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Properties
| Property Name | Value |
|---|
| TranscriptId | 593933 |
| Track | FilteredModels2 |
| ProteinId | 593847 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:585688..587811 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6131 ID=mRNA_6131|Name=jgi.p|Nanoce1779_2|593847|organism=Nannochloropsis oceanica|type=mRNA|length=1991bp
AGCCTCTACGCCCCGCACTTTGACAAAGGCTCCAGCAACCGATTGACGAT
CACACCTTCCACCGAGCAGCACAACCACCACCAGCAGCGCCCACGCCACA
TTCCCAATGTCCCGCACAGAGGTGGCGCGGGGGTTATCCTTGACGGCTTC
CCGGCTGTCAATGTTGCAGAGGTGGTCACCATTTCACTCTCCGCGGGTTT
TATTGTCGACCTCCCGGCTCCCTCAGCAGCACCAACACCGGCATGCTCAC
CCTCCCAAGCCCTCGATCTCTTCATACGGCATCGCAGCAGTGGCGGCTGC
CGCATCCTCCATGGCTCTAGCTATGCAACCCGATAATGATGGTAGCAGCA
GCAGGCTGACAGCATGCCATGCATCGTCCCCGCAAGAAACTTCGGCGAAG
GAGCAGCAGCAGCAGCAGCAGCAGCCACCGCAAAAAGCAGGCATCCCGCT
CGAATTTCTGGCGGGGCTTCGAGAGATAGTGGGCGAAGCAAATATCACGG
ACGATGCTGATGAATGCGCGCATCACGGCAAGCCATGGAGTTCGTATCAC
AAGATCCCCTCTGTACCGGACGTAGTGGTGCAGCCGGGCTCCACCGAAGA
CGTCTCGCGCATCTTGCGGCTATGTTGGGCATACCGCATCCCTGTCGTTG
CCTACGGGGGCGCCACCTCCCTAGAAGGCCACACATTGGCGCCGGCTAGG
GGCGTGTCGCTGGATATGAATCGAATGAACAAAATCTTGAGGGTGTCAGT
CGAAGACTTAGATGCCACTGTGCAGGCAGGTTTGGGCTACCTCGATCTCA
ATGAATCTCTGGCGCCACAGAAGATTTGCTTCCCCTTAGATCCAGGGCCT
GGGGCGTCTATTGGCGGCATGTGTGCTTGCCGCTGCTCGGGCTCGACGGC
AGTGAAATACGGGACCATGCGCGACAACGTCTTGAATGTCACAGCAGTCC
TCGCCGACGGCACCGTCTTGCGCACCGGCACCCGAGCACGCAAATCTGCA
GCAGGCTACGACTTGACACGGATGCTGATTGGAAGCGAGGGCACCTTAGG
TGTCATAACTGAAGTGACTTTGCGTCTGCGTCGTAAGCCGGAGCGATCTG
CGGCCCTTCGCGTGTGCTTCCCATCCGTGCGGCAAGCGGCAGCAGCTGCC
AATGCCACGCTCCAGGCTGGGGTGGAGGTGGGGAGGTGTGAGTTGATGGA
TGATGATATGATCCGCATTATGAATCAGATGACGGGCGAGAAGGCTATGG
AAGCCACGACGTTGCTGTATGAATTGGTAGGTACATCCGAGACGACGGTA
CAGGAGCAGGTAGCGCAGGTGCAGAAGGTCGTGGGGGAGCATGGAGGGTA
TGGACTCGAGACATCTGAGAATGCGGCTCACGCAGTACAAATGTGGCGGG
CCCGAAAGGAGGCCCTCTGGTCGACGCAGGCGGCGTACCCGGACAGAGAG
GTAATGATTACTGATGTCTGCGTACCTTTGTCTAATCTGGCAGATTTAAT
CGGGCAGACCAAGGACGAGATTCAGGCCTCGTTTTTGCCCTCTCCTTTGG
TGGCTCATGCGGGGGACGGAAATTTCCATGCATTTATAACCTTTCATCCT
GACAAGCAGGATGAAGTGGCGGAGGCCAAGCGACTGAGTGCGCGGATGGT
GGAGATGGCCTTGGCAATGGATGGGACATGCACGGGCGAGCATGGCGTGG
GGATGGGGAAAATCAAGTATCTGGAGGCGGAGCTCGGGCCTGGTGCTATC
AAAACCATGGGGACGATCAAGCGCGCCCTGGATCCGCATAACCTTTTAAA
TCCGGGGAAGATATTACATCAGACCATGGACCCCAGGACGGGGCGTTTCC
ATTTGTGTGTATGAGTCGGAAAGTGATAGTTGAGCCATGAGAAATGGTTT
GAGAGAACAGGAACAAACGAGGGGAACAAACGAGACGCACGTATACATCA
CGAAACGGTGATCTACTCTCGGGATTTATTTTATTCTTTCA back to topprotein sequence of jgi.p|Nanoce1779_2|593847 >mRNA_6131-protein ID=mRNA_6131-protein|Name=jgi.p|Nanoce1779_2|593847|organism=Nannochloropsis oceanica|type=polypeptide|length=586bp
MSRTEVARGLSLTASRLSMLQRWSPFHSPRVLLSTSRLPQQHQHRHAHPP
KPSISSYGIAAVAAAASSMALAMQPDNDGSSSRLTACHASSPQETSAKEQ
QQQQQQPPQKAGIPLEFLAGLREIVGEANITDDADECAHHGKPWSSYHKI
PSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGV
SLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGA
SIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAG
YDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANA
TLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQE
QVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVM
ITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDK
QDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKT
MGTIKRALDPHNLLNPGKILHQTMDPRTGRFHLCV* back to topmRNA from alignment at scaffold_14:585688..587811- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6131 ID=mRNA_6131|Name=jgi.p|Nanoce1779_2|593847|organism=Nannochloropsis oceanica|type=mRNA|length=2124bp|location=Sequence derived from alignment at scaffold_14:585688..587811- (Nannochloropsis oceanica)
AGCCTCTACGCCCCGCACTTTGACAAAGGCTCCAGCAACCGATTGACGAT
CACACCTTCCACCGAGCAGCACAACCACCACCAGCAGCGCCCACGCCACA
TTCCCAATGTCCCGCACAGAGGTGGCGCGGGGGTTATCCTTGACGGCTTC
CCGGCTGTCAATGTTGCAGAGGTGGTCACCATTTCACTCTCCGCGGGTTT
TATTGTCGACCTCCCGGCTCCCTCAGCAGCACCAACACCGGCATGCTCAC
