Properties
Property Name | Value |
TranscriptId | 593508 |
Track | FilteredModels2 |
ProteinId | 593422 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_14 | supercontig | scaffold_14:265082..266546 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5992 ID=mRNA_5992|Name=jgi.p|Nanoce1779_2|593422|organism=Nannochloropsis oceanica|type=mRNA|length=1134bp AAAGAAGGAAAAAAAAAAAAAAAAAAAGGGAGAGAGAGAGAGAGGCGAAG ACGGGAGAGACGAAAAGAAAAATGATGTCTGAGTAGAGGATTGAAGGCAG CCTAGGCAGAGCATTAATGAAGATTAAACCAAGATTGACACAAAGGAATA ACAAGATAACAAGAGTTATGTTCATGCCAAGCAGAGCGGACGTATCCTAC ATTCACCATCGTTCGTTTAAAACCGAGAATTTGACCGTACCATTAAAATA AGGGCACAAAACATAACACCAAGTGTGAAGTGCACACAACACTCACATAC ACACAAACGGAAAGCATAGCGAGAGAGGAAAGACAAAATGGGAGCATTGC TGTTGTTGCGGTGTTGGTGTTCTCTTTCTATATCAGAGCCCTTCGGATAC CTCATTACGACAGCCCTTCCTCGCCCTGGCACGACCACTACAGCTCCAAC CAGCACCCACAGACGAGACCGATCGAGACAACAAGACGAGAAATTAAAAA TAAAACCAATCCTCTTTCTCCCTTCCCTCCTCTGTCCCCGTCATTTCTTC TTGCTGGCGTGGGGGGGAGAAATTGGCCCGTATCATAGCAAGCGAAATCA GACACTCTGTCTCAAGACTTGCCTCGACTCTCATCACACGGCCTGCTTTC TTTTTTGTTTCCTCTTTTACTGTATCATCTCCCCTGGTTGCGTGATTGGA TTGTGGTGGTGGCGGTGATGTCGAAATAGCCTGCTAACGGACCATTTACT TGCGCTCCGAGTCCTGGTATCCGTTGAAGAACTCCTCGTTGTCCTGCTTG TTGGACCAGCTCGAGAAGAGGAAGGCAAAGGCGGCGCCGATGGAAGCGAT GATAGGCAGGATACGAGGATCATCCACGCCGAGCACCTCGCCAGTGCCCT CGGTGGCAAAGACGGGGGAGGCAAGGATGAGGGGCGTGAGGCCCGCCAGG GCGGACTTTCCGGTCTTGACCACCTCGGTCATCTTGTTGTTTGTGGCAGA CATCTTGATCGCCTGGCGAGTACGGAGGGGGCCAGTGGGCATGAAGCCCA GGGCGGCCTGCATGCACACCAAGAGGATAGCGAGGGAGAAGAAGACCTTC ATCTTGACTGGGAGTGGGGTGGTGGGTGGACTGT back to topprotein sequence of jgi.p|Nanoce1779_2|593422 >mRNA_5992-protein ID=mRNA_5992-protein|Name=jgi.p|Nanoce1779_2|593422|organism=Nannochloropsis oceanica|type=polypeptide|length=127bp MGALLLLRCWCSLSISEPFGYLITTALPRPGTTTTAPTSTHRRDRSRQQD EKLKIKPILFLPSLLCPRHFFLLAWGGEIGPYHSKRNQTLCLKTCLDSHH TACFLFCFLFYCIISPGCVIGLWWWR* back to topmRNA from alignment at scaffold_14:265082..266546+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5992 ID=mRNA_5992|Name=jgi.p|Nanoce1779_2|593422|organism=Nannochloropsis oceanica|type=mRNA|length=1465bp|location=Sequence derived from alignment at scaffold_14:265082..266546+ (Nannochloropsis oceanica) AAAGAAGGAAAAAAAAAAAAAAAAAAAGGGAGAGAGAGAGAGAGGCGAAG
ACGGGAGAGACGAAAAGAAAAATGATGTCTGAGTAGAGGATTGAAGGCAG
CCTAGGCAGAGCATTAATGAAGATTAAACCAAGATTGACACAAAGGAATA
ACAAGATAACAAGAGTTATGTTCATGCCAAGCAGAGCGGACGTATCCTAC
ATTCACCATCGTTCGTTTAAAACCGAGAATTTGACCGTACCATTAAAATA
AGGGCACAAAACATAACACCAAGTGTGAAGTGCACACAACACTCACATAC
ACACAAACGGAAAGCATAGCGAGAGAGGAAAGACAAAATGGGAGCATTGC
TGTTGTTGCGGTGTTGGTGTTCTCTTTCTATATCAGAGCCCTTCGGATAC
CTCATTACGACAGCCCTTCCTCGCCCTGGCACGACCACTACAGCTCCAAC
CAGCACCCACAGACGAGACCGATCGAGACAACAAGACGAGAAATTAAAAA
TAAAACCAATCCTCTTTCTCCCTTCCCTCCTCTGTCCCCGTCATTTCTTC
TTGCTGGCGTGGGGGGGAGAAATTGGCCCGTATCATAGCAAGCGAAATCA
GACACTCTGTCTCAAGACTTGCCTCGACTCTCATCACACGGCCTGCTTTC
TTTTTTGTTTCCTCTTTTACTGTATCATCTCCCCTGGTTGCGTGATTGGA
TTGTGGTGGTGGCGGTGATGTCGAAATAGCCTGCTAACGGACCATTTACT
GTCATGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGGGGACAGGAATG
AGTGAGAGGTGTAGGCGGTCGATGCGCCCACACTGCTCATTTCCCACTCG
TTCCCTTGAAACCAGCAATTCCCCATATCTTTTCAATCCCCCATCCCTCC
TATCCGCCTCCCGTGTTCAATTTTCTATCCCAAACATACCTTGCGCTCCG
AGTCCTGGTATCCGTTGAAGAACTCCTCGTTGTCCTGCTTGTTGGACCAG
CTCGAGAAGAGGAAGGCAAAGGCGGCGCCGATGGAAGCGATGATAGGCAG
GATACGAGGATCATCCACGCCGAGCACCTTGTGATTGGGAGGAGGAAGAA
GGGAACGGGGGCAGAAGCGAATAAGCATCTCATGCCTGCTGAGGGCAACA
GAGCATCGAATAGTCGCGGCAGTGTCGGTATCCCCCTCTTTCCCCACTCT
TCAAAAAGGACACATACCTCGCCAGTGCCCTCGGTGGCAAAGACGGGGGA
GGCAAGGATGAGGGGCGTGAGGCCCGCCAGGGCGGACTTTCCGGTCTTGA
CCACCTCGGTCATCTTGTTGTTTGTGGCAGACATCTTGATCGCCTGGCGA
GTACGGAGGGGGCCAGTGGGCATGAAGCCCAGGGCGGCCTGCATGCACAC
CAAGAGGATAGCGAGGGAGAAGAAGACCTTCATCTTGACTGGGAGTGGGG
TGGTGGGTGGACTGT back to topCoding sequence (CDS) from alignment at scaffold_14:265082..266546+ >mRNA_5992 ID=mRNA_5992|Name=jgi.p|Nanoce1779_2|593422|organism=Nannochloropsis oceanica|type=CDS|length=381bp|location=Sequence derived from alignment at scaffold_14:265082..266546+ (Nannochloropsis oceanica) ATGGGAGCATTGCTGTTGTTGCGGTGTTGGTGTTCTCTTTCTATATCAGA GCCCTTCGGATACCTCATTACGACAGCCCTTCCTCGCCCTGGCACGACCA CTACAGCTCCAACCAGCACCCACAGACGAGACCGATCGAGACAACAAGAC GAGAAATTAAAAATAAAACCAATCCTCTTTCTCCCTTCCCTCCTCTGTCC CCGTCATTTCTTCTTGCTGGCGTGGGGGGGAGAAATTGGCCCGTATCATA GCAAGCGAAATCAGACACTCTGTCTCAAGACTTGCCTCGACTCTCATCAC ACGGCCTGCTTTCTTTTTTGTTTCCTCTTTTACTGTATCATCTCCCCTGG TTGCGTGATTGGATTGTGGTGGTGGCGGTGA back to top
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