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Properties
| Property Name | Value |
|---|
| TranscriptId | 593541 |
| Track | FilteredModels2 |
| ProteinId | 593455 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:291244..292807 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6007 ID=mRNA_6007|Name=jgi.p|Nanoce1779_2|593455|organism=Nannochloropsis oceanica|type=mRNA|length=1564bp
TATCCTTCGAGAAGGAATGGCACACGCCGTCGCCGATACGACTTGGCAAG
ACCATATTCATTTGCCTTTGTTTGGGCGCGACAGCCAAAGTTTTTGAATA
TGTAAACGATATATTATCTATTCTATACAAAAACATATCCGTCTGGTATG
GTAGGGAAAAGTGCGAGGTCGGTCATCATCGGAGGGCACTGAAGACACAT
GGGAACAAAGGAGGTGTCAGGGAGGGAGGAGGTTGAAATTTGGGAAGGCG
CATTTGTAGCTCCGATATGAGCTATGTAAGAAGCATTGATTATTATTTTT
ACTCATAAACTTGACTCGATACCCACGAATGGACTTTTCTCGGTATATAC
ATACATATACACGTATACATATAATGAGACAGGGAGGTTTTAAACAGTAG
GCCCGTTTTACCTGGCTTTCCCCACCAAAAAAACGCTGCGAGATATTTTA
TTTTGCGTCAATTTGTGTGTATGTGTGCCTTTTCCATGCCTTCTAATCTT
TTTTGTATCCGTTAGCCAAATAGCACTCCCTGCAGTAATGATCGTCGTCG
AACGGCAAGAGTCCTTTTTCGCATCCCGCCAGTTCCACCAAAGACGGCAC
GTATCTTTCACACGACCCTCCCCCCGCCCCCGCCTTCTTCCACGGACTAC
AACGCTGCCCCAGCAAACTTATGCTCGAAGCCTGTCTTCCCCTATCCTTG
CTTCACGTTCAGTTTTCCAAGCTATAAGGTCGTTGCGACCCCAATTTTCA
CGACCACGGCCCGCATGGGCCCTGCCAGCTCCACAGACAAAAACCATGCA
CGAGGCGAGCGAACCCCACAAATACGAGGACAGCGAGACCGAGGCTGAGG
TGGAGGCTCTGCTTTCCTTTGCAGAAGAGCTGGGTGTGGAAGGCTTGGAA
GAGGATATGGATGTCCTGGCACCTTCCCCTTCGCCTCCTTCGCGCCCCTC
GCAGGCGTCAACACCATCACCACAAGCACGCACTTCCCCGTCAGCGGAAA
GACTACATCAGACTTCCAACTTGGACAGTTTAACTTCCAAAAGGCAGCCA
ACACCGCCATGTTCCCCTGTTATTCAAGCTCTACCTCTTGCAAAATCATC
GGCGTTAGGACCAACACGAACATCTGCCGGCACCATTCATTCCGCACGGT
CAGTGGCAGCTCTGATGGAACACCGCACTCTTGCCGCCTTCGTGGCCGCT
GAAGACAGGTGCTGACATACAGTGAAAGAGAGGGGAATGCCACTGTTCCT
TGAACATCGCTTATCACCAGTGGTGCGGCGAAGTAGTGAGGGAGGGAAAG
GGGAAGCTGCAGACGTGCAAAACCAGAAAGAGCGGGAAAGGTTCTTCGGG
CAGACAGCAGGAGGACAAGGTGGGGGAAGGCCTTCGGAGATGCCACGGTT
GGTGATAATTGACGAGGAAGGGGGCTTGCGTCGACAGAGGCGGTTGACAC
AATTGCCATACTGGCATGAGAACCCAGCACTGTAGGATATGATTAGATCA
AGATAAAATAAAACTGTAGTATAAAAAAAAGGCTAAGATAAAGACAAAAC
TGTACGATAAGATT back to topprotein sequence of jgi.p|Nanoce1779_2|593455 >mRNA_6007-protein ID=mRNA_6007-protein|Name=jgi.p|Nanoce1779_2|593455|organism=Nannochloropsis oceanica|type=polypeptide|length=226bp
MIVVERQESFFASRQFHQRRHVSFTRPSPRPRLLPRTTTLPQQTYARSLS
SPILASRSVFQAIRSLRPQFSRPRPAWALPAPQTKTMHEASEPHKYEDSE
TEAEVEALLSFAEELGVEGLEEDMDVLAPSPSPPSRPSQASTPSPQARTS
PSAERLHQTSNLDSLTSKRQPTPPCSPVIQALPLAKSSALGPTRTSAGTI
HSARSVAALMEHRTLAAFVAAEDRC* back to topmRNA from alignment at scaffold_14:291244..292807- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6007 ID=mRNA_6007|Name=jgi.p|Nanoce1779_2|593455|organism=Nannochloropsis oceanica|type=mRNA|length=1564bp|location=Sequence derived from alignment at scaffold_14:291244..292807- (Nannochloropsis oceanica)
