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Properties
Property Name | Value |
TranscriptId | 593311 |
Track | FilteredModels2 |
ProteinId | 593225 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_14 | supercontig | scaffold_14:141089..143635 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5947 ID=mRNA_5947|Name=jgi.p|Nanoce1779_2|593225|organism=Nannochloropsis oceanica|type=mRNA|length=2208bp TGGGCTTTTGCGCCGGTGTGCTGGAGGAAGTGCGTCGACTGGCCATAGCG TCGTCGTCTTTGCAGAAGCACTGGAAATTTTGAGTAAAGGAGTGAGTGTG AGGGATGTAGGGCGTTCCGTTTGTTGGGGATGGGGCATGGAAGAAAGGCA GAGCGCCAGCCGGACCGGTCAAGCGCGTAATTTGATGATGACTCAACGTC CCGCACGAGGCCACCATGCTGCACAACAGGACTATGGGGACCTGCTGCGA TGGTGTTTACACAATGCCGCAGAAATGGACCGTACATGCTTGCTTCAGGC TTGCCTGCCTCCTTTTGGCGATGCTCACTCACCCCATGGTGATTGTCGGT TCTCGTGAAGTAATGGTTCGCCAGTCTTGGACAAGTTGCTGTTGCTGTTA TCACTGGCCCACACGTACTCAACGCTCTTTCATGCATACTCGATAGCTAT GAAGCATCGCGAGACTTCCTGCGTCATGCTCTTGACCACGTCCATTTCAA TGCTGCTCATGGTCCGTCGGACTTTTGCCTTTGCGCCCTTGATCCAACAA TCCTCACGGGCTTGGACGGCGTCTACGACTGGCCTTTCCGGGAGTAAAGC GGCCACAGCCACCGCCCACAGCAGCAGCCGCGTTGGTTATGGTGGTGGAG GAGGTGGAGGAGGCAGCGATTATCGTGGTGGCGGTGGTGGGGGACAGCGC ACGTCTTCCCGTCCGCCTCCCCGTGAGACTGAGGTCGAGCCCTCCGACAG GATCCAGAGGGATTATCCGCATGTCGTGCTACGGGCAGGAAAGGCTCGCT TGTTTTTGGAGGGCAATCCGTTGGTATACGGAGAAGCCGTCCATGATGTG GTAGGAGACGTGGCGGATGGTGATTTTGTGGAGGTGGTGGACCATAGAGG CAATTTGATTGGCAAGGGGTGCTACAATTCCCAGAGCATGTACCGTGTCC GTCTCCTGTGGCATGCCCGCGAGCGAGGGGAGGCATCATATGCGGCTTCT TTGGAGGATATGGTCACACGGCGGGTGAGCACGGCATGGGCAACGAGGCA GGCGTTGGGGCTGCCGAACAAGGAGACGACGTGCTTTCGGTTGGTGAATG GGGAGGGAGATCGATTGAGTGGGCTGGCCGCCGATGTCTTTGACAAGGTC TGTGTCGTGTCCAGCAGTTCATTGTGGTGCGAGAAGCATAAAAAGGCGAT TATCGCGGGATTGGACACTGTGCTGGGCCCGTCGGGGATCAAGACGGTTT GGCGTCGGAGCGAGGCGAGATTGTCGCAGGATGGGTTCGAGGACAAGGAG GAGGGCGTGAAGCCCTTCGTTGACGTCAAGGCGGAAGCACAAAAGGAGGG GGCCTCTGTGTGGGTGAAGGAGGCGGGTATCAAATACAAGGTCTACCCAG AGCTGGGGCAAAAGACGGGATTTTACTGTGATCAGCGTCAGAACCGGCAG ATGATCCAGAGTCTGTCCAAGGGAAAGCGGGTGCTGGATCTCTTTTGTTA TACGGGTGGCTTTGCATTGAATGCGGCCAAAGGCGGGGCCAAGGAAGTTG TCGGTGTCGACAGCTCCGCACTCGCCGTGGAGACTGCGATTGAGAACGCG GCGGCCAATGGATTAGAAGGCAAGACCTCTTTTATCAAATCAGACGTGCT GGTCTATGCCCGCGGGCTAGGCGAAGGAGGCGAGCGTTCGTTTGACATTA TAATTGCGGATCCCCCCAAGCTGGCACCGACTCGACGGGACTTGCCAAGG GCATTGCACAAATACCTGAAGATCAATCGGGCGGCGTTCCGGATGGTGAA GAGTGGGGGGTTAGTGCTGACGCACACCTGCTCGGCGGCCTTAACGCAGG AACCGGAAGAGTTCAGGAAGATGGTCAATCAGGCGGCCAATGATGTTGGC CGCTCTATCACCATCCTCCAAACCAGCCATGCCGCCCCTTGCCACGTGCA ATCGGCTGTGTACGGAGAGTCCAACTATCTGACAGCCATGCTTGTTGCCG TATTCTGAACCGAGAAAAAGTCAAAGCTTAAAGAAAAACGGACACAAAGA AAGCAAATGTATTATTCAAGGCGCCGGCGTTTATGATCTTGATAAAGGAA GCACCAAGATCAAATAAGAAAGAATCTATGTTGCTTATGCTGATTGAACA AGTCTCGCTCGCTGAGGTAAATTATTTATTTTGGACCGGCTCTCGTTCTT CGCTGTCG back to topprotein sequence of jgi.p|Nanoce1779_2|593225 >mRNA_5947-protein ID=mRNA_5947-protein|Name=jgi.p|Nanoce1779_2|593225|organism=Nannochloropsis oceanica|type=polypeptide|length=520bp MKHRETSCVMLLTTSISMLLMVRRTFAFAPLIQQSSRAWTASTTGLSGSK AATATAHSSSRVGYGGGGGGGGSDYRGGGGGGQRTSSRPPPRETEVEPSD RIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHDVVGDVADGDFVEVVDHR GNLIGKGCYNSQSMYRVRLLWHARERGEASYAASLEDMVTRRVSTAWATR QALGLPNKETTCFRLVNGEGDRLSGLAADVFDKVCVVSSSSLWCEKHKKA IIAGLDTVLGPSGIKTVWRRSEARLSQDGFEDKEEGVKPFVDVKAEAQKE GASVWVKEAGIKYKVYPELGQKTGFYCDQRQNRQMIQSLSKGKRVLDLFC YTGGFALNAAKGGAKEVVGVDSSALAVETAIENAAANGLEGKTSFIKSDV LVYARGLGEGGERSFDIIIADPPKLAPTRRDLPRALHKYLKINRAAFRMV KSGGLVLTHTCSAALTQEPEEFRKMVNQAANDVGRSITILQTSHAAPCHV QSAVYGESNYLTAMLVAVF* back to topmRNA from alignment at scaffold_14:141089..143635+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5947 ID=mRNA_5947|Name=jgi.p|Nanoce1779_2|593225|organism=Nannochloropsis oceanica|type=mRNA|length=2547bp|location=Sequence derived from alignment at scaffold_14:141089..143635+ (Nannochloropsis oceanica) TGGGCTTTTGCGCCGGTGTGCTGGAGGAAGTGCGTCGACTGGCCATAGCG
TCGTCGTCTTTGCAGAAGCACTGGAAATTTTGAGTAAAGGAGTGAGTGTG
AGGGATGTAGGGCGTTCCGTTTGTTGGGGATGGGGCATGGAAGAAAGGCA
GAGCGCCAGCCGGACCGGTCAAGCGCGTAATTTGATGATGACTCAACGTC
CCGCACGAGGCCACCATGCTGCACAACAGGACTATGGGGACCTGCTGCGA
TGGTGTTTACACAATGCCGCAGAAATGGACCGTACATGCTTGCTTCAGGC
TTGCCTGCCTCCTTTTGGCGATGCTCACTCACCCCATGGTGATTGTCGGT
TCTCGTGAAGTAATGGTTCGCCAGTCTTGGACAAGTTGCTGTTGCTGTTA
TCACTGGCCCACACGTACTCAACGCTCTTTCATGCATACTCGATAGCTAT
GAAGCATCGCGAGACTTCCTGCGTCATGCTCTTGACCACGTCCATTTCAA
TGCTGCTCATGGTCCGTCGGACTTTTGCCTTTGCGCCCTTGATCCAACAA
TCCTCACGGGCTTGGACGGCGTCTACGACTGGCCTTTCCGGGAGTAAAGC
GGCCACAGCCACCGCCCACAGCAGCAGCCGCGTTGGTTATGGTGGTGGAG
GAGGTGGAGGAGGCAGCGATTATCGTGGTGGCGGTGGTGGGGGACAGCGC
ACGTCTTCCCGTCCGCCTCCCCGTGAGACTGAGGTCGAGCCCTCCGACAG
GATCCAGAGGGATTATCCGCATGTCGTGCTACGGGCAGGAAAGGCTCGCT
TGTTTTTGGAGGGCAATCCGTTGGTATACGGAGAAGCCGTCCATGATGTG
GTAGGAGACGTGGCGGATGGTGATTTTGTGGAGGTGGTGGACCATAGAGG
CAATTTGATTGGCAAGGGGTGCTACAATTCCCAGAGCATGTACCGTGTCC
GTCTCCTGTGGCATGCCCGCGAGCGAGGGGAGGCATCATATGCGGCTTCT
TTGGAGGATATGGTCACACGGCGGGTGAGCACGGCATGGGCAACGAGGCA
GGCGTTGGGGCTGCCGAACAAGGAGACGACGTGCTTTCGGTTGGTGAATG
GGGAGGGAGATCGATTGAGTGGGCTGGCCGCCGATGTCTTTGACAAGGTC
TGTGTCGTGTCCAGCAGTTCATTGTGGTGCGAGAAGCATAAAAAGGCGAT
TATCGCGGGATTGGACACTGTGCTGGGCCCGTCGGGGATCAAGACGGTTT
GGCGTCGGAGCGAGGCGAGATTGTCGCAGGATGGGTTCGAGGACAAGGAG
GAGGGCGTGAAGCCCTTCGTTGACGTCAAGGCGGAAGCACAAAAGGAGGG
GGCCTCTGTGTGGGTGAAGGAGGCGGGTATCAAATACAAGGTCTACCCAG
AGCTGGGGCAAAAGACGGGATTTTACTGTGATCAGCGTCAGAACCGGCAG
ATGATCCAGAGTCTGTCCAAGGGAAAGCGGGTGCTGGATCTCTTTTGTTA
TACGGGTGGCTTTGCATTGAATGGTAAGACGGAAGAGAAGAGAGGGAGGA
AGGTTGAGTGTGTGAAGAACGCCATCAATTTTTGCTTTTTGTCTGTTTTC
ATGTTGATACCTAGAATTGCTGCAGGGGGTTAGTGGACTTTCACGAGACC
GCATCAGCATTCTTCCCTTTTAGGTTTTCGTACCCCTGTCCCCTTTTTCC
TCATTATCCCCCCACAACTCTACTCTGTTACAGCGGCCAAAGGCGGGGCC
AAGGAAGTTGTCGGTGTCGACAGCTCCGCACTCGCCGTGGAGACTGCGAT
TGAGAACGCGGCGGCCAATGGATTAGAAGGCAAGACCTCTTTTATCAAAT
CAGACGTGCTGGTCTATGCCCGCGGGCTAGGCGAAGGAGGCGAGCGTTCG
TTTGACATTATAATTGCGGATCCCCCCAAGCTGGCACCGACTCGACGGGA
CTTGCCAAGGGCATTGCACAAATACCTGAAGATCAATCGGGCGGCGTTCC
GGATGGTGAAGAGTGGGGGGTTAGTGCTGACGCACACCTGCTCGGCGGCC
TTAACGCAGGAACCGGAAGAGTTCAGGAAGATGGTCAATCAGGCGGTAAG
TTTGGGTCGTAAGAACATAGGAGAGGAGAAATTATATTTAGAATGGGCGG
AATTGAAAATTAGATTTCATCACATTAGCTTACCTATCTATTGCTTCCCT
TCGTCAACTAATTTGTCCACACAGGCCAATGATGTTGGCCGCTCTATCAC
CATCCTCCAAACCAGCCATGCCGCCCCTTGCCACGTGCAATCGGCTGTGT
ACGGAGAGTCCAACTATCTGACAGCCATGCTTGTTGCCGTATTCTGAACC
GAGAAAAAGTCAAAGCTTAAAGAAAAACGGACACAAAGAAAGCAAATGTA
TTATTCAAGGCGCCGGCGTTTATGATCTTGATAAAGGAAGCACCAAGATC
AAATAAGAAAGAATCTATGTTGCTTATGCTGATTGAACAAGTCTCGCTCG
CTGAGGTAAATTATTTATTTTGGACCGGCTCTCGTTCTTCGCTGTCG back to topCoding sequence (CDS) from alignment at scaffold_14:141089..143635+ >mRNA_5947 ID=mRNA_5947|Name=jgi.p|Nanoce1779_2|593225|organism=Nannochloropsis oceanica|type=CDS|length=4680bp|location=Sequence derived from alignment at scaffold_14:141089..143635+ (Nannochloropsis oceanica) ATGAAGCATCGCGAGACTTCCTGCGTCATGCTCTTGACCACGTCCATTTC AATGCTGCTCATGGTCCGTCGGACTTTTGCCTTTGCGCCCTTGATCCAAC AATCCTCACGGGCTTGGACGGCGTCTACGACTGGCCTTTCCGGGAGTAAA GCGGCCACAGCCACCGCCCACAGCAGCAGCCGCGTTGGTTATGGTGGTGG AGGAGGTGGAGGAGGCAGCGATTATCGTGGTGGCGGTGGTGGGGGACAGC GCACGTCTTCCCGTCCGCCTCCCCGTGAGACTGAGGