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Properties
| Property Name | Value |
|---|
| TranscriptId | 649259 |
| Track | FilteredModels2 |
| ProteinId | 649173 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:243991..245833 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5985 ID=mRNA_5985|Name=jgi.p|Nanoce1779_2|649173|organism=Nannochloropsis oceanica|type=mRNA|length=1447bp
ATGAGGACAGATGACTTGCCGACGCTCCGCCAAACGTTGCAGGTTCTTGA
GCAACAGCACGCGGCGCTCGATGCAGAGGAGCAGATGATCGAGTCTGAGA
TCAAAAAGAAGAAAATTGAGGTGAACCGGAACGAGGCCCGGCTCAAGAGC
TTGCAGACCGTAAGCCCGGCATTCATGGGAGAATACACACTCCTCGAAGA
AGAGCTCGAGAAACAGTATGAGGTGTACGTGCGGCGTTTCCGGAACGTGG
AGTACTTAGAGCATGAACTTGACAGGCTCCGCGTGGCGGAACACGCCAAG
CAAGCGCGCGCGGAGAGGCGGCTTAGAAGGATGCAACAAGAAGTGCAGGC
AGAGGAGGAACGAAGGCTGGGAAGAGGTGGAAAAAAGGCAGGAGTTCAAG
GTGGAAGCAAAGGAGGTGGCGGTGTGTTTGCCAAGGATTACGACTACCGT
TTGGGGGGCGACAGCAATAAAGCCAGCAGCAGTAGCATAAGGAGAGCAAG
AAGCACGGCCAGATCCGTCATCCGATCCCAACAACCATCACCACCACCCT
CCTCCTCTTCAAGCCATCAACCAGTGGAACACCTGTATCAATACCCACAG
CACGCTCAAATCTTGGGACCAGGCAATCGGAAGGCCTCCACCGCCTCTTC
AATTCTTGACATGGGGACTAAGCGTTCCTCGCCTTCCTCATTGGGTGAGG
ACACGGAAGGGACTTTGGAGGGTGGGGGGGAAGAGGATAGTGAGGAAGAA
GAGGAGATAGAGGAGGATGATTCGTCTTTGTTGCCAGCGGAGGAGGAAGA
GGATGAGCAGGACGACGAGGAAAGGGAAAAGGGGACAAAGGGGGGGGAGG
GCTTTTACCACCAGATGGAGGAAGACGATTTTTGAGAAGACAGCGAGCTA
GCATGCAAAGAAAATAATGGTAGAAGTTGTAGATTCTTTGTTGAGCTGAT
TTTGTTTCTTCGTCGGCGTGCGTTGAAAACCAAAAACGGAAGGGAATGTA
GGCCCGGAATCGAAGCATGGGCCGCCAGACAAGGTGAAACATATACTCTC
ACCACCTGCCTCCGAGGAAAATGCGAGAAGCACGAGCTCCCCCCAGGCGG
TGTTCGCACAAAGACTTTGTAGTCTATGTCAGACTGGTGCATTTGACGAC
ATGACAAGGCTCCTTATCAGCTAGATACGAAGGACTGAGCATATGCAACC
ACACGTCCACAATTGCATTTGTCTGTTTACCTTCTTCCTTTCAGTCGTCA
ACAAACCCCGCAAAACAAGTGGCACAGGGCAACAAGAGGACCACCAACAA
GGAAAGTCATGGGAGAGCAGACAGAGCTCAAGACTGTCAAGGAGCAGGTC
GTCGACCTGGCTGTGACAGAGGGTACGTCCTGCCGGTTCGCCCACCCCTC
