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Properties
| Property Name | Value |
| TranscriptId | 543443 |
| Track | FilteredModels2 |
| ProteinId | 543357 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_14 | supercontig | scaffold_14:170223..172023 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5957 ID=mRNA_5957|Name=jgi.p|Nanoce1779_2|543357|organism=Nannochloropsis oceanica|type=mRNA|length=1307bp AGACAGGGCAGGGTAGTCGCCAGAATCACCCGGGCGAGCCACGAAAGCGA AAAAGGAGCTTAGCTGCCTTCTGACTTCGAAGCACCACAGGGTGATGGCC AAGACAACGACCACCACGCCACGGAAGCTTGTGGAATTGCAGTACGAAAA CTTGGTGGCCAACAAAGACTTGTCGGCGGAGATAGAGGAGGCATTTGGTG ATTATGGTCTAGGCATCTTGACCGTCTCCGGTGTCCCGGGCCTCGAAGAA AAGCGCCGGGCCCTCCTTCCCCTCGCCCACCGCTTCGCCTCCCTCCCTCC CGCCCTCACCAAAAAGTACGAACACCCGCAGAGTTTCTATTCCTTCGGAT GGAGCCATGGGAAAGAAACTCTGCAACACGGTCGGCCCGATTGGTTGAAA GGTTCATTTTATGCAAATCCTTTGCACGATAACCCCTCGACAGATCAAGA TTTAATTGACAGATACCCGGCCTTTTTACACCCGAACATATGGCCTTCCA AGGACGTACCAGCGTTGGAATCAGCATTCAAAGACTTGGGGAAGTTGATT GTAGACGTCGGGGCGATGGTTGCCAAGCAGTGTGATGTGTATGTGGGGAG CAAGTGCGCAGGATATGCTAATAATGGCAAAGTAGAGAAAGAGGGAGGGA AGGAGGGCATGGGGAAGTTGGAAAGGGTTGTGAGGGAGTCCAGGGTGTGT AAGGGGAGACTGCTGCATTATTTTCCGTATGTTGCAAAGGAGCAGGAGGA GGAAAAGGGGAAGGAAGGGAAGGGAACCGAAATGTATTTTAGCACCTGGT GTGGCTGGCACAACGATCATGGATCTCTCACGGGATTGACTTCAGCCATG TACTTGGATGTGGAAGGGCGGGAGGTTGATGAAGACGATGGCGGCCTCTA CGCCCTAAGCCGAGGCGGGGAGGTAGTCAAAATCCTTCTCCTTCCCCATC AGCTCGCCTTTCAAATAGGTGAGACCGCCCAAATTCACTCGGGAGGATTG CTGCGTGCCACTCCACACGCTGTGAAGGGGAGCACGACAAGGACGAAGAA AGGGCTTAGTCGAGAGACCTTTGCAGTGTTTATGGAGCCAGAAATGCACG AGCCCATGACCATGCCCGAAGGTCGGACAGTGGATGACGTATGTAAGAAG CAAGGGAGGGTAGGCGTAAGTGTGCCGTCGTTGGCCAGCCGGTGGGATCC GAGTATCGACTTTGCTGAATTTACATCGAGGACGCTAAAGAGCTATTATT GACAAGGAAACTGTCGGAATCTTGATGGAAAAAGAATGCACAATGAAATA AGGAAGA back to topprotein sequence of jgi.p|Nanoce1779_2|543357 >mRNA_5957-protein ID=mRNA_5957-protein|Name=jgi.p|Nanoce1779_2|543357|organism=Nannochloropsis oceanica|type=polypeptide|length=386bp MAKTTTTTPRKLVELQYENLVANKDLSAEIEEAFGDYGLGILTVSGVPGL