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Properties
| Property Name | Value |
|---|
| TranscriptId | 593591 |
| Track | FilteredModels2 |
| ProteinId | 593505 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:339786..342415 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6023 ID=mRNA_6023|Name=jgi.p|Nanoce1779_2|593505|organism=Nannochloropsis oceanica|type=mRNA|length=2312bp
ACAGCTCGCTACAACCATCCAACAAAGCACTATGCCGACTCACATCCTCG
CTGCTGCCGGGCCCCGCAACATGGCCTTGGGATTCTTCCTTCTGGCCTCG
TTCACTTCGACGGCCTGTGCGTTCGCCGCTCCTCGTACTCTCTACGATTT
TTCGCTCAAGGATGCCACGGGCACGACGCAGAGCCTCGCCGCCTACAAAG
ACAAGCCTGTCACGCTGATCGTGAACGTGGCATCTCGTTGCGGATATACC
GACAGTAATTACAAGCAGCTCCAAACTCTTTATGAAAAGTACCAGAAGGA
TGGCTTGCAGATCTTTGCCATGCCCACCAACGAATTTGGAGGACAGGAGC
CGGGCTCTGATGCTGACATCATCAAGTTCACAAAGGACAAATACGCCGTT
ACGTTTCCCGTGTTTAGCAAGCTCAAGGTGAATGGTGGTGATGCTTCAGA
GATCTACCGCTGGCTTAAGTCTGAAACGAAGGACCCGCCTGCTGAAACCA
ATAAAGATATCCGGTGGAATTTTACCAAGTTTTTGCTCGTTAACGGCATG
CCCTACAAGCGTTTTGCCCACGATAAGGCCCCGAAGGATTTTGAATCTGA
CATCGTAACCGCTTTGCGCGCAGCTGCGAATAAGGAGCTATAAGAGAGCA
TTAGTACGTGAGAGAAGGGAGAGGTGTAGACCTCTAGTGGCGCGCAGGAA
GCGAGACCGAGTGACTGAAAGTCTCTCTCCTCGATGGCGGTGGAAAAAGA
AACAGACGTGACATGATTGAAAGCAACTTAGTCAACAGTAAACTTGTTTC
TCATTCATTTCCTTGTTTCTTATTTCCCTATTTCGCTTCGCTTTCGAATT
GATGATTGCCAACAAGAGTGAAATTGGATTGGGATGTGAATAGTGAGTGG
GGGAGACCTGCATAAGTCCTCAATAGGATTAACAAAAGGGTAAACAACTA
AACACATAAGTGAAATTTAAGATTCTTCAAGTCCTTGTTCGGTGCGATGG
GATAAGAGAATCAGTGTCCACAACTGGTGAGCGAATTCTGCCTCTCCCTT
TTCTTCTTCGTCGTCTTCTTCTTCGTAATGTTCCTCTTTTTCCGTACTCG
TCTTTTTCGTATTTTCCGATGTCTTGATCTTCTTGTTCTGCTTCTCGTTG
TTGTTACTCTTGTCATCCTCATCGTCATAGTCATTTCAAATATCTTGCTT
GCCCTCTATCGGTCGCCCGTCCTCCTGTTCCTCACCGAGCCCACTCTCAT
CTCTTCCTTGTTCTGTGTAGATCTTCGCCATCCCAGCGTTCCTTTCCATT
CTTGCGTCTTTGCAGTTCTACTCACAAATCTTTGCTGTTCGTCTCTTTCT
CTTCTCTTCCCTTCAATCAACTCAAGGCGCCTACCGTGAAAGAAGAAATT
GAAATTTTCCTCTTCTTTCTTCTCTCACACGTATCTGAGTTTTTTTTAAC
TTGCGGCTTTTTTTTCAATATTATTTGAATAGTAAATTGAAATTATTTGG
AAGGGTAAATGGATGGGGGATCATAAAAAGCGTTGCATGGAGAAATGAGT
AAAAGTGCAATGCCTTCCCCGTACTTGCTGCTTGAACTGGTCGCCATCGC
GGGATCTTGCTCTTCTCGCTTCTGCCTTTTTCCTCCCACCCGGCTACAGC