TATCCTTCGAGAAGGAATGGCACACGCCGTCGCCGATACGACTTGGCAAG
ACCATATTCATTTGCCTTTGTTTGGGCGCGACAGCCAAAGTTTTTGAATA
TGTAAACGATATATTATCTATTCTATACAAAAACATATCCGTCTGGTATG
GTAGGGAAAAGTGCGAGGTCGGTCATCATCGGAGGGCACTGAAGACACAT
GGGAACAAAGGAGGTGTCAGGGAGGGAGGAGGTTGAAATTTGGGAAGGCG
CATTTGTAGCTCCGATATGAGCTATGTAAGAAGCATTGATTATTATTTTT
ACTCATAAACTTGACTCGATACCCACGAATGGACTTTTCTCGGTATATAC
ATACATATACACGTATACATATAATGAGACAGGGAGGTTTTAAACAGTAG
GCCCGTTTTACCTGGCTTTCCCCACCAAAAAAACGCTGCGAGATATTTTA
TTTTGCGTCAATTTGTGTGTATGTGTGCCTTTTCCATGCCTTCTAATCTT
TTTTGTATCCGTTAGCCAAATAGCACTCCCTGCAGTAATGATCGTCGTCG
AACGGCAAGAGTCCTTTTTCGCATCCCGCCAGTTCCACCAAAGACGGCAC
GTATCTTTCACACGACCCTCCCCCCGCCCCCGCCTTCTTCCACGGACTAC
AACGCTGCCCCAGCAAACTTATGCTCGAAGCCTGTCTTCCCCTATCCTTG
CTTCACGTTCAGTTTTCCAAGCTATAAGGTCGTTGCGACCCCAATTTTCA
CGACCACGGCCCGCATGGGCCCTGCCAGCTCCACAGACAAAAACCATGCA
CGAGGCGAGCGAACCCCACAAATACGAGGACAGCGAGACCGAGGCTGAGG
TGGAGGCTCTGCTTTCCTTTGCAGAAGAGCTGGGTGTGGAAGGCTTGGAA
GAGGATATGGATGTCCTGGCACCTTCCCCTTCGCCTCCTTCGCGCCCCTC
GCAGGCGTCAACACCATCACCACAAGCACGCACTTCCCCGTCAGCGGAAA
GACTACATCAGACTTCCAACTTGGACAGTTTAACTTCCAAAAGGCAGCCA
ACACCGCCATGTTCCCCTGTTATTCAAGCTCTACCTCTTGCAAAATCATC
GGCGTTAGGACCAACACGAACATCTGCCGGCACCATTCATTCCGCACGGT
CAGTGGCAGCTCTGATGGAACACCGCACTCTTGCCGCCTTCGTGGCCGCT
GAAGACAGGTGCTGACATACAGTGAAAGAGAGGGGAATGCCACTGTTCCT
TGAACATCGCTTATCACCAGTGGTGCGGCGAAGTAGTGAGGGAGGGAAAG
GGGAAGCTGCAGACGTGCAAAACCAGAAAGAGCGGGAAAGGTTCTTCGGG
CAGACAGCAGGAGGACAAGGTGGGGGAAGGCCTTCGGAGATGCCACGGTT
GGTGATAATTGACGAGGAAGGGGGCTTGCGTCGACAGAGGCGGTTGACAC
AATTGCCATACTGGCATGAGAACCCAGCACTGTAGGATATGATTAGATCA
AGATAAAATAAAACTGTAGTATAAAAAAAAGGCTAAGATAAAGACAAAAC
TGTACGATAAGATT back to topCoding sequence (CDS) from alignment at scaffold_14:291244..292807- >mRNA_6007 ID=mRNA_6007|Name=jgi.p|Nanoce1779_2|593455|organism=Nannochloropsis oceanica|type=CDS|length=678bp|location=Sequence derived from alignment at scaffold_14:291244..292807- (Nannochloropsis oceanica)
ATGATCGTCGTCGAACGGCAAGAGTCCTTTTTCGCATCCCGCCAGTTCCA
CCAAAGACGGCACGTATCTTTCACACGACCCTCCCCCCGCCCCCGCCTTC
TTCCACGGACTACAACGCTGCCCCAGCAAACTTATGCTCGAAGCCTGTCT
TCCCCTATCCTTGCTTCACGTTCAGTTTTCCAAGCTATAAGGTCGTTGCG
ACCCCAATTTTCACGACCACGGCCCGCATGGGCCCTGCCAGCTCCACAGA
CAAAAACCATGCACGAGGCGAGCGAACCCCACAAATACGAGGACAGCGAG
ACCGAGGCTGAGGTGGAGGCTCTGCTTTCCTTTGCAGAAGAGCTGGGTGT
GGAAGGCTTGGAAGAGGATATGGATGTCCTGGCACCTTCCCCTTCGCCTC
CTTCGCGCCCCTCGCAGGCGTCAACACCATCACCACAAGCACGCACTTCC
CCGTCAGCGGAAAGACTACATCAGACTTCCAACTTGGACAGTTTAACTTC
CAAAAGGCAGCCAACACCGCCATGTTCCCCTGTTATTCAAGCTCTACCTC
TTGCAAAATCATCGGCGTTAGGACCAACACGAACATCTGCCGGCACCATT
CATTCCGCACGGTCAGTGGCAGCTCTGATGGAACACCGCACTCTTGCCGC
CTTCGTGGCCGCTGAAGACAGGTGCTGA back to top
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