TATCCCTTCCTTTCTCTCTCCCTTCCTCCCTATTTCACTCCCTCCCT back to topprotein sequence of jgi.p|Nanoce1779_2|649173 >mRNA_5985-protein ID=mRNA_5985-protein|Name=jgi.p|Nanoce1779_2|649173|organism=Nannochloropsis oceanica|type=polypeptide|length=295bp
MRTDDLPTLRQTLQVLEQQHAALDAEEQMIESEIKKKKIEVNRNEARLKS
LQTVSPAFMGEYTLLEEELEKQYEVYVRRFRNVEYLEHELDRLRVAEHAK
QARAERRLRRMQQEVQAEEERRLGRGGKKAGVQGGSKGGGGVFAKDYDYR
LGGDSNKASSSSIRRARSTARSVIRSQQPSPPPSSSSSHQPVEHLYQYPQ
HAQILGPGNRKASTASSILDMGTKRSSPSSLGEDTEGTLEGGGEEDSEEE
EEIEEDDSSLLPAEEEEDEQDDEEREKGTKGGEGFYHQMEEDDF* back to topmRNA from alignment at scaffold_14:243991..245833- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5985 ID=mRNA_5985|Name=jgi.p|Nanoce1779_2|649173|organism=Nannochloropsis oceanica|type=mRNA|length=1843bp|location=Sequence derived from alignment at scaffold_14:243991..245833- (Nannochloropsis oceanica)
ATGAGGACAGATGACTTGCCGACGCTCCGCCAAACGTTGCAGGTTCTTGA
GCAACAGCACGCGGCGCTCGATGCAGAGGAGCAGATGATCGAGTCTGAGG
TACGTGGAGTGTTGGCATTGGGGTGGAATCGTCGTGTCGTAGAAGTTCCT
CGAACACATCAAAATCCGTCCACTCTTCCCGCACAGATCAAAAAGAAGAA
AATTGAGGTGAACCGGAACGAGGCCCGGCTCAAGAGCTTGCAGACCGTAA
GGTACATATTTGTTTGTGGCGAGAAAGGAATAAATCGGGTCATTTTCTGA
TCACGCATTCTGGGGTGAGCCCCAACATAAGCTCTCTTCCTTTCTTTCCC
TCTCCCCTCTCACGGCCCCCATCTCACCCCTCTCCCCTCGTACACGACAG
CCCGGCATTCATGGGAGAATACACACTCCTCGAAGAAGAGCTCGAGAAAC
AGTATGAGGTGTACGTGCGGCGTTTCCGGAACGTGGAGTACTTAGAGCAT
GAACTTGACAGGCTCCGCGTGGCGGAACACGCCAAGCAAGCGCGCGCGGA
GAGGCGGCTTAGAAGGATGCAACAAGAAGTGCAGGCAGAGGAGGAACGAA
GGCTGGGAAGAGGTGGAAAAAAGGCAGGAGTTCAAGGTGGAAGCAAAGGA
GGTGGCGGTGTGTTTGCCAAGGTACGTTTTGGGAAGTGGTTGTATTTTGG
CGCAGGGGAGGAGGAATCCTCACTTCGCACTCTTCATCTATACAGGATTA
CGACTACCGTTTGGGGGGCGACAGCAATAAAGCCAGCAGCAGTAGCATAA
GGAGAGCAAGAAGCACGGCCAGGTACGTAAGATGGAAAAGGGGAAAATTG
CGGGAAGTGCATTAATTCATGTGGCCTCTCCTTGCTTCCCATTCCCCTCT
TCTTCCAGATCCGTCATCCGATCCCAACAACCATCACCACCACCCTCCTC
CTCTTCAAGCCATCAACCAGTGGAACACCTGTATCAATACCCACAGCACG
CTCAAATCTTGGGACCAGGCAATCGGAAGGCCTCCACCGCCTCTTCAATT
CTTGACATGGGGACTAAGCGTTCCTCGCCTTCCTCATTGGGTGAGGACAC
GGAAGGGACTTTGGAGGGTGGGGGGGAAGAGGATAGTGAGGAAGAAGAGG
AGATAGAGGAGGATGATTCGTCTTTGTTGCCAGCGGAGGAGGAAGAGGAT
GAGCAGGACGACGAGGAAAGGGAAAAGGGGACAAAGGGGGGGGAGGGCTT
TTACCACCAGATGGAGGAAGACGATTTTTGAGAAGACAGCGAGCTAGCAT
GCAAAGAAAATAATGGTAGAAGTTGTAGATTCTTTGTTGAGCTGATTTTG
TTTCTTCGTCGGCGTGCGTTGAAAACCAAAAACGGAAGGGAATGTAGGCC
CGGAATCGAAGCATGGGCCGCCAGACAAGGTGAAACATATACTCTCACCA
CCTGCCTCCGAGGAAAATGCGAGAAGCACGAGCTCCCCCCAGGCGGTGTT
CGCACAAAGACTTTGTAGTCTATGTCAGACTGGTGCATTTGACGACATGA
CAAGGCTCCTTATCAGCTAGATACGAAGGACTGAGCATATGCAACCACAC
GTCCACAATTGCATTTGTCTGTTTACCTTCTTCCTTTCAGTCGTCAACAA
ACCCCGCAAAACAAGTGGCACAGGGCAACAAGAGGACCACCAACAAGGAA
AGTCATGGGAGAGCAGACAGAGCTCAAGACTGTCAAGGAGCAGGTCGTCG
ACCTGGCTGTGACAGAGGGTACGTCCTGCCGGTTCGCCCACCCCTCTATC
CCTTCCTTTCTCTCTCCCTTCCTCCCTATTTCACTCCCTCCCT back to topCoding sequence (CDS) from alignment at scaffold_14:243991..245833- >mRNA_5985 ID=mRNA_5985|Name=jgi.p|Nanoce1779_2|649173|organism=Nannochloropsis oceanica|type=CDS|length=4425bp|location=Sequence derived from alignment at scaffold_14:243991..245833- (Nannochloropsis oceanica)
ATCCGTCATCCGATCCCAACAACCATCACCACCACCCTCCTCCTCTTCAA
GCCATCAACCAGTGGAACACCTGTATCAATACCCACAGCACGCTCAAATC
TTGGGACCAGGCAATCGGAAGGCCTCCACCGCCTCTTCAATTCTTGACAT
GGGGACTAAGCGTTCCTCGCCTTCCTCATTGGGTGAGGACACGGAAGGGA
CTTTGGAGGGTGGGGGGGAAGAGGATAGTGAGGAAGAAGAGGAGATAGAG
GAGGATGATTCGTCTTTGTTGCCAGCGGAGGAGGAAGAGGATGAGCAGGA
CGACGAGGAAAGGGAAAAGGGGACAAAGGGGGGGGAGGGCTTTTACCACC
AGATGGAGGAAGACGATTTTTGAGATTACGACTACCGTTTGGGGGGCGAC
AGCAATAAAGCCAGCAGCAGTAGCATAAGGAGAGCAAGAAGCACGGCCAG
CCCGGCATTCATGGGAGAATACACACTCCTCGAAGAAGAGCTCGAGAAAC
AGTATGAGGTGTACGTGCGGCGTTTCCGGAACGTGGAGTACTTAGAGCAT
GAACTTGACAGGCTCCGCGTGGCGGAACACGCCAAGCAAGCGCGCGCGGA
GAGGCGGCTTAGAAGGATGCAACAAGAAGTGCAGGCAGAGGAGGAACGAA
GGCTGGGAAGAGGTGGAAAAAAGGCAGGAGTTCAAGGTGGAAGCAAAGGA
GGTGGCGGTGTGTTTGCCAAGATCAAAAAGAAGAAAATTGAGGTGAACCG
GAACGAGGCCCGGCTCAAGAGCTTGCAGACCGTAAGATGAGGACAGATGA
