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Properties
| Property Name | Value |
|---|
| TranscriptId | 593463 |
| Track | FilteredModels2 |
| ProteinId | 593377 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:242111..244170 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5984 ID=mRNA_5984|Name=jgi.p|Nanoce1779_2|593377|organism=Nannochloropsis oceanica|type=mRNA|length=1432bp
AGTGGCACAGGGCAACAAGAGGACCACCAACAAGGAAAGTCATGGGAGAG
CAGACAGAGCTCAAGACTGTCAAGGAGCAGGTCGTCGACCTGGCTGTGAC
AGAGGGTGTCCGCGCAGGTGTGGGTGCGGGATGCTTGGCAGGCTTGGGGG
TATTTGCGGCCGACAAATACAGTCCTTGGTTTCATAAATCGTTGGGCATC
AGCGGGAAGGTAGGCACGGTCATGATTGCCATTACGGGGAGCTTCTTCCT
TTTCACCGAGCTGGCGCTTGTTGACGCCCAACGTCACCCGAAGGAATACG
GCTTTGACGATTCCCCTGCCCTCATCACCGACGCCGCGACCGCTGCTGCT
GCTGCTGCTGCTGAAGAGGCCAGAATTGCCAAGAGCAGCAATTATGAGAT
GGTCCACTTTAAGCCTCGGTATTTGTTCGCTAAGGCCGCGAATCATTTGT
ACGACCACCCTTTTCAGATGCTGATCGCGATGAGTGCACCGATCATAGGT
GGATTTTTCTACACGGAGATGCAGAAGCCAGGCTTGAAACTGTCGCAACG
CATCATCCACACGCGAGTCCAAGGCCAAGCGTCCGTCATTCTGATTTTGG
CATTAACGATGGGCTTTCGGGAATGGATGACCAAACACGGTGGCCGCATC
CCTTTGGATAAAGAGGACTCGTAAATTAAAATGAAGCGAGTGTGGAGAGC
GGATGGTCAAGAGGAAAGGTGTACATGAAGAGGCAACGGCTGAGGGAGTA
AGAGTGAACATGCATGGCAAGGAAAAGAAAGATTCTGAGGCAGAGGAATG
AGTAGAGGGAGTTTTTCGCAGATATCGAAGTCGAATGCAGGATGTTGGTC
ACACATTTTTGCGTGGTTAGCGTGGTAGTTGAAGGGTGGGCGAGAGAGGG
GAGAAAGTTTACGATGGGACGACGACGACCCAAAAACAAAAACCACAATC
TTATCGACGGTGCACGCATCGAATATTGGCGCCGTCATGAAGTGGTTTCT
AGTTTTTTTGAGGCGCAAAAAAGGCACGAAATGGGCCGGCTGGAGCTGAG
CCACAACATCTTCCCGTGGACCCCCCTCGACCCGCTCGCTTTCCTTCGAC
GCTTCTCTCCCTCTCTCACCCCTTTGCTCTGCTAGATCGCTTCCTTGATA
TGCAGTTGCCCTATCTGACGCTTGTTCACGCCTTGTCTTTCTCAATCATT
TGGGGTGTGGCGTGTGGATGTTCAGTCATAGAGAGCGACGCGACCAAAAG
TTGCCAGGCAAACAATCTCGTTGAAGGCAACCCTGTAGGATTTGCTTCGA
CAGATACCTTCCGTTCCCTCGCTCTATCTCACCCAAGACAACCCCTCCTG
AAACTCTTTTACAGCTTAAACCATGCGTACGGTCACGACGCTTGTGGCGC
TGTCTGCCTTGATGGGAGCAAGTGCCTTCTTG back to topprotein sequence of jgi.p|Nanoce1779_2|593377 >mRNA_5984-protein ID=mRNA_5984-protein|Name=jgi.p|Nanoce1779_2|593377|organism=Nannochloropsis oceanica|type=polypeptide|length=211bp
MGEQTELKTVKEQVVDLAVTEGVRAGVGAGCLAGLGVFAADKYSPWFHKS
LGISGKVGTVMIAITGSFFLFTELALVDAQRHPKEYGFDDSPALITDAAT
AAAAAAAEEARIAKSSNYEMVHFKPRYLFAKAANHLYDHPFQMLIAMSAP
IIGGFFYTEMQKPGLKLSQRIIHTRVQGQASVILILALTMGFREWMTKHG
GRIPLDKEDS* back to topmRNA from alignment at scaffold_14:242111..244170- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5984 ID=mRNA_5984|Name=jgi.p|Nanoce1779_2|593377|organism=Nannochloropsis oceanica|type=mRNA|length=2060bp|location=Sequence derived from alignment at scaffold_14:242111..244170- (Nannochloropsis oceanica)
AGTGGCACAGGGCAACAAGAGGACCACCAACAAGGAAAGTCATGGGAGAG
CAGACAGAGCTCAAGACTGTCAAGGAGCAGGTCGTCGACCTGGCTGTGAC
AGAGGGTACGTCCTGCCGGTTCGCCCACCCCTCTATCCCTTCCTTTCTCT
CTCCCTTCCTCCCTATTTCACTCCCTCCCTTTCCTCCTCTTTCCGACATC
ACTGCTTCCAAATCCTCACATTGCAGGTGTCCGCGCAGGTGTGGGTGCGG
GATGCTTGGCAGGCTTGGGGGTATTTGCGGCCGACAAATACAGTCCTTGG
TAAGTGAAAACGGCCATGTGTGAGTGGCATTGATGTAGGCCATATTCCCC
TTTTAGGGCTACCACCACCACCCATGTTCTCATATACACTCCGCAATCCT
TCGCCTTTTTTGCAGGTTTCATAAATCGTTGGGCATCAGCGGGAAGGTAG
GCACGGTCATGATTGCCATTACGGGGAGCTTCTTCCTTTTCACCGAGCTG
GTACGTAGAAAGAGAGGATGAGGATAATGGGTTTATGAGGGGAGGAGACA
TATTGACTCAGATGGATTATACAATACGACGACTGTTTCTGGTGGGGCTA
CAGGACCCAATGTAATAGCACTGCGTGTGTTATGATTGGCGTAGATTGCC
ATGGCCATTAATGTGTGTCGGTCTCTCGGCATTCCCTTTGTTCTGGGTGT
CTGGTTATCTCTTTCCCCTCTACCCTCTTCCCTCCCTCATCCTCAACATC
CACCTACCTCCATGTCAGGCGCTTGTTGACGCCCAACGTCACCCGAAGGA
ATACGGCTTTGACGATTCCCCTGCCCTCATCACCGACGCCGCGACCGCTG
CTGCTGCTGCTGCTGCTGAAGAGGCCAGAATTGCCAAGAGCAGCAATTAT
GAGATGGTCCACTTTAAGCCTCGGTATTTGTTCGCTAAGGCCGCGAATCA
TTTGTACGACCACCCTTTTCAGATGCTGATCGCGATGAGTGCACCGATCA
TAGGTGGATTTTTCTACACGGAGATGCAGAAGCCAGGTAAGGGAGGGTGG
GAGGGAGGGAGAGAAGGAGTGTTTTATTCACGTGCTTGCTGGTGAGTCCT
CCACGAGTTTTACATGCTGTCTCAATCCATTTTTAATTACTCTTCCCAAT
TAATCACAGGCTTGAAACTGTCGCAACGCATCATCCACACGCGAGTCCAA
GGCCAAGCGTCCGTCATTCTGATTTTGGCATTAACGATGGGCTTTCGGGA
ATGGATGACCAAACACGGTGGCCGCATCCCTTTGGATAAAGAGGACTCGT
AAATTAAAATGAAGCGAGTGTGGAGAGCGGATGGTCAAGAGGAAAGGTGT
ACATGAAGAGGCAACGGCTGAGGGAGTAAGAGTGAACATGCATGGCAAGG
AAAAGAAAGATTCTGAGGCAGAGGAATGAGTAGAGGGAGTTTTTCGCAGA
TATCGAAGTCGAATGCAGGATGTTGGTCACACATTTTTGCGTGGTTAGCG
TGGTAGTTGAAGGGTGGGCGAGAGAGGGGAGAAAGTTTACGATGGGACGA
CGACGACCCAAAAACAAAAACCACAATCTTATCGACGGTGCACGCATCGA
ATATTGGCGCCGTCATGAAGTGGTTTCTAGTTTTTTTGAGGCGCAAAAAA
GGCACGAAATGGGCCGGCTGGAGCTGAGCCACAACATCTTCCCGTGGACC
CCCCTCGACCCGCTCGCTTTCCTTCGACGCTTCTCTCCCTCTCTCACCCC
TTTGCTCTGCTAGATCGCTTCCTTGATATGCAGTTGCCCTATCTGACGCT
TGTTCACGCCTTGTCTTTCTCAATCATTTGGGGTGTGGCGTGTGGATGTT
CAGTCATAGAGAGCGACGCGACCAAAAGTTGCCAGGCAAACAATCTCGTT
GAAGGCAACCCTGTAGGATTTGCTTCGACAGATACCTTCCGTTCCCTCGC
TCTATCTCACCCAAGACAACCCCTCCTGAAACTCTTTTACAGCTTAAACC
ATGCGTACGGTCACGACGCTTGTGGCGCTGTCTGCCTTGATGGGAGCAAG
TGCCTTCTTG back to topCoding sequence (CDS) from alignment at scaffold_14:242111..244170- >mRNA_5984 ID=mRNA_5984|Name=jgi.p|Nanoce1779_2|593377|organism=Nannochloropsis oceanica|type=CDS|length=3165bp|location=Sequence derived from alignment at scaffold_14:242111..244170- (Nannochloropsis oceanica)
GCTTGAAACTGTCGCAACGCATCATCCACACGCGAGTCCAAGGCCAAGCG
TCCGTCATTCTGATTTTGGCATTAACGATGGGCTTTCGGGAATGGATGAC
CAAACACGGTGGCCGCATCCCTTTGGATAAAGAGGACTCGTAAGCGCTTG
TTGACGCCCAACGTCACCCGAAGGAATACGGCTTTGACGATTCCCCTGCC
CTCATCACCGACGCCGCGACCGCTGCTGCTGCTGCTGCTGCTGAAGAGGC
CAGAATTGCCAAGAGCAGCAATTATGAGATGGTCCACTTTAAGCCTCGGT
ATTTGTTCGCTAAGGCCGCGAATCATTTGTACGACCACCCTTTTCAGATG
CTGATCGCGATGAGTGCACCGATCATAGGTGGATTTTTCTACACGGAGAT
GCAGAAGCCAGGTTTCATAAATCGTTGGGCATCAGCGGGAAGGTAGGCAC
GGTCATGATTGCCATTACGGGGAGCTTCTTCCTTTTCACCGAGCTGGTGT
CCGCGCAGGTGTGGGTGCGGGATGCTTGGCAGGCTTGGGGGTATTTGCGG
CCGACAAATACAGTCCTTGATGGGAGAGCAGACAGAGCTCAAGACTGTCA
AGGAGCAGGTCGTCGACCTGGCTGTGACAGAGGGCTTGAAACTGTCGCAA
CGCATCATCCACACGCGAGTCCAAGGCCAAGCGTCCGTCATTCTGATTTT
GGCATTAACGATGGGCTTTCGGGAATGGATGACCAAACACGGTGGCCGCA
TCCCTTTGGATAAAGAGGACTCGTAAGCGCTTGTTGACGCCCAACGTCAC
CCGAAGGAATACGGCTTTGACGATTCCCCTGCCCTCATCACCGACGCCGC
GACCGCTGCTGCTGCTGCTGCTGCTGAAGAGGCCAGAATTGCCAAGAGCA
GCAATTATGAGATGGTCCACTTTAAGCCTCGGTATTTGTTCGCTAAGGCC
GCGAATCATTTGTACGACCACCCTTTTCAGATGCTGATCGCGATGAGTGC
ACCGATCATAGGTGGATTTTTCTACACGGAGATGCAGAAGCCAGGTTTCA
TAAATCGTTGGGCATCAGCGGGAAGGTAGGCACGGTCATGATTGCCATTA
CGGGGAGCTTCTTCCTTTTCACCGAGCTGGTGTCCGCGCAGGTGTGGGTG
CGGGATGCTTGGCAGGCTTGGGGGTATTTGCGGCCGACAAATACAGTCCT
TGATGGGAGAGCAGACAGAGCTCAAGACTGTCAAGGAGCAGGTCGTCGAC
CTGGCTGTGACAGAGGGCTTGAAACTGTCGCAACGCATCATCCACACGCG
AGTCCAAGGCCAAGCGTCCGTCATTCTGATTTTGGCATTAACGATGGGCT
TTCGGGAATGGATGACCAAACACGGTGGCCGCATCCCTTTGGATAAAGAG
GACTCGTAAGCGCTTGTTGACGCCCAACGTCACCCGAAGGAATACGGCTT
TGACGATTCCCCTGCCCTCATCACCGACGCCGCGACCGCTGCTGCTGCTG
CTGCTGCTGAAGAGGCCAGAATTGCCAAGAGCAGCAATTATGAGATGGTC
CACTTTAAGCCTCGGTATTTGTTCGCTAAGGCCGCGAATCATTTGTACGA
CCACCCTTTTCAGATGCTGATCGCGATGAGTGCACCGATCATAGGTGGAT
TTTTCTACACGGAGATGCAGAAGCCAGGTTTCATAAATCGTTGGGCATCA
GCGGGAAGGTAGGCACGGTCATGATTGCCATTACGGGGAGCTTCTTCCTT
TTCACCGAGCTGGTGTCCGCGCAGGTGTGGGTGCGGGATGCTTGGCAGGC
TTGGGGGTATTTGCGGCCGACAAATACAGTCCTTGATGGGAGAGCAGACA
GAGCTCAAGACTGTCAAGGAGCAGGTCGTCGACCTGGCTGTGACAGAGGG
CTTGAAACTGTCGCAACGCATCATCCACACGCGAGTCCAAGGCCAAGCGT
CCGTCATTCTGATTTTGGCATTAACGATGGGCTTTCGGGAATGGATGACC
AAACACGGTGGCCGCATCCCTTTGGATAAAGAGGACTCGTAAGCGCTTGT
TGACGCCCAACGTCACCCGAAGGAATACGGCTTTGACGATTCCCCTGCCC
TCATCACCGACGCCGCGACCGCTGCTGCTGCTGCTGCTGCTGAAGAGGCC
AGAATTGCCAAGAGCAGCAATTATGAGATGGTCCACTTTAAGCCTCGGTA
TTTGTTCGCTAAGGCCGCGAATCATTTGTACGACCACCCTTTTCAGATGC
TGATCGCGATGAGTGCACCGATCATAGGTGGATTTTTCTACACGGAGATG
CAGAAGCCAGGTTTCATAAATCGTTGGGCATCAGCGGGAAGGTAGGCACG
GTCATGATTGCCATTACGGGGAGCTTCTTCCTTTTCACCGAGCTGGTGTC
CGCGCAGGTGTGGGTGCGGGATGCTTGGCAGGCTTGGGGGTATTTGCGGC
CGACAAATACAGTCCTTGATGGGAGAGCAGACAGAGCTCAAGACTGTCAA
GGAGCAGGTCGTCGACCTGGCTGTGACAGAGGGCTTGAAACTGTCGCAAC
GCATCATCCACACGCGAGTCCAAGGCCAAGCGTCCGTCATTCTGATTTTG
GCATTAACGATGGGCTTTCGGGAATGGATGACCAAACACGGTGGCCGCAT
CCCTTTGGATAAAGAGGACTCGTAAGCGCTTGTTGACGCCCAACGTCACC
CGAAGGAATACGGCTTTGACGATTCCCCTGCCCTCATCACCGACGCCGCG
ACCGCTGCTGCTGCTGCTGCTGCTGAAGAGGCCAGAATTGCCAAGAGCAG
CAATTATGAGATGGTCCACTTTAAGCCTCGGTATTTGTTCGCTAAGGCCG
CGAATCATTTGTACGACCACCCTTTTCAGATGCTGATCGCGATGAGTGCA
CCGATCATAGGTGGATTTTTCTACACGGAGATGCAGAAGCCAGGTTTCAT
AAATCGTTGGGCATCAGCGGGAAGGTAGGCACGGTCATGATTGCCATTAC
GGGGAGCTTCTTCCTTTTCACCGAGCTGGTGTCCGCGCAGGTGTGGGTGC
GGGATGCTTGGCAGGCTTGGGGGTATTTGCGGCCGACAAATACAGTCCTT
GATGGGAGAGCAGACAGAGCTCAAGACTGTCAAGGAGCAGGTCGTCGACC
TGGCTGTGACAGAGG back to top
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