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Properties
| Property Name | Value |
|---|
| TranscriptId | 82916 |
| Track | FilteredModels2 |
| ProteinId | 82830 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:630356..631451 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6146 ID=mRNA_6146|Name=jgi.p|Nanoce1779_2|82830|organism=Nannochloropsis oceanica|type=mRNA|length=896bp
CTTTCTACCCTTGCTTCCTCCTTCCGCAGGTACAACCGCGGCGTCTACCC
CTCCGCCGTCTTTGAACGCCGGCGGAAATATGACGTGCCCGTTTTCATGA
GTCGTCACCCGGACCTAAATCTGTACATACACGAGGTGATGCAAGCTGCG
GGAGGCATGTTGATGGAGGGATCGATCGATAAGATTGTCTTGACGCTGTA
TGGGAGCAGCAACAATGACGCCCCCCAAACCCCCCTGGAGTCTTTCGCCT
TTGAGCTGCTCTCTTCCCCCTTACTCATTCAAGCCTTGGCGGAAGGCAGT
CTGGAAGACCCCTTTCCGGCGTTTCGGAAGGTGCTAGCCCGCATCAGCAT
CGCCGAGGAAGTCGCTGAGCTAGCACCCGTCCCCCATGACGTGACGTTCG
CCATCCTCCTGGCTACACGTCCTCACCATCAGCAGCAGCAGCAACAACAA
CAACGACGACAAGCGAATGGTGGGAAAGAGGGAGGACAGGAAGGAGTGGG
GCTGGAGGTGCCTCCTGCATGGACAGCAGCTATTAGCTCGGGGGAATTCG
CGCCAGGGGGCCCCGAAAGTCATCTGGCGACGACGATAGAAGGAAAGGGG
GGGGGGGGGGGAGGAAGGTACGGCATACCTGAATTTGGTGAATTGGGAGA
ATTTCAGTGGAGGAAGAAGAGGAGGAGAGGATAGCGGAAGGTGTGCGCCG
CACATGCGGGTCGTGGTTCGAAGTCGGTTGCATACCTAGCCGCCGCCGAT
GGCACGAGGGCTGTGACAGGAGAAGAAGGAGGTTTAGACAAGAGCACCAC
GGCCAGGTACCCGGAGGTGTCGCGGTTGCTGGAGGTGCTGGGAATGTGCA
CAAAAAATATGTTGTAAAAATATTAGGCGAAAGGACGCTACCAACA back to topprotein sequence of jgi.p|Nanoce1779_2|82830 >mRNA_6146-protein ID=mRNA_6146-protein|Name=jgi.p|Nanoce1779_2|82830|organism=Nannochloropsis oceanica|type=polypeptide|length=196bp
MSRHPDLNLYIHEVMQAAGGMLMEGSIDKIVLTLYGSSNNDAPQTPLESF
AFELLSSPLLIQALAEGSLEDPFPAFRKVLARISIAEEVAELAPVPHDVT
FAILLATRPHHQQQQQQQQRRQANGGKEGGQEGVGLEVPPAWTAAISSGE
FAPGGPESHLATTIEGKGGGGGGRYGIPEFGELGEFQWRKKRRRG* back to topmRNA from alignment at scaffold_14:630356..631451- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6146 ID=mRNA_6146|Name=jgi.p|Nanoce1779_2|82830|organism=Nannochloropsis oceanica|type=mRNA|length=1096bp|location=Sequence derived from alignment at scaffold_14:630356..631451- (Nannochloropsis oceanica)
CTTTCTACCCTTGCTTCCTCCTTCCGCAGGTACAACCGCGGCGTCTACCC
CTCCGCCGTCTTTGAACGCCGGCGGAAATATGACGTGCCCGTTTTCATGA
GTCGTCACCCGGACCTAAATCTGTACATACACGAGGTGATGCAAGCTGCG
GGAGGCATGTTGATGGAGGGATCGATCGATAAGATTGTCTTGACGCTGTA
TGGGAGCAGGTAGGGAGGTAGGAGGAAGGTGTACAACGACAGCGCTAGAA
GAGGGTCCGTAGGATCCGACACAGACACGCACATACACAGGCACACACGC
TCACACACAAAATCACACAGCAACAATGACGCCCCCCAAACCCCCCTGGA
GTCTTTCGCCTTTGAGCTGCTCTCTTCCCCCTTACTCATTCAAGCCTTGG
CGGAAGGCAGTCTGGAAGACCCCTTTCCGGCGTTTCGGAAGGTGCTAGCC
CGCATCAGCATCGCCGAGGTAAGTGGCCCTCTTTTTACGGAGTGGCGTGT
ACATTATTTCTGGGCTCATCTTCTCCACTCCTATCTCCCTTTCTCCCTCC
CTCCCAGGAAGTCGCTGAGCTAGCACCCGTCCCCCATGACGTGACGTTCG
CCATCCTCCTGGCTACACGTCCTCACCATCAGCAGCAGCAGCAACAACAA
CAACGACGACAAGCGAATGGTGGGAAAGAGGGAGGACAGGAAGGAGTGGG
GCTGGAGGTGCCTCCTGCATGGACAGCAGCTATTAGCTCGGGGGAATTCG
CGCCAGGGGGCCCCGAAAGTCATCTGGCGACGACGATAGAAGGAAAGGGG
GGGGGGGGGGGAGGAAGGTACGGCATACCTGAATTTGGTGAATTGGGAGA
ATTTCAGTGGAGGAAGAAGAGGAGGAGAGGATAGCGGAAGGTGTGCGCCG
CACATGCGGGTCGTGGTTCGAAGTCGGTTGCATACCTAGCCGCCGCCGAT
GGCACGAGGGCTGTGACAGGAGAAGAAGGAGGTTTAGACAAGAGCACCAC
GGCCAGGTACCCGGAGGTGTCGCGGTTGCTGGAGGTGCTGGGAATGTGCA
CAAAAAATATGTTGTAAAAATATTAGGCGAAAGGACGCTACCAACA back to topCoding sequence (CDS) from alignment at scaffold_14:630356..631451- >mRNA_6146 ID=mRNA_6146|Name=jgi.p|Nanoce1779_2|82830|organism=Nannochloropsis oceanica|type=CDS|length=1764bp|location=Sequence derived from alignment at scaffold_14:630356..631451- (Nannochloropsis oceanica)
GAAGTCGCTGAGCTAGCACCCGTCCCCCATGACGTGACGTTCGCCATCCT
CCTGGCTACACGTCCTCACCATCAGCAGCAGCAGCAACAACAACAACGAC
GACAAGCGAATGGTGGGAAAGAGGGAGGACAGGAAGGAGTGGGGCTGGAG
GTGCCTCCTGCATGGACAGCAGCTATTAGCTCGGGGGAATTCGCGCCAGG
GGGCCCCGAAAGTCATCTGGCGACGACGATAGAAGGAAAGGGGGGGGGGG
GGGGAGGAAGGTACGGCATACCTGAATTTGGTGAATTGGGAGAATTTCAG
TGGAGGAAGAAGAGGAGGAGAGGATAGCAACAATGACGCCCCCCAAACCC
CCCTGGAGTCTTTCGCCTTTGAGCTGCTCTCTTCCCCCTTACTCATTCAA
GCCTTGGCGGAAGGCAGTCTGGAAGACCCCTTTCCGGCGTTTCGGAAGGT
GCTAGCCCGCATCAGCATCGCCGAGATGAGTCGTCACCCGGACCTAAATC
TGTACATACACGAGGTGATGCAAGCTGCGGGAGGCATGTTGATGGAGGGA
TCGATCGATAAGATTGTCTTGACGCTGTATGGGAGCAGGAAGTCGCTGAG
CTAGCACCCGTCCCCCATGACGTGACGTTCGCCATCCTCCTGGCTACACG
TCCTCACCATCAGCAGCAGCAGCAACAACAACAACGACGACAAGCGAATG
GTGGGAAAGAGGGAGGACAGGAAGGAGTGGGGCTGGAGGTGCCTCCTGCA
TGGACAGCAGCTATTAGCTCGGGGGAATTCGCGCCAGGGGGCCCCGAAAG
TCATCTGGCGACGACGATAGAAGGAAAGGGGGGGGGGGGGGGAGGAAGGT
ACGGCATACCTGAATTTGGTGAATTGGGAGAATTTCAGTGGAGGAAGAAG
AGGAGGAGAGGATAGCAACAATGACGCCCCCCAAACCCCCCTGGAGTCTT
TCGCCTTTGAGCTGCTCTCTTCCCCCTTACTCATTCAAGCCTTGGCGGAA
GGCAGTCTGGAAGACCCCTTTCCGGCGTTTCGGAAGGTGCTAGCCCGCAT
CAGCATCGCCGAGATGAGTCGTCACCCGGACCTAAATCTGTACATACACG
AGGTGATGCAAGCTGCGGGAGGCATGTTGATGGAGGGATCGATCGATAAG
ATTGTCTTGACGCTGTATGGGAGCAGGAAGTCGCTGAGCTAGCACCCGTC
CCCCATGACGTGACGTTCGCCATCCTCCTGGCTACACGTCCTCACCATCA
GCAGCAGCAGCAACAACAACAACGACGACAAGCGAATGGTGGGAAAGAGG
GAGGACAGGAAGGAGTGGGGCTGGAGGTGCCTCCTGCATGGACAGCAGCT
ATTAGCTCGGGGGAATTCGCGCCAGGGGGCCCCGAAAGTCATCTGGCGAC
GACGATAGAAGGAAAGGGGGGGGGGGGGGGAGGAAGGTACGGCATACCTG
AATTTGGTGAATTGGGAGAATTTCAGTGGAGGAAGAAGAGGAGGAGAGGA
TAGCAACAATGACGCCCCCCAAACCCCCCTGGAGTCTTTCGCCTTTGAGC
TGCTCTCTTCCCCCTTACTCATTCAAGCCTTGGCGGAAGGCAGTCTGGAA
GACCCCTTTCCGGCGTTTCGGAAGGTGCTAGCCCGCATCAGCATCGCCGA
GATGAGTCGTCACCCGGACCTAAATCTGTACATACACGAGGTGATGCAAG
CTGCGGGAGGCATGTTGATGGAGGGATCGATCGATAAGATTGTCTTGACG
CTGTATGGGAGCAG back to top
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