EEKRRALLPLAHRFASLPPALTKKYEHPQSFYSFGWSHGKETLQHGRPDW LKGSFYANPLHDNPSTDQDLIDRYPAFLHPNIWPSKDVPALESAFKDLGK LIVDVGAMVAKQCDVYVGSKCAGYANNGKVEKEGGKEGMGKLERVVRESR VCKGRLLHYFPYVAKEQEEEKGKEGKGTEMYFSTWCGWHNDHGSLTGLTS AMYLDVEGREVDEDDGGLYALSRGGEVVKILLLPHQLAFQIGETAQIHSG GLLRATPHAVKGSTTRTKKGLSRETFAVFMEPEMHEPMTMPEGRTVDDVC KKQGRVGVSVPSLASRWDPSIDFAEFTSRTLKSYY* back to topmRNA from alignment at scaffold_14:170223..172023+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5957 ID=mRNA_5957|Name=jgi.p|Nanoce1779_2|543357|organism=Nannochloropsis oceanica|type=mRNA|length=1801bp|location=Sequence derived from alignment at scaffold_14:170223..172023+ (Nannochloropsis oceanica) AGACAGGGCAGGGTAGTCGCCAGAATCACCCGGGCGAGCCACGAAAGCGA
AAAAGGAGCTTAGCTGCCTTCTGACTTCGAAGCACCACAGGGTGATGGCC
AAGACAACGACCACCACGCCACGGTGAGTAAGCTCACGCTCGGAGCATGC
CAGGAAAAAACGTCCTGAGTGACCGCTGCATGAACCTTATCCTCTTTCAG
GAAGCTTGTGGAATTGCAGTACGAAAACTTGGTGGCCAACAAAGACTTGT
CGGCGGAGATAGAGGAGGTAAGTGCTTGAAACGGGGGGGATGCAAGAAGG
CAAGGAATAAGGAATCGAGCATCAGAGACAGTCTGGCTAGAACTGGGGCT
GTCGTGCGCGGTCAGGTTTGAGAATCGACTGAAGCAGCTTAGAAAACAGT
GCATCTGACTGTGCCGCATGTTGAGACAACCCTTCTTCGAGCCCGACCCT
TCTTTCTCTCGTTCCTTTCTCCCTCCTCTCACACTCCCTCCATTTGCCGC
ACACACCCCTACACCCGCCAACTGACAGGCATTTGGTGATTATGGTCTAG
GCATCTTGACCGTCTCCGGTGTCCCGGGCCTCGAAGAAAAGCGCCGGGCC
CTCCTTCCCCTCGCCCACCGCTTCGCCTCCCTCCCTCCCGCCCTCACCAA
AAAGTACGAACACCCGCAGAGTTTCTATTCCTTCGGATGGAGCCATGGGA
AAGAAACTCTGCAACACGGTCGGCCCGATTGGTTGAAAGGTTCATTTTAT
GCAAATCCTTTGCACGATAACCCCTCGACAGATCAAGATTTAATTGACAG
ATACCCGGCCTTTTTACACCCGAACATATGGCCTTCCAAGGACGTACCAG
CGTTGGAATCAGCATTCAAAGACTTGGGGAAGTTGATTGTAGACGTCGGG
GCGATGGTTGCCAAGCAGTGTGATGTGTATGTGGGGAGCAAGTGCGCAGG
ATATGCTAATAATGGCAAAGTAGAGAAAGAGGGAGGGAAGGAGGGCATGG
GGAAGTTGGAAAGGGTTGTGAGGGAGTCCAGGGTGTGTAAGGGGAGACTG
CTGCATTATTTTCCGTATGTTGCAAAGGAGCAGGAGGAGGAAAAGGGGAA
GGAAGGGAAGGGAACCGTGTGCCCCAAAAAAGAGGCGGACGAGAAGGACG
AGGAGGGAGGGAAGAAGGAAATGTATTTTAGCACCTGGTGTGGCTGGCAC
AACGATCATGGATCTCTCACGGGATTGACTTCAGCCATGTACTTGGATGT
GGAAGGGCGGGAGGTTGATGTATGCAGCAGCACGAGCAGCAGCGCTAGCA
GCAACAGCGAGGATGATGAAGAAGAGGAAGACGATGGCGGCCTCTACGCC
CTAAGCCGAGGCGGGGAGGTAGTCAAAATCCTTCTCCTTCCCCATCAGCT
CGCCTTTCAAATAGGTGAGACCGCCCAAATTCACTCGGGAGGATTGCTGC
GTGCCACTCCACACGCTGTGAAGGGGAGCACGACAAGGACGAAGAAAGGG
CTTAGTCGAGAGACCTTTGCAGTGTTTATGGAGCCAGAAATGCACGAGCC
CATGACCATGCCCGAAGGTCGGACAGTGGATGACGTATGTAAGAAGCAAG
GTATCATGGAGTCCGATGGCGGGAAAGAGTGTGAGGGCCGAGAAGGAGGG
AGGGTAGGCGTAAGTGTGCCGTCGTTGGCCAGCCGGTGGGATCCGAGTAT
CGACTTTGCTGAATTTACATCGAGGACGCTAAAGAGCTATTATTGACAAG
GAAACTGTCGGAATCTTGATGGAAAAAGAATGCACAATGAAATAAGGAAG
A back to topCoding sequence (CDS) from alignment at scaffold_14:170223..172023+ >mRNA_5957 ID=mRNA_5957|Name=jgi.p|Nanoce1779_2|543357|organism=Nannochloropsis oceanica|type=CDS|length=6948bp|location=Sequence derived from alignment at scaffold_14:170223..172023+ (Nannochloropsis oceanica) ATGGCCAAGACAACGACCACCACGCCACGGAAGCTTGTGGAATTGCAGTA CGAAAACTTGGTGGCCAACAAAGACTTGTCGGCGGAGATAGAGGAGGCAT TTGGTGATTATGGTCTAGGCATCTTGACCGTCTCCGGTGTCCCGGGCCTC GAAGAAAAGCGCCGGGCCCTCCTTCCCCTCGCCCACCGCTTCGCCTCCCT CCCTCCCGCCCTCACCAAAAAGTACGAACACCCGCAGAGTTTCTATTCCT TCGGATGGAGCCATGGGAAAGAAACTCTGCAACACGGTCGGCCCGATTGG TTGAAAGGTTCATTTTATGCAAATCCTTTGCACGATAACCCCTCGACAGA TCAAGATTTAATTGACAGATACCCGGCCTTTTTACACCCGAACATATGGC CTTCCAAGGACGTACCAGCGTTGGAATCAGCATTCAAAGACTTGGGGAAG TTGATTGTAGACGTCGGGGCGATGGTTGCCAAGCAGTGTGATGTGTATGT GGGGAGCAAGTGCGCAGGATATGCTAATAATGGCAAAGTAGAGAAAGAGG GAGGGAAGGAGGGCATGGGGAAGTTGGAAAGGGTTGTGAGGGAGTCCAGG GTGTGTAAGGGGAGACTGCTGCATTATTTTCCGTATGTTGCAAAGGAGCA GGAGGAGGAAAAGGGGAAGGAAGGGAAGGGAACCGAAATGTATTTTAGCA CCTGGTGTGGCTGGCACAACGATCATGGATCTCTCACGGGATTGACTTCA GCCATGTACTTGGATGTGGAAGGGCGGGAGGTTGATGAAGACGATGGCGG CCTCTACGCCCTAAGCCGAGGCGGGGAGGTAGTCAAAATCCTTCTCCTTC CCCATCAGCTCGCCTTTCAAATAGGTGAGACCGCCCAAATTCACTCGGGA GGATTGCTGCGTGCCACTCCACACGCTGTGAAGGGGAGCACGACAAGGAC GAAGAAAGGGCTTAGTCGAGAGACCTTTGCAGTGTTTATGGAGCCAGAAA TGCACGAGCCCATGACCATGCCCGAAGGTCGGACAGTGGATGACGTATGT AAGAAGCAAGGGAGGGTAGGCGTAAGTGTGCCGTCGTTGGCCAGCCGGTG GGATCCGAGTATCGACTTTGCTGAATTTACATCGAGGACGCTAAAGAGCT ATTATTGAATGGCCAAGACAACGACCACCACGCCACGGAAGCTTGTGGAA TTGCAGTACGAAAACTTGGTGGCCAACAAAGACTTGTCGGCGGAGATAGA GGAGGCATTTGGTGATTATGGTCTAGGCATCTTGACCGTCTCCGGTGTCC CGGGCCTCGAAGAAAAGCGCCGGGCCCTCCTTCCCCTCGCCCACCGCTTC GCCTCCCTCCCTCCCGCCCTCACCAAAAAGTACGAACACCCGCAGAGTTT CTATTCCTTCGGATGGAGCCATGGGAAAGAAACTCTGCAACACGGTCGGC CCGATTGGTTGAAAGGTTCATTTTATGCAAATCCTTTGCACGATAACCCC TCGACAGATCAAGATTTAATTGACAGATACCCGGCCTTTTTACACCCGAA CATATGGCCTTCCAAGGACGTACCAGCGTTGGAATCAGCATTCAAAGACT TGGGGAAGTTGATTGTAGACGTCGGGGCGATGGTTGCCAAGCAGTGTGAT GTGTATGTGGGGAGCAAGTGCGCAGGATATGCTAATAATGGCAAAGTAGA GAAAGAGGGAGGGAAGGAGGGCATGGGGAAGTTGGAAAGGGTTGTGAGGG AGTCCAGGGTGTGTAAGGGGAGACTGCTGCATTATTTTCCGTATGTTGCA AAGGAGCAGGAGGAGGAAAAGGGGAAGGAAGGGAAGGGAACCGAAATGTA TTTTAGCACCTGGTGTGGCTGGCACAACGATCATGGATCTCTCACGGGAT TGACTTCAGCCATGTACTTGGATGTGGAAGGGCGGGAGGTTGATGAAGAC GATGGCGGCCTCTACGCCCTAAGCCGAGGCGGGGAGGTAGTCAAAATCCT TCTCCTTCCCCATCAGCTCGCCTTTCAAATAGGTGAGACCGCCCAAATTC ACTCGGGAGGATTGCTGCGTGCCACTCCACACGCTGTGAAGGGGAGCACG ACAAGGACGAAGAAAGGGCTTAGTCGAGAGACCTTTGCAGTGTTTATGGA GCCAGAAATGCACGAGCCCATGACCATGCCCGAAGGTCGGACAGTGGATG ACGTATGTAAGAAGCAAGGGAGGGTAGGCGTAAGTGTGCCGTCGTTGGCC AGCCGGTGGGATCCGAGTATCGACTTTGCTGAATTTACATCGAGGACGCT AAAGAGCTATTATTGAATGGCCAAGACAACGACCACCACGCCACGGAAGC TTGTGGAATTGCAGTACGAAAACTTGGTGGCCAACAAAGACTTGTCGGCG GAGATAGAGGAGGCATTTGGTGATTATGGTCTAGGCATCTTGACCGTCTC CGGTGTCCCGGGCCTCGAAGAAAAGCGCCGGGCCCTCCTTCCCCTCGCCC ACCGCTTCGCCTCCCTCCCTCCCGCCCTCACCAAAAAGTACGAACACCCG CAGAGTTTCTATTCCTTCGGATGGAGCCATGGGAAAGAAACTCTGCAACA CGGTCGGCCCGATTGGTTGAAAGGTTCATTTTATGCAAATCCTTTGCACG ATAACCCCTCGACAGATCAAGATTTAATTGACAGATACCCGGCCTTTTTA CACCCGAACATATGGCCTTCCAAGGACGTACCAGCGTTGGAATCAGCATT CAAAGACTTGGGGAAGTTGATTGTAGACGTCGGGGCGATGGTTGCCAAGC AGTGTGATGTGTATGTGGGGAGCAAGTGCGCAGGATATGCTAATAATGGC AAAGTAGAGAAAGAGGGAGGGAAGGAGGGCATGGGGAAGTTGGAAAGGGT TGTGAGGGAGTCCAGGGTGTGTAAGGGGAGACTGCTGCATTATTTTCCGT ATGTTGCAAAGGAGCAGGAGGAGGAAAAGGGGAAGGAAGGGAAGGGAACC GAAATGTATTTTAGCACCTGGTGTGGCTGGCACAACGATCATGGATCTCT CACGGGATTGACTTCAGCCATGTACTTGGATGTGGAAGGGCGGGAGGTTG ATGAAGACGATGGCGGCCTCTACGCCCTAAGCCGAGGCGGGGAGGTAGTC AAAATCCTTCTCCTTCCCCATCAGCTCGCCTTTCAAATAGGTGAGACCGC CCAAATTCACTCGGGAGGATTGCTGCGTGCCACTCCACACGCTGTGAAGG GGAGCACGACAAGGACGAAGAAAGGGCTTAGTCGAGAGACCTTTGCAGTG TTTATGGAGCCAGAAATGCACGAGCCCATGACCATGCCCGAAGGTCGGAC AGTGGATGACGTATGTAAGAAGCAAGGGAGGGTAGGCGTAAGTGTGCCGT CGTTGGCCAGCCGGTGGGATCCGAGTATCGACTTTGCTGAATTTACATCG AGGACGCTAAAGAGCTATTATTGAATGGCCAAGACAACGACCACCACGCC ACGGAAGCTTGTGGAATTGCAGTACGAAAACTTGGTGGCCAACAAAGACT TGTCGGCGGAGATAGAGGAGGCATTTGGTGATTATGGTCTAGGCATCTTG ACCGTCTCCGGTGTCCCGGGCCTCGAAGAAAAGCGCCGGGCCCTCCTTCC CCTCGCCCACCGCTTCGCCTCCCTCCCTCCCGCCCTCACCAAAAAGTACG AACACCCGCAGAGTTTCTATTCCTTCGGATGGAGCCATGGGAAAGAAACT CTGCAACACGGTCGGCCCGATTGGTTGAAAGGTTCATTTTATGCAAATCC TTTGCACGATAACCCCTCGACAGATCAAGATTTAATTGACAGATACCCGG CCTTTTTACACCCGAACATATGGCCTTCCAAGGACGTACCAGCGTTGGAA TCAGCATTCAAAGACTTGGGGAAGTTGATTGTAGACGTCGGGGCGATGGT TGCCAAGCAGTGTGATGTGTATGTGGGGAGCAAGTGCGCAGGATATGCTA ATAATGGCAAAGTAGAGAAAGAGGGAGGGAAGGAGGGCATGGGGAAGTTG GAAAGGGTTGTGAGGGAGTCCAGGGTGTGTAAGGGGAGACTGCTGCATTA TTTTCCGTATGTTGCAAAGGAGCAGGAGGAGGAAAAGGGGAAGGAAGGGA AGGGAACCGAAATGTATTTTAGCACCTGGTGTGGCTGGCACAACGATCAT GGATCTCTCACGGGATTGACTTCAGCCATGTACTTGGATGTGGAAGGGCG GGAGGTTGATGAAGACGATGGCGGCCTCTACGCCCTAAGCCGAGGCGGGG AGGTAGTCAAAATCCTTCTCCTTCCCCATCAGCTCGCCTTTCAAATAGGT GAGACCGCCCAAATTCACTCGGGAGGATTGCTGCGTGCCACTCCACACGC TGTGAAGGGGAGCACGACAAGGACGAAGAAAGGGCTTAGTCGAGAGACCT TTGCAGTGTTTATGGAGCCAGAAATGCACGAGCCCATGACCATGCCCGAA GGTCGGACAGTGGATGACGTATGTAAGAAGCAAGGGAGGGTAGGCGTAAG TGTGCCGTCGTTGGCCAGCCGGTGGGATCCGAGTATCGACTTTGCTGAAT TTACATCGAGGACGCTAAAGAGCTATTATTGAATGGCCAAGACAACGACC ACCACGCCACGGAAGCTTGTGGAATTGCAGTACGAAAACTTGGTGGCCAA CAAAGACTTGTCGGCGGAGATAGAGGAGGCATTTGGTGATTATGGTCTAG GCATCTTGACCGTCTCCGGTGTCCCGGGCCTCGAAGAAAAGCGCCGGGCC CTCCTTCCCCTCGCCCACCGCTTCGCCTCCCTCCCTCCCGCCCTCACCAA AAAGTACGAACACCCGCAGAGTTTCTATTCCTTCGGATGGAGCCATGGGA AAGAAACTCTGCAACACGGTCGGCCCGATTGGTTGAAAGGTTCATTTTAT GCAAATCCTTTGCACGATAACCCCTCGACAGATCAAGATTTAATTGACAG ATACCCGGCCTTTTTACACCCGAACATATGGCCTTCCAAGGACGTACCAG CGTTGGAATCAGCATTCAAAGACTTGGGGAAGTTGATTGTAGACGTCGGG GCGATGGTTGCCAAGCAGTGTGATGTGTATGTGGGGAGCAAGTGCGCAGG ATATGCTAATAATGGCAAAGTAGAGAAAGAGGGAGGGAAGGAGGGCATGG GGAAGTTGGAAAGGGTTGTGAGGGAGTCCAGGGTGTGTAAGGGGAGACTG CTGCATTATTTTCCGTATGTTGCAAAGGAGCAGGAGGAGGAAAAGGGGAA GGAAGGGAAGGGAACCGAAATGTATTTTAGCACCTGGTGTGGCTGGCACA ACGATCATGGATCTCTCACGGGATTGACTTCAGCCATGTACTTGGATGTG GAAGGGCGGGAGGTTGATGAAGACGATGGCGGCCTCTACGCCCTAAGCCG AGGCGGGGAGGTAGTCAAAATCCTTCTCCTTCCCCATCAGCTCGCCTTTC AAATAGGTGAGACCGCCCAAATTCACTCGGGAGGATTGCTGCGTGCCACT CCACACGCTGTGAAGGGGAGCACGACAAGGACGAAGAAAGGGCTTAGTCG AGAGACCTTTGCAGTGTTTATGGAGCCAGAAATGCACGAGCCCATGACCA TGCCCGAAGGTCGGACAGTGGATGACGTATGTAAGAAGCAAGGGAGGGTA GGCGTAAGTGTGCCGTCGTTGGCCAGCCGGTGGGATCCGAGTATCGACTT TGCTGAATTTACATCGAGGACGCTAAAGAGCTATTATTGAATGGCCAAGA CAACGACCACCACGCCACGGAAGCTTGTGGAATTGCAGTACGAAAACTTG GTGGCCAACAAAGACTTGTCGGCGGAGATAGAGGAGGCATTTGGTGATTA TGGTCTAGGCATCTTGACCGTCTCCGGTGTCCCGGGCCTCGAAGAAAAGC GCCGGGCCCTCCTTCCCCTCGCCCACCGCTTCGCCTCCCTCCCTCCCGCC CTCACCAAAAAGTACGAACACCCGCAGAGTTTCTATTCCTTCGGATGGAG CCATGGGAAAGAAACTCTGCAACACGGTCGGCCCGATTGGTTGAAAGGTT CATTTTATGCAAATCCTTTGCACGATAACCCCTCGACAGATCAAGATTTA ATTGACAGATACCCGGCCTTTTTACACCCGAACATATGGCCTTCCAAGGA CGTACCAGCGTTGGAATCAGCATTCAAAGACTTGGGGAAGTTGATTGTAG ACGTCGGGGCGATGGTTGCCAAGCAGTGTGATGTGTATGTGGGGAGCAAG TGCGCAGGATATGCTAATAATGGCAAAGTAGAGAAAGAGGGAGGGAAGGA GGGCATGGGGAAGTTGGAAAGGGTTGTGAGGGAGTCCAGGGTGTGTAAGG GGAGACTGCTGCATTATTTTCCGTATGTTGCAAAGGAGCAGGAGGAGGAA AAGGGGAAGGAAGGGAAGGGAACCGAAATGTATTTTAGCACCTGGTGTGG CTGGCACAACGATCATGGATCTCTCACGGGATTGACTTCAGCCATGTACT TGGATGTGGAAGGGCGGGAGGTTGATGAAGACGATGGCGGCCTCTACGCC CTAAGCCGAGGCGGGGAGGTAGTCAAAATCCTTCTCCTTCCCCATCAGCT CGCCTTTCAAATAGGTGAGACCGCCCAAATTCACTCGGGAGGATTGCTGC GTGCCACTCCACACGCTGTGAAGGGGAGCACGACAAGGACGAAGAAAGGG CTTAGTCGAGAGACCTTTGCAGTGTTTATGGAGCCAGAAATGCACGAGCC CATGACCATGCCCGAAGGTCGGACAGTGGATGACGTATGTAAGAAGCAAG GGAGGGTAGGCGTAAGTGTGCCGTCGTTGGCCAGCCGGTGGGATCCGAGT ATCGACTTTGCTGAATTTACATCGAGGACGCTAAAGAGCTATTATTGA back to top
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