKEMLDG
LKKNHQWHVEVY* back to topmRNA from alignment at scaffold_14:651526..654151- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6155 ID=mRNA_6155|Name=jgi.p|Nanoce1779_2|593941|organism=Nannochloropsis oceanica|type=mRNA|length=2626bp|location=Sequence derived from alignment at scaffold_14:651526..654151- (Nannochloropsis oceanica)
ACAGCGAAAAAATGCGTCTGTCCCTCACCCTCGGGGCCTTGATGGCCTCC
AGCGCGGTGGCGTTCGTGCCCCCCATGCCCGCCTCCCGTACCCGGGCGAC
GAAGCTGGTACGTAAATTGCCTGCCTTTCCTTCTGTCTGTGTTCTGTGTA
TGTCTGTCTGGCGGGTCGTTTGTGCAATACTAAAATGACTGTCGACGGTA
GGCTCTTGATCAAGTGGGGTATGCCTGCTTGTCGGCCCTGGTAAGCTGGG
GCCGACATGTCCCGATCTACCCTCACCCCCTCCCTCCGTCCTACCCTCCG
CCCCATCCCCAGGGCACAATGAATGATCCGCACACCCATCCACCCGTCCG
CTCTCATACAAACCCTCCACCAATCTCACATCTGCCCTTTCGTTCCCTCG
CTCCCTCACCTCCCTCCCCTTGCTACAGGCCTCCTCCCTCATCCCCGACA
ACGTCCGCAAGACCCTGACCGGCGACCAGCTCAAGACCCTCGAGGCCGCC
GCCGAGAAGGCCACCAAGGCCGCCGCCGCCGACCTTGACCCCTGGTTTGG
GGAGGCGGAGGCGGACGACTCGTCTTTCGCTCCCTTCTCCGCCCTCGAGT
CCATGACCGGCAAGCCCGCCCCGGTGCCCAGTGCCAGCGGCGCCCAGGAC
TTCCTGGAGGCGAACCCGTACTACGACCAGACCAACATCCCACTCAACAC
GTACAAGAACAAGGAGCCACACACCGGCAAGATCGTGTCCGTTAAGAGGA
TGGTGGGCCCCAAGGCCACCGGTAAGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGATGGAGAGTAACGCGTAGCAGGCCTTCCAGCAGGAGGAGGAGGAA
CTGCAAGAGAGGTGTGGAGAAGCAATCTCGTATTTCCGAGCCCGTCCGAG
CGTGCTTTTCCTTTGCGGGACCCACACGCGATATTACTCACGCCTTGTCT
GTCGCCCTCCCCTCGCCCCCTCCGCTTCAGGCGAGACGTGCCACATCATC
ATCGACCACGGGGGCGCCATGCCCTTCTGGGAGGGCCAGTCCTACGGCGT
GGTGCCCCCCGGGATCAACCCCAAGAACGGTAAGCCCAACAACGTCCGCC
TCTACTCCATCGCCTCCACCCGCTACGGCGACGACATGAAGGGCCAGACC
GCCTCCCTTTGTGTCCGTAGGGCCACGTACTGGTGCCCCGAGCTCAAGGC
CGAGGACCCTGCCAAGAAGGGCATCTGCTCCAACTTCCTCTGTGACGCCA
AGCCTGGTACGTCCTTCCTGCCTTCTTTCCCTCCCTCCCTCCCTTACTCC
TATCCAGGCAAACGGCACTGGAACATGCCACCTCCACGAAAAGGCACCCA
CCCCTCCCTCCCTCCCTCCCTCTTCCCTCACTCCCTGTCTAGGCGACAAG
ATCGCCCTGGCCGGCCCCACGGGCAAGGTAATGCTCATCCCCGAGAAGAC
CCCCGAGGCCGACATCATCATGATCGCCACGGGCACGGGCATCGCGCCCT
ACCGCACCTTTGTGCGCCGCCTGTTCGTGGAGGACACCCCGGCGCGCAAG
GCCTTCAAAGGCCTGGCTTGGCTCTTCTTGGGCGTGGCTAACACGGACTC
GCTGCTCTATGACGAGGAGTGGCAGGCGGTGAAGAAGGAGTACCCCAACA
ACTTCCGCGTGGACTACGCGCTCTCCCGCGAGCAGGAGAACAAGAAGGGC
GGCAAGATGTATATCCAGGACAAGATGGAGGAGTACGCCGACGAAATTTT
CGACCGCCTGTCCAAGGGCGGGCACATCTACTTCTGTGGCCTCAAGGGCA
TGATGCCCGGCATCCAAGAGACCCTCGAGAGGGTGGCGGGCGAGAAGGGG
ATTGACTGGAAGGAGATGCTCGACGGGTTGAAGAAGAACCACCAGTGGCA
CGTTGAGGTGTACTAAGCGTATCTCTGTCCATTCGTCCTCCTCCTACCCT
CCGTTGCTTGTGGTGGAAGGATGGGGGGTGATTAGTGCTGTGTGGAGGCA
GGAGGGGGAGAGCAGGAGGAAGGGAGGGTGGGCGGTGTGATAGCATAGTA
GTGTGCCTTGTGGCCGTCTTGACCACCTGTTCTCTTTTTCTGAGTTTAAG
AGCTGGGGGAAGGGGGGAATGAGCGGTGCCGGTGTTGGATGAGAAGGCAA
GCAGGTTTGAAAGAAAAGAAAAACAACAAAAACAACAAGAACAACATAAC
AATAACGCGCGCGGCCCCCGGCGTGTCAATTATTTCATGTCTGATGCCGC
CCAGCGGTGCCCTGTCTATGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGCTGCTAATAGTAGTGGTAGGGGAGAGAAGATGAAATCAGA
GCGATTTCGGGATTTGGAAGGCGCCCTTAGTGTGAGAAAAACAGTGAGGG
AGAAAGACATGAAAGGAATGGAGGGAGGGCCTGCTTGGACTTTTTTGGTA
GTCCTTATCAGGTGAGCAAGGGTGATTGTAGAGATCAGGTCCTTGGATTT
CTTTGTCCGAATGAAGGGATAAGAGACGAAGGAGAAGGAGGGCGAGGAGG
AGGAGGAGGAGGAGGTTATAATTCCTACTAAAGCCTTGTCCTTCACGGTA
CCATGGACTACCCGGCAATAACCAAC back to topCoding sequence (CDS) from alignment at scaffold_14:651526..654151- >mRNA_6155 ID=mRNA_6155|Name=jgi.p|Nanoce1779_2|593941|organism=Nannochloropsis oceanica|type=CDS|length=4956bp|location=Sequence derived from alignment at scaffold_14:651526..654151- (Nannochloropsis oceanica)
GCGACAAGATCGCCCTGGCCGGCCCCACGGGCAAGGTAATGCTCATCCCC
GAGAAGACCCCCGAGGCCGACATCATCATGATCGCCACGGGCACGGGCAT
CGCGCCCTACCGCACCTTTGTGCGCCGCCTGTTCGTGGAGGACACCCCGG
CGCGCAAGGCCTTCAAAGGCCTGGCTTGGCTCTTCTTGGGCGTGGCTAAC
ACGGACTCGCTGCTCTATGACGAGGAGTGGCAGGCGGTGAAGAAGGAGTA
CCCCAACAACTTCCGCGTGGACTACGCGCTCTCCCGCGAGCAGGAGAACA
AGAAGGGCGGCAAGATGTATATCCAGGACAAGATGGAGGAGTACGCCGAC
GAAATTTTCGACCGCCTGTCCAAGGGCGGGCACATCTACTTCTGTGGCCT
CAAGGGCATGATGCCCGGCATCCAAGAGACCCTCGAGAGGGTGGCGGGCG
AGAAGGGGATTGACTGGAAGGAGATGCTCGACGGGTTGAAGAAGAACCAC
CAGTGGCACGTTGAGGTGTACTAAGCGAGACGTGCCACATCATCATCGAC
CACGGGGGCGCCATGCCCTTCTGGGAGGGCCAGTCCTACGGCGTGGTGCC
CCCCGGGATCAACCCCAAGAACGGTAAGCCCAACAACGTCCGCCTCTACT
CCATCGCCTCCACCCGCTACGGCGACGACATGAAGGGCCAGACCGCCTCC
CTTTGTGTCCGTAGGGCCACGTACTGGTGCCCCGAGCTCAAGGCCGAGGA
CCCTGCCAAGAAGGGCATCTGCTCCAACTTCCTCTGTGACGCCAAGCCTG
GCCTCCTCCCTCATCCCCGACAACGTCCGCAAGACCCTGACCGGCGACCA
GCTCAAGACCCTCGAGGCCGCCGCCGAGAAGGCCACCAAGGCCGCCGCCG
CCGACCTTGACCCCTGGTTTGGGGAGGCGGAGGCGGACGACTCGTCTTTC
GCTCCCTTCTCCGCCCTCGAGTCCATGACCGGCAAGCCCGCCCCGGTGCC
CAGTGCCAGCGGCGCCCAGGACTTCCTGGAGGCGAACCCGTACTACGACC
AGACCAACATCCCACTCAACACGTACAAGAACAAGGAGCCACACACCGGC
AAGATCGTGTCCGTTAAGAGGATGGTGGGCCCCAAGGCCACCGATGCGTC
TGTCCCTCACCCTCGGGGCCTTGATGGCCTCCAGCGCGGTGGCGTTCGTG
CCCCCCATGCCCGCCTCCCGTACCCGGGCGACGAAGCTGGCGACAAGATC
GCCCTGGCCGGCCCCACGGGCAAGGTAATGCTCATCCCCGAGAAGACCCC
CGAGGCCGACATCATCATGATCGCCACGGGCACGGGCATCGCGCCCTACC
GCACCTTTGTGCGCCGCCTGTTCGTGGAGGACACCCCGGCGCGCAAGGCC
TTCAAAGGCCTGGCTTGGCTCTTCTTGGGCGTGGCTAACACGGACTCGCT
GCTCTATGACGAGGAGTGGCAGGCGGTGAAGAAGGAGTACCCCAACAACT
TCCGCGTGGACTACGCGCTCTCCCGCGAGCAGGAGAACAAGAAGGGCGGC
AAGATGTATATCCAGGACAAGATGGAGGAGTACGCCGACGAAATTTTCGA
CCGCCTGTCCAAGGGCGGGCACATCTACTTCTGTGGCCTCAAGGGCATGA
TGCCCGGCATCCAAGAGACCCTCGAGAGGGTGGCGGGCGAGAAGGGGATT
GACTGGAAGGAGATGCTCGACGGGTTGAAGAAGAACCACCAGTGGCACGT
TGAGGTGTACTAAGCGAGACGTGCCACATCATCATCGACCACGGGGGCGC
CATGCCCTTCTGGGAGGGCCAGTCCTACGGCGTGGTGCCCCCCGGGATCA
ACCCCAAGAACGGTAAGCCCAACAACGTCCGCCTCTACTCCATCGCCTCC
ACCCGCTACGGCGACGACATGAAGGGCCAGACCGCCTCCCTTTGTGTCCG
TAGGGCCACGTACTGGTGCCCCGAGCTCAAGGCCGAGGACCCTGCCAAGA
AGGGCATCTGCTCCAACTTCCTCTGTGACGCCAAGCCTGGCCTCCTCCCT
CATCCCCGACAACGTCCGCAAGACCCTGACCGGCGACCAGCTCAAGACCC
TCGAGGCCGCCGCCGAGAAGGCCACCAAGGCCGCCGCCGCCGACCTTGAC
CCCTGGTTTGGGGAGGCGGAGGCGGACGACTCGTCTTTCGCTCCCTTCTC
CGCCCTCGAGTCCATGACCGGCAAGCCCGCCCCGGTGCCCAGTGCCAGCG
GCGCCCAGGACTTCCTGGAGGCGAACCCGTACTACGACCAGACCAACATC
CCACTCAACACGTACAAGAACAAGGAGCCACACACCGGCAAGATCGTGTC
CGTTAAGAGGATGGTGGGCCCCAAGGCCACCGATGCGTCTGTCCCTCACC
CTCGGGGCCTTGATGGCCTCCAGCGCGGTGGCGTTCGTGCCCCCCATGCC
CGCCTCCCGTACCCGGGCGACGAAGCTGGCGACAAGATCGCCCTGGCCGG
CCCCACGGGCAAGGTAATGCTCATCCCCGAGAAGACCCCCGAGGCCGACA
TCATCATGATCGCCACGGGCACGGGCATCGCGCCCTACCGCACCTTTGTG
CGCCGCCTGTTCGTGGAGGACACCCCGGCGCGCAAGGCCTTCAAAGGCCT
GGCTTGGCTCTTCTTGGGCGTGGCTAACACGGACTCGCTGCTCTATGACG
AGGAGTGGCAGGCGGTGAAGAAGGAGTACCCCAACAACTTCCGCGTGGAC
TACGCGCTCTCCCGCGAGCAGGAGAACAAGAAGGGCGGCAAGATGTATAT
CCAGGACAAGATGGAGGAGTACGCCGACGAAATTTTCGACCGCCTGTCCA
AGGGCGGGCACATCTACTTCTGTGGCCTCAAGGGCATGATGCCCGGCATC
CAAGAGACCCTCGAGAGGGTGGCGGGCGAGAAGGGGATTGACTGGAAGGA