CCTCCCAAGCCCTCGATCTCTTCATACGGCATCGCAGCAGTGGCGGCTGC
CGCATCCTCCATGGCTCTAGCTATGCAACCCGATAATGATGGTAGCAGCA
GCAGGCTGACAGCATGCCATGCATCGTCCCCGCAAGAAACTTCGGCGAAG
GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCGCAAAAAGC
AGGCATCCCGCTCGAATTTCTGGCGGGGCTTCGAGAGATAGTGGGCGAAG
CAAATATCACGGACGATGCTGATGAATGCGCGCATCACGGCAAGCCATGG
AGTTCGTATCACAAGATCCCCTCTGTACCGGACGTAGTGGTGCAGCCGGG
CTCCACCGAAGACGTCTCGCGCATCTTGCGGCTATGTTGGTACGTGACAA
GTGATTGTGAGGGATGTAGATTAGTCTGGAGGAAAGACACATAGATTTTT
TTTTTTACTTTGTCTCACATCTCTAACTCTTTCACCCCACTTAACCACAT
CACAAATCAGGGCATACCGCATCCCTGTCGTTGCCTACGGGGGCGCCACC
TCCCTAGAAGGCCACACATTGGCGCCGGCTAGGGGCGTGTCGCTGGATAT
GAATCGAATGAACAAAATCTTGAGGGTGTCAGTCGAAGACTTAGATGCCA
CTGTGCAGGCAGGTTTGGGCTACCTCGATCTCAATGAATCTCTGGCGCCA
CAGAAGATTTGCTTCCCCTTAGATCCAGGGCCTGGGGCGTCTATTGGCGG
CATGTGTGCTTGCCGCTGCTCGGGCTCGACGGCAGTGAAATACGGGACCA
TGCGCGACAACGTCTTGAATGTCACAGCAGTCCTCGCCGACGGCACCGTC
TTGCGCACCGGCACCCGAGCACGCAAATCTGCAGCAGGCTACGACTTGAC
ACGGATGCTGATTGGAAGCGAGGGCACCTTAGGTGTCATAACTGAAGTGA
CTTTGCGTCTGCGTCGTAAGCCGGAGCGATCTGCGGCCCTTCGCGTGTGC
TTCCCATCCGTGCGGCAAGCGGCAGCAGCTGCCAATGCCACGCTCCAGGC
TGGGGTGGAGGTGGGGAGGTGTGAGTTGATGGATGATGATATGATCCGCA
TTATGAATCAGATGACGGGCGAGAAGGCTATGGAAGCCACGACGTTGCTG
TATGAATTGGTAGGTACATCCGAGACGACGGTACAGGAGCAGGTAGCGCA
GGTGCAGAAGGTCGTGGGGGAGCATGGAGGGTATGGACTCGAGACATCTG
AGAATGCGGCTCACGCAGTACAAATGTGGCGGGCCCGAAAGGAGGCCCTC
TGGTCGACGCAGGCGGCGTACCCGGACAGAGAGGTAATGATTACTGATGT
CTGCGTACCTTTGTCTAATCTGGCAGATTTAATCGGGCAGACCAAGGACG
AGATTCAGGCCTCGTTTTTGCCCTCTCCTTTGGTGGCTCATGCGGGGGAC
GGAAATTTCCATGCATTTATAACCTTTCATCCTGACAAGCAGGATGAAGT
GGCGGAGGCCAAGCGACTGAGTGCGCGGATGGTGGAGATGGCCTTGGCAA
TGGATGGGACATGCACGGGCGAGCATGGCGTGGGGATGGGGAAAATCAAG
TATCTGGAGGCGGAGCTCGGGCCTGGTGCTATCAAAACCATGGGGACGAT
CAAGCGCGCCCTGGATCCGCATAACCTTTTAAATCCGGGGAAGATATTAC
ATCAGACCATGGACCCCAGGACGGGGCGTTTCCATTTGTGTGTATGAGTC
GGAAAGTGATAGTTGAGCCATGAGAAATGGTTTGAGAGAACAGGAACAAA
CGAGGGGAACAAACGAGACGCACGTATACATCACGAAACGGTGATCTACT
CTCGGGATTTATTTTATTCTTTCA back to topCoding sequence (CDS) from alignment at scaffold_14:585688..587811- >mRNA_6131 ID=mRNA_6131|Name=jgi.p|Nanoce1779_2|593847|organism=Nannochloropsis oceanica|type=CDS|length=5274bp|location=Sequence derived from alignment at scaffold_14:585688..587811- (Nannochloropsis oceanica)
GGCATACCGCATCCCTGTCGTTGCCTACGGGGGCGCCACCTCCCTAGAAG
GCCACACATTGGCGCCGGCTAGGGGCGTGTCGCTGGATATGAATCGAATG
AACAAAATCTTGAGGGTGTCAGTCGAAGACTTAGATGCCACTGTGCAGGC
AGGTTTGGGCTACCTCGATCTCAATGAATCTCTGGCGCCACAGAAGATTT
GCTTCCCCTTAGATCCAGGGCCTGGGGCGTCTATTGGCGGCATGTGTGCT
TGCCGCTGCTCGGGCTCGACGGCAGTGAAATACGGGACCATGCGCGACAA
CGTCTTGAATGTCACAGCAGTCCTCGCCGACGGCACCGTCTTGCGCACCG
GCACCCGAGCACGCAAATCTGCAGCAGGCTACGACTTGACACGGATGCTG
ATTGGAAGCGAGGGCACCTTAGGTGTCATAACTGAAGTGACTTTGCGTCT
GCGTCGTAAGCCGGAGCGATCTGCGGCCCTTCGCGTGTGCTTCCCATCCG
TGCGGCAAGCGGCAGCAGCTGCCAATGCCACGCTCCAGGCTGGGGTGGAG
GTGGGGAGGTGTGAGTTGATGGATGATGATATGATCCGCATTATGAATCA
GATGACGGGCGAGAAGGCTATGGAAGCCACGACGTTGCTGTATGAATTGG
TAGGTACATCCGAGACGACGGTACAGGAGCAGGTAGCGCAGGTGCAGAAG
GTCGTGGGGGAGCATGGAGGGTATGGACTCGAGACATCTGAGAATGCGGC
TCACGCAGTACAAATGTGGCGGGCCCGAAAGGAGGCCCTCTGGTCGACGC
AGGCGGCGTACCCGGACAGAGAGGTAATGATTACTGATGTCTGCGTACCT
TTGTCTAATCTGGCAGATTTAATCGGGCAGACCAAGGACGAGATTCAGGC
CTCGTTTTTGCCCTCTCCTTTGGTGGCTCATGCGGGGGACGGAAATTTCC
ATGCATTTATAACCTTTCATCCTGACAAGCAGGATGAAGTGGCGGAGGCC
AAGCGACTGAGTGCGCGGATGGTGGAGATGGCCTTGGCAATGGATGGGAC
ATGCACGGGCGAGCATGGCGTGGGGATGGGGAAAATCAAGTATCTGGAGG
CGGAGCTCGGGCCTGGTGCTATCAAAACCATGGGGACGATCAAGCGCGCC
CTGGATCCGCATAACCTTTTAAATCCGGGGAAGATATTACATCAGACCAT
GGACCCCAGGACGGGGCGTTTCCATTTGTGTGTATGAAGCAGCAGCAGCC
ACCGCAAAAAGCAGGCATCCCGCTCGAATTTCTGGCGGGGCTTCGAGAGA
TAGTGGGCGAAGCAAATATCACGGACGATGCTGATGAATGCGCGCATCAC
GGCAAGCCATGGAGTTCGTATCACAAGATCCCCTCTGTACCGGACGTAGT
GGTGCAGCCGGGCTCCACCGAAGACGTCTCGCGCATCTTGCGGCTATGTT
GATGTCCCGCACAGAGGTGGCGCGGGGGTTATCCTTGACGGCTTCCCGGC
TGTCAATGTTGCAGAGGTGGTCACCATTTCACTCTCCGCGGGTTTTATTG
TCGACCTCCCGGCTCCCTCAGCAGCACCAACACCGGCATGCTCACCCTCC
CAAGCCCTCGATCTCTTCATACGGCATCGCAGCAGTGGCGGCTGCCGCAT
CCTCCATGGCTCTAGCTATGCAACCCGATAATGATGGTAGCAGCAGCAGG
CTGACAGCATGCCATGCATCGTCCCCGCAAGAAACTTCGGCGAAGGAGCA
GCAGCAGCGGCATACCGCATCCCTGTCGTTGCCTACGGGGGCGCCACCTC
CCTAGAAGGCCACACATTGGCGCCGGCTAGGGGCGTGTCGCTGGATATGA
ATCGAATGAACAAAATCTTGAGGGTGTCAGTCGAAGACTTAGATGCCACT
GTGCAGGCAGGTTTGGGCTACCTCGATCTCAATGAATCTCTGGCGCCACA
GAAGATTTGCTTCCCCTTAGATCCAGGGCCTGGGGCGTCTATTGGCGGCA
TGTGTGCTTGCCGCTGCTCGGGCTCGACGGCAGTGAAATACGGGACCATG
CGCGACAACGTCTTGAATGTCACAGCAGTCCTCGCCGACGGCACCGTCTT
GCGCACCGGCACCCGAGCACGCAAATCTGCAGCAGGCTACGACTTGACAC
GGATGCTGATTGGAAGCGAGGGCACCTTAGGTGTCATAACTGAAGTGACT
TTGCGTCTGCGTCGTAAGCCGGAGCGATCTGCGGCCCTTCGCGTGTGCTT
CCCATCCGTGCGGCAAGCGGCAGCAGCTGCCAATGCCACGCTCCAGGCTG
GGGTGGAGGTGGGGAGGTGTGAGTTGATGGATGATGATATGATCCGCATT
ATGAATCAGATGACGGGCGAGAAGGCTATGGAAGCCACGACGTTGCTGTA
TGAATTGGTAGGTACATCCGAGACGACGGTACAGGAGCAGGTAGCGCAGG
TGCAGAAGGTCGTGGGGGAGCATGGAGGGTATGGACTCGAGACATCTGAG
AATGCGGCTCACGCAGTACAAATGTGGCGGGCCCGAAAGGAGGCCCTCTG
GTCGACGCAGGCGGCGTACCCGGACAGAGAGGTAATGATTACTGATGTCT
GCGTACCTTTGTCTAATCTGGCAGATTTAATCGGGCAGACCAAGGACGAG
ATTCAGGCCTCGTTTTTGCCCTCTCCTTTGGTGGCTCATGCGGGGGACGG
AAATTTCCATGCATTTATAACCTTTCATCCTGACAAGCAGGATGAAGTGG
CGGAGGCCAAGCGACTGAGTGCGCGGATGGTGGAGATGGCCTTGGCAATG
GATGGGACATGCACGGGCGAGCATGGCGTGGGGATGGGGAAAATCAAGTA
TCTGGAGGCGGAGCTCGGGCCTGGTGCTATCAAAACCATGGGGACGATCA
AGCGCGCCCTGGATCCGCATAACCTTTTAAATCCGGGGAAGATATTACAT
CAGACCATGGACCCCAGGACGGGGCGTTTCCATTTGTGTGTATGAAGCAG
CAGCAGCCACCGCAAAAAGCAGGCATCCCGCTCGAATTTCTGGCGGGGCT
TCGAGAGATAGTGGGCGAAGCAAATATCACGGACGATGCTGATGAATGCG
CGCATCACGGCAAGCCATGGAGTTCGTATCACAAGATCCCCTCTGTACCG
GACGTAGTGGTGCAGCCGGGCTCCACCGAAGACGTCTCGCGCATCTTGCG
GCTATGTTGATGTCCCGCACAGAGGTGGCGCGGGGGTTATCCTTGACGGC
TTCCCGGCTGTCAATGTTGCAGAGGTGGTCACCATTTCACTCTCCGCGGG
TTTTATTGTCGACCTCCCGGCTCCCTCAGCAGCACCAACACCGGCATGCT
CACCCTCCCAAGCCCTCGATCTCTTCATACGGCATCGCAGCAGTGGCGGC
TGCCGCATCCTCCATGGCTCTAGCTATGCAACCCGATAATGATGGTAGCA
GCAGCAGGCTGACAGCATGCCATGCATCGTCCCCGCAAGAAACTTCGGCG
AAGGAGCAGCAGCAGCGGCATACCGCATCCCTGTCGTTGCCTACGGGGGC
GCCACCTCCCTAGAAGGCCACACATTGGCGCCGGCTAGGGGCGTGTCGCT
GGATATGAATCGAATGAACAAAATCTTGAGGGTGTCAGTCGAAGACTTAG
ATGCCACTGTGCAGGCAGGTTTGGGCTACCTCGATCTCAATGAATCTCTG
GCGCCACAGAAGATTTGCTTCCCCTTAGATCCAGGGCCTGGGGCGTCTAT
TGGCGGCATGTGTGCTTGCCGCTGCTCGGGCTCGACGGCAGTGAAATACG
GGACCATGCGCGACAACGTCTTGAATGTCACAGCAGTCCTCGCCGACGGC
ACCGTCTTGCGCACCGGCACCCGAGCACGCAAATCTGCAGCAGGCTACGA
CTTGACACGGATGCTGATTGGAAGCGAGGGCACCTTAGGTGTCATAACTG
AAGTGACTTTGCGTCTGCGTCGTAAGCCGGAGCGATCTGCGGCCCTTCGC
GTGTGCTTCCCATCCGTGCGGCAAGCGGCAGCAGCTGCCAATGCCACGCT
CCAGGCTGGGGTGGAGGTGGGGAGGTGTGAGTTGATGGATGATGATATGA
TCCGCATTATGAATCAGATGACGGGCGAGAAGGCTATGGAAGCCACGACG
TTGCTGTATGAATTGGTAGGTACATCCGAGACGACGGTACAGGAGCAGGT
AGCGCAGGTGCAGAAGGTCGTGGGGGAGCATGGAGGGTATGGACTCGAGA
CATCTGAGAATGCGGCTCACGCAGTACAAATGTGGCGGGCCCGAAAGGAG
GCCCTCTGGTCGACGCAGGCGGCGTACCCGGACAGAGAGGTAATGATTAC
TGATGTCTGCGTACCTTTGTCTAATCTGGCAGATTTAATCGGGCAGACCA
AGGACGAGATTCAGGCCTCGTTTTTGCCCTCTCCTTTGGTGGCTCATGCG
GGGGACGGAAATTTCCATGCATTTATAACCTTTCATCCTGACAAGCAGGA
TGAAGTGGCGGAGGCCAAGCGACTGAGTGCGCGGATGGTGGAGATGGCCT
TGGCAATGGATGGGACATGCACGGGCGAGCATGGCGTGGGGATGGGGAAA
ATCAAGTATCTGGAGGCGGAGCTCGGGCCTGGTGCTATCAAAACCATGGG
GACGATCAAGCGCGCCCTGGATCCGCATAACCTTTTAAATCCGGGGAAGA
TATTACATCAGACCATGGACCCCAGGACGGGGCGTTTCCATTTGTGTGTA
TGAAGCAGCAGCAGCCACCGCAAAAAGCAGGCATCCCGCTCGAATTTCTG
GCGGGGCTTCGAGAGATAGTGGGCGAAGCAAATATCACGGACGATGCTGA
TGAATGCGCGCATCACGGCAAGCCATGGAGTTCGTATCACAAGATCCCCT
CTGTACCGGACGTAGTGGTGCAGCCGGGCTCCACCGAAGACGTCTCGCGC
ATCTTGCGGCTATGTTGATGTCCCGCACAGAGGTGGCGCGGGGGTTATCC
TTGACGGCTTCCCGGCTGTCAATGTTGCAGAGGTGGTCACCATTTCACTC
TCCGCGGGTTTTATTGTCGACCTCCCGGCTCCCTCAGCAGCACCAACACC
GGCATGCTCACCCTCCCAAGCCCTCGATCTCTTCATACGGCATCGCAGCA
GTGGCGGCTGCCGCATCCTCCATGGCTCTAGCTATGCAACCCGATAATGA
TGGTAGCAGCAGCAGGCTGACAGCATGCCATGCATCGTCCCCGCAAGAAA
CTTCGGCGAAGGAGCAGCAGCAGC back to top
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