CGACATTTTCTCCTCCTGGGGTTGGTCTCTTCCTCAAGTAACCCCCCCTT
CTTCTCTCTCTTCTCTTTCTATTTTTCTCTCATTCATTATGATCCTTCCT
TCCGAATGCACAAACCTAACACAAGAGAACAGGGGAAAAGAGTTCGACCC
CAACCCACTAGCTTACGTAAGCACGCATGCACACACGTACGCTTCCTCAA
AAAGAGCCACGCATATTTATATTTATATAACATATGTAAAGGTCAATTGT
TAAAGGAAATGGATTGAAATGTTGTCTATGTTCATGCTGCTGCTGCTGCT
GCTATTGCAAGCAATGCGCGTCTTCCGGGTATGTAAAAACAAAAAGCGCA
ACGATCGAGACAATCGCTGCTGATGACTCACTGCACACCTCTGAATATCC
CTCCCTCTCTTCCTCCCTTCCTCCCTTGCCTCCGTCCTTTACAGCCCCTC
CAGTGGCGCCAGCAAGTCTTCCAGGTCCTCCATCCCCGCGGCCACCTCGT
TCCCGTCCTCGACCTCCTCGAGATCTACCTCCTCCTTCCGCATTACCATC
CCACTTCCTCCCCCACCCCCACTGCTACTGCTCGGCAACATCGTATGCCG
AAACACTGCTCCCTCCCTCCCCCCCCCCATCCCCGGCATCAAACTGCTTG
CCGACATGTCCC back to topprotein sequence of jgi.p|Nanoce1779_2|593505 >mRNA_6023-protein ID=mRNA_6023-protein|Name=jgi.p|Nanoce1779_2|593505|organism=Nannochloropsis oceanica|type=polypeptide|length=204bp
MPTHILAAAGPRNMALGFFLLASFTSTACAFAAPRTLYDFSLKDATGTTQ
SLAAYKDKPVTLIVNVASRCGYTDSNYKQLQTLYEKYQKDGLQIFAMPTN
EFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETK
DPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTALRAAAN
KEL* back to topmRNA from alignment at scaffold_14:339786..342415- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6023 ID=mRNA_6023|Name=jgi.p|Nanoce1779_2|593505|organism=Nannochloropsis oceanica|type=mRNA|length=2630bp|location=Sequence derived from alignment at scaffold_14:339786..342415- (Nannochloropsis oceanica)
ACAGCTCGCTACAACCATCCAACAAAGCACTATGCCGACTCACATCCTCG
CTGCTGCCGGGCCCCGCAACATGGCCTTGGGATTCTTCCTTCTGGCCTCG
TTCACTTCGACGGCCTGTGCGTTCGCCGCTCCTCGTACTCTCTACGATTT
TTCGCTCAAGGATGCCACGGGCACGACGCAGAGCCTCGCCGCCTACAAAG
ACAAGCCTGTCACGCTGATGTAAGTCTCAAGTCGCTGGTCGGGCCCTTGG
GTTTGGTATTGGAAGGTGCCACTTGTCACCTTCACACCCGCGTCTCTCCC
TTTCTCTTTCATCCGAAAAAACTTCAGCGTGAACGTGGCATCTCGTTGCG
GATATACCGACAGTAATTACAAGCAGCTCCAAACTCTTTATGAAAAGTAC
CAGAAGGATGGCTTGCAGATCTTTGCCATGCCCACCAACGAATTTGGAGG
ACAGGAGCCGGGCTCTGATGCTGACATCATCAAGTTCACAAAGGACAAAT
ACGCCGTTACGTTTCCCGTGTTTAGCAAGCTCAAGGTGAATGGTGGTGAT
GCTTCAGAGATCTACCGCTGGCTTAAGTCTGAAACGAAGGACCCGCCTGC
TGAAACCAATAAAGATATCCGGTGGAATTTTACCAAGGTTCGTTTATTGC
ACCACTTTTGTTGTGCCTGCGTCTGAGTCAGTTTTTTAGCTTGGTAATTA
CGCGACGCCATCCCTTTCCTGAGAATAAGCTGTGGTCTAGAGTCAATGTG
ATGGATATCTGGTTTTTGTCCTTTCCAAGGTTAAACCCCATGGTAGAAAA
ATGCTGATTGGAGCACTTTCACGTACCTTCTCACACTCACATGACAGTTT
TTGCTCGTTAACGGCATGCCCTACAAGCGTTTTGCCCACGATAAGGCCCC
GAAGGATTTTGAATCTGACATCGTAACCGCTTTGCGCGCAGCTGCGAATA
AGGAGCTATAAGAGAGCATTAGTACGTGAGAGAAGGGAGAGGTGTAGACC
TCTAGTGGCGCGCAGGAAGCGAGACCGAGTGACTGAAAGTCTCTCTCCTC
GATGGCGGTGGAAAAAGAAACAGACGTGACATGATTGAAAGCAACTTAGT
CAACAGTAAACTTGTTTCTCATTCATTTCCTTGTTTCTTATTTCCCTATT
TCGCTTCGCTTTCGAATTGATGATTGCCAACAAGAGTGAAATTGGATTGG
GATGTGAATAGTGAGTGGGGGAGACCTGCATAAGTCCTCAATAGGATTAA
CAAAAGGGTAAACAACTAAACACATAAGTGAAATTTAAGATTCTTCAAGT
CCTTGTTCGGTGCGATGGGATAAGAGAATCAGTGTCCACAACTGGTGAGC
GAATTCTGCCTCTCCCTTTTCTTCTTCGTCGTCTTCTTCTTCGTAATGTT
CCTCTTTTTCCGTACTCGTCTTTTTCGTATTTTCCGATGTCTTGATCTTC
TTGTTCTGCTTCTCGTTGTTGTTACTCTTGTCATCCTCATCGTCATAGTC
ATTTCAAATATCTTGCTTGCCCTCTATCGGTCGCCCGTCCTCCTGTTCCT
CACCGAGCCCACTCTCATCTCTTCCTTGTTCTGTGTAGATCTTCGCCATC
CCAGCGTTCCTTTCCATTCTTGCGTCTTTGCAGTTCTACTCACAAATCTT
TGCTGTTCGTCTCTTTCTCTTCTCTTCCCTTCAATCAACTCAAGGCGCCT
ACCGTGAAAGAAGAAATTGAAATTTTCCTCTTCTTTCTTCTCTCACACGT
ATCTGAGTTTTTTTTAACTTGCGGCTTTTTTTTCAATATTATTTGAATAG
TAAATTGAAATTATTTGGAAGGGTAAATGGATGGGGGATCATAAAAAGCG
TTGCATGGAGAAATGAGTAAAAGTGCAATGCCTTCCCCGTACTTGCTGCT
TGAACTGGTCGCCATCGCGGGATCTTGCTCTTCTCGCTTCTGCCTTTTTC
CTCCCACCCGGCTACAGCCGACATTTTCTCCTCCTGGGGTTGGTCTCTTC
CTCAAGTAACCCCCCCTTCTTCTCTCTCTTCTCTTTCTATTTTTCTCTCA
TTCATTATGATCCTTCCTTCCGAATGCACAAACCTAACACAAGAGAACAG
GGGAAAAGAGTTCGACCCCAACCCACTAGCTTACGTAAGCACGCATGCAC
ACACGTACGCTTCCTCAAAAAGAGCCACGCATATTTATATTTATATAACA
TATGTAAAGGTCAATTGTTAAAGGAAATGGATTGAAATGTTGTCTATGTT
CATGCTGCTGCTGCTGCTGCTATTGCAAGCAATGCGCGTCTTCCGGGTAT
GTAAAAACAAAAAGCGCAACGATCGAGACAATCGCTGCTGATGACTCACT
GCACACCTCTGAATATCCCTCCCTCTCTTCCTCCCTTCCTCCCTTGCCTC
CGTCCTTTACAGCCCCTCCAGTGGCGCCAGCAAGTCTTCCAGGTCCTCCA
TCCCCGCGGCCACCTCGTTCCCGTCCTCGACCTCCTCGAGATCTACCTCC
TCCTTCCGCATTACCATCCCACTTCCTCCCCCACCCCCACTGCTACTGCT
CGGCAACATCGTATGCCGAAACACTGCTCCCTCCCTCCCCCCCCCCATCC
CCGGCATCAAACTGCTTGCCGACATGTCCC back to topCoding sequence (CDS) from alignment at scaffold_14:339786..342415- >mRNA_6023 ID=mRNA_6023|Name=jgi.p|Nanoce1779_2|593505|organism=Nannochloropsis oceanica|type=CDS|length=1836bp|location=Sequence derived from alignment at scaffold_14:339786..342415- (Nannochloropsis oceanica)
TTTTTGCTCGTTAACGGCATGCCCTACAAGCGTTTTGCCCACGATAAGGC
CCCGAAGGATTTTGAATCTGACATCGTAACCGCTTTGCGCGCAGCTGCGA
ATAAGGAGCTATAACGTGAACGTGGCATCTCGTTGCGGATATACCGACAG
TAATTACAAGCAGCTCCAAACTCTTTATGAAAAGTACCAGAAGGATGGCT
TGCAGATCTTTGCCATGCCCACCAACGAATTTGGAGGACAGGAGCCGGGC
TCTGATGCTGACATCATCAAGTTCACAAAGGACAAATACGCCGTTACGTT
TCCCGTGTTTAGCAAGCTCAAGGTGAATGGTGGTGATGCTTCAGAGATCT
ACCGCTGGCTTAAGTCTGAAACGAAGGACCCGCCTGCTGAAACCAATAAA
GATATCCGGTGGAATTTTACCAAGATGCCGACTCACATCCTCGCTGCTGC
CGGGCCCCGCAACATGGCCTTGGGATTCTTCCTTCTGGCCTCGTTCACTT
CGACGGCCTGTGCGTTCGCCGCTCCTCGTACTCTCTACGATTTTTCGCTC
AAGGATGCCACGGGCACGACGCAGAGCCTCGCCGCCTACAAAGACAAGCC
TGTCACGCTGATTTTTTGCTCGTTAACGGCATGCCCTACAAGCGTTTTGC
CCACGATAAGGCCCCGAAGGATTTTGAATCTGACATCGTAACCGCTTTGC
GCGCAGCTGCGAATAAGGAGCTATAACGTGAACGTGGCATCTCGTTGCGG
ATATACCGACAGTAATTACAAGCAGCTCCAAACTCTTTATGAAAAGTACC
AGAAGGATGGCTTGCAGATCTTTGCCATGCCCACCAACGAATTTGGAGGA
CAGGAGCCGGGCTCTGATGCTGACATCATCAAGTTCACAAAGGACAAATA
CGCCGTTACGTTTCCCGTGTTTAGCAAGCTCAAGGTGAATGGTGGTGATG
CTTCAGAGATCTACCGCTGGCTTAAGTCTGAAACGAAGGACCCGCCTGCT
GAAACCAATAAAGATATCCGGTGGAATTTTACCAAGATGCCGACTCACAT
CCTCGCTGCTGCCGGGCCCCGCAACATGGCCTTGGGATTCTTCCTTCTGG
CCTCGTTCACTTCGACGGCCTGTGCGTTCGCCGCTCCTCGTACTCTCTAC
GATTTTTCGCTCAAGGATGCCACGGGCACGACGCAGAGCCTCGCCGCCTA
CAAAGACAAGCCTGTCACGCTGATTTTTTGCTCGTTAACGGCATGCCCTA
CAAGCGTTTTGCCCACGATAAGGCCCCGAAGGATTTTGAATCTGACATCG
TAACCGCTTTGCGCGCAGCTGCGAATAAGGAGCTATAACGTGAACGTGGC
ATCTCGTTGCGGATATACCGACAGTAATTACAAGCAGCTCCAAACTCTTT
ATGAAAAGTACCAGAAGGATGGCTTGCAGATCTTTGCCATGCCCACCAAC
GAATTTGGAGGACAGGAGCCGGGCTCTGATGCTGACATCATCAAGTTCAC
AAAGGACAAATACGCCGTTACGTTTCCCGTGTTTAGCAAGCTCAAGGTGA
ATGGTGGTGATGCTTCAGAGATCTACCGCTGGCTTAAGTCTGAAACGAAG
GACCCGCCTGCTGAAACCAATAAAGATATCCGGTGGAATTTTACCAAGAT
GCCGACTCACATCCTCGCTGCTGCCGGGCCCCGCAACATGGCCTTGGGAT
TCTTCCTTCTGGCCTCGTTCACTTCGACGGCCTGTGCGTTCGCCGCTCCT
CGTACTCTCTACGATTTTTCGCTCAAGGATGCCACGGGCACGACGCAGAG
CCTCGCCGCCTACAAAGACAAGCCTGTCACGCTGAT back to top
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