GATGCTCGACGGGTTGAAGAAGAACCACCAGTGGCACGTTGAGGTGTACT
AAGCGAGACGTGCCACATCATCATCGACCACGGGGGCGCCATGCCCTTCT
GGGAGGGCCAGTCCTACGGCGTGGTGCCCCCCGGGATCAACCCCAAGAAC
GGTAAGCCCAACAACGTCCGCCTCTACTCCATCGCCTCCACCCGCTACGG
CGACGACATGAAGGGCCAGACCGCCTCCCTTTGTGTCCGTAGGGCCACGT
ACTGGTGCCCCGAGCTCAAGGCCGAGGACCCTGCCAAGAAGGGCATCTGC
TCCAACTTCCTCTGTGACGCCAAGCCTGGCCTCCTCCCTCATCCCCGACA
ACGTCCGCAAGACCCTGACCGGCGACCAGCTCAAGACCCTCGAGGCCGCC
GCCGAGAAGGCCACCAAGGCCGCCGCCGCCGACCTTGACCCCTGGTTTGG
GGAGGCGGAGGCGGACGACTCGTCTTTCGCTCCCTTCTCCGCCCTCGAGT
CCATGACCGGCAAGCCCGCCCCGGTGCCCAGTGCCAGCGGCGCCCAGGAC
TTCCTGGAGGCGAACCCGTACTACGACCAGACCAACATCCCACTCAACAC
GTACAAGAACAAGGAGCCACACACCGGCAAGATCGTGTCCGTTAAGAGGA
TGGTGGGCCCCAAGGCCACCGATGCGTCTGTCCCTCACCCTCGGGGCCTT
GATGGCCTCCAGCGCGGTGGCGTTCGTGCCCCCCATGCCCGCCTCCCGTA
CCCGGGCGACGAAGCTGGCGACAAGATCGCCCTGGCCGGCCCCACGGGCA
AGGTAATGCTCATCCCCGAGAAGACCCCCGAGGCCGACATCATCATGATC
GCCACGGGCACGGGCATCGCGCCCTACCGCACCTTTGTGCGCCGCCTGTT
CGTGGAGGACACCCCGGCGCGCAAGGCCTTCAAAGGCCTGGCTTGGCTCT
TCTTGGGCGTGGCTAACACGGACTCGCTGCTCTATGACGAGGAGTGGCAG
GCGGTGAAGAAGGAGTACCCCAACAACTTCCGCGTGGACTACGCGCTCTC
CCGCGAGCAGGAGAACAAGAAGGGCGGCAAGATGTATATCCAGGACAAGA
TGGAGGAGTACGCCGACGAAATTTTCGACCGCCTGTCCAAGGGCGGGCAC
ATCTACTTCTGTGGCCTCAAGGGCATGATGCCCGGCATCCAAGAGACCCT
CGAGAGGGTGGCGGGCGAGAAGGGGATTGACTGGAAGGAGATGCTCGACG
GGTTGAAGAAGAACCACCAGTGGCACGTTGAGGTGTACTAAGCGAGACGT
GCCACATCATCATCGACCACGGGGGCGCCATGCCCTTCTGGGAGGGCCAG
TCCTACGGCGTGGTGCCCCCCGGGATCAACCCCAAGAACGGTAAGCCCAA
CAACGTCCGCCTCTACTCCATCGCCTCCACCCGCTACGGCGACGACATGA
AGGGCCAGACCGCCTCCCTTTGTGTCCGTAGGGCCACGTACTGGTGCCCC
GAGCTCAAGGCCGAGGACCCTGCCAAGAAGGGCATCTGCTCCAACTTCCT
CTGTGACGCCAAGCCTGGCCTCCTCCCTCATCCCCGACAACGTCCGCAAG
ACCCTGACCGGCGACCAGCTCAAGACCCTCGAGGCCGCCGCCGAGAAGGC
CACCAAGGCCGCCGCCGCCGACCTTGACCCCTGGTTTGGGGAGGCGGAGG
CGGACGACTCGTCTTTCGCTCCCTTCTCCGCCCTCGAGTCCATGACCGGC
AAGCCCGCCCCGGTGCCCAGTGCCAGCGGCGCCCAGGACTTCCTGGAGGC
GAACCCGTACTACGACCAGACCAACATCCCACTCAACACGTACAAGAACA
AGGAGCCACACACCGGCAAGATCGTGTCCGTTAAGAGGATGGTGGGCCCC
AAGGCCACCGATGCGTCTGTCCCTCACCCTCGGGGCCTTGATGGCCTCCA
GCGCGGTGGCGTTCGTGCCCCCCATGCCCGCCTCCCGTACCCGGGCGACG
AAGCTG back to top
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