CTTGCCGACGCTCCGCCAAACGTTGCAGGTTCTTGAGCAACAGCACGCGG
CGCTCGATGCAGAGGAGCAGATGATCGAGTCTGAGATCCGTCATCCGATC
CCAACAACCATCACCACCACCCTCCTCCTCTTCAAGCCATCAACCAGTGG
AACACCTGTATCAATACCCACAGCACGCTCAAATCTTGGGACCAGGCAAT
CGGAAGGCCTCCACCGCCTCTTCAATTCTTGACATGGGGACTAAGCGTTC
CTCGCCTTCCTCATTGGGTGAGGACACGGAAGGGACTTTGGAGGGTGGGG
GGGAAGAGGATAGTGAGGAAGAAGAGGAGATAGAGGAGGATGATTCGTCT
TTGTTGCCAGCGGAGGAGGAAGAGGATGAGCAGGACGACGAGGAAAGGGA
AAAGGGGACAAAGGGGGGGGAGGGCTTTTACCACCAGATGGAGGAAGACG
ATTTTTGAGATTACGACTACCGTTTGGGGGGCGACAGCAATAAAGCCAGC
AGCAGTAGCATAAGGAGAGCAAGAAGCACGGCCAGCCCGGCATTCATGGG
AGAATACACACTCCTCGAAGAAGAGCTCGAGAAACAGTATGAGGTGTACG
TGCGGCGTTTCCGGAACGTGGAGTACTTAGAGCATGAACTTGACAGGCTC
CGCGTGGCGGAACACGCCAAGCAAGCGCGCGCGGAGAGGCGGCTTAGAAG
GATGCAACAAGAAGTGCAGGCAGAGGAGGAACGAAGGCTGGGAAGAGGTG
GAAAAAAGGCAGGAGTTCAAGGTGGAAGCAAAGGAGGTGGCGGTGTGTTT
GCCAAGATCAAAAAGAAGAAAATTGAGGTGAACCGGAACGAGGCCCGGCT
CAAGAGCTTGCAGACCGTAAGATGAGGACAGATGACTTGCCGACGCTCCG
CCAAACGTTGCAGGTTCTTGAGCAACAGCACGCGGCGCTCGATGCAGAGG
AGCAGATGATCGAGTCTGAGATCCGTCATCCGATCCCAACAACCATCACC
ACCACCCTCCTCCTCTTCAAGCCATCAACCAGTGGAACACCTGTATCAAT
ACCCACAGCACGCTCAAATCTTGGGACCAGGCAATCGGAAGGCCTCCACC
GCCTCTTCAATTCTTGACATGGGGACTAAGCGTTCCTCGCCTTCCTCATT
GGGTGAGGACACGGAAGGGACTTTGGAGGGTGGGGGGGAAGAGGATAGTG
AGGAAGAAGAGGAGATAGAGGAGGATGATTCGTCTTTGTTGCCAGCGGAG
GAGGAAGAGGATGAGCAGGACGACGAGGAAAGGGAAAAGGGGACAAAGGG
GGGGGAGGGCTTTTACCACCAGATGGAGGAAGACGATTTTTGAGATTACG
ACTACCGTTTGGGGGGCGACAGCAATAAAGCCAGCAGCAGTAGCATAAGG
AGAGCAAGAAGCACGGCCAGCCCGGCATTCATGGGAGAATACACACTCCT
CGAAGAAGAGCTCGAGAAACAGTATGAGGTGTACGTGCGGCGTTTCCGGA
ACGTGGAGTACTTAGAGCATGAACTTGACAGGCTCCGCGTGGCGGAACAC
GCCAAGCAAGCGCGCGCGGAGAGGCGGCTTAGAAGGATGCAACAAGAAGT
GCAGGCAGAGGAGGAACGAAGGCTGGGAAGAGGTGGAAAAAAGGCAGGAG
TTCAAGGTGGAAGCAAAGGAGGTGGCGGTGTGTTTGCCAAGATCAAAAAG
AAGAAAATTGAGGTGAACCGGAACGAGGCCCGGCTCAAGAGCTTGCAGAC
CGTAAGATGAGGACAGATGACTTGCCGACGCTCCGCCAAACGTTGCAGGT
TCTTGAGCAACAGCACGCGGCGCTCGATGCAGAGGAGCAGATGATCGAGT
CTGAGATCCGTCATCCGATCCCAACAACCATCACCACCACCCTCCTCCTC
TTCAAGCCATCAACCAGTGGAACACCTGTATCAATACCCACAGCACGCTC
AAATCTTGGGACCAGGCAATCGGAAGGCCTCCACCGCCTCTTCAATTCTT
GACATGGGGACTAAGCGTTCCTCGCCTTCCTCATTGGGTGAGGACACGGA
AGGGACTTTGGAGGGTGGGGGGGAAGAGGATAGTGAGGAAGAAGAGGAGA
TAGAGGAGGATGATTCGTCTTTGTTGCCAGCGGAGGAGGAAGAGGATGAG
CAGGACGACGAGGAAAGGGAAAAGGGGACAAAGGGGGGGGAGGGCTTTTA
CCACCAGATGGAGGAAGACGATTTTTGAGATTACGACTACCGTTTGGGGG
GCGACAGCAATAAAGCCAGCAGCAGTAGCATAAGGAGAGCAAGAAGCACG
GCCAGCCCGGCATTCATGGGAGAATACACACTCCTCGAAGAAGAGCTCGA
GAAACAGTATGAGGTGTACGTGCGGCGTTTCCGGAACGTGGAGTACTTAG
AGCATGAACTTGACAGGCTCCGCGTGGCGGAACACGCCAAGCAAGCGCGC
GCGGAGAGGCGGCTTAGAAGGATGCAACAAGAAGTGCAGGCAGAGGAGGA
ACGAAGGCTGGGAAGAGGTGGAAAAAAGGCAGGAGTTCAAGGTGGAAGCA
AAGGAGGTGGCGGTGTGTTTGCCAAGATCAAAAAGAAGAAAATTGAGGTG
AACCGGAACGAGGCCCGGCTCAAGAGCTTGCAGACCGTAAGATGAGGACA
GATGACTTGCCGACGCTCCGCCAAACGTTGCAGGTTCTTGAGCAACAGCA
CGCGGCGCTCGATGCAGAGGAGCAGATGATCGAGTCTGAGATCCGTCATC
CGATCCCAACAACCATCACCACCACCCTCCTCCTCTTCAAGCCATCAACC
AGTGGAACACCTGTATCAATACCCACAGCACGCTCAAATCTTGGGACCAG
GCAATCGGAAGGCCTCCACCGCCTCTTCAATTCTTGACATGGGGACTAAG
CGTTCCTCGCCTTCCTCATTGGGTGAGGACACGGAAGGGACTTTGGAGGG
TGGGGGGGAAGAGGATAGTGAGGAAGAAGAGGAGATAGAGGAGGATGATT
CGTCTTTGTTGCCAGCGGAGGAGGAAGAGGATGAGCAGGACGACGAGGAA
AGGGAAAAGGGGACAAAGGGGGGGGAGGGCTTTTACCACCAGATGGAGGA
AGACGATTTTTGAGATTACGACTACCGTTTGGGGGGCGACAGCAATAAAG
CCAGCAGCAGTAGCATAAGGAGAGCAAGAAGCACGGCCAGCCCGGCATTC
ATGGGAGAATACACACTCCTCGAAGAAGAGCTCGAGAAACAGTATGAGGT
GTACGTGCGGCGTTTCCGGAACGTGGAGTACTTAGAGCATGAACTTGACA
GGCTCCGCGTGGCGGAACACGCCAAGCAAGCGCGCGCGGAGAGGCGGCTT
AGAAGGATGCAACAAGAAGTGCAGGCAGAGGAGGAACGAAGGCTGGGAAG
AGGTGGAAAAAAGGCAGGAGTTCAAGGTGGAAGCAAAGGAGGTGGCGGTG
TGTTTGCCAAGATCAAAAAGAAGAAAATTGAGGTGAACCGGAACGAGGCC
CGGCTCAAGAGCTTGCAGACCGTAAGATGAGGACAGATGACTTGCCGACG
CTCCGCCAAACGTTGCAGGTTCTTGAGCAACAGCACGCGGCGCTCGATGC
AGAGGAGCAGATGATCGAGTCTGAG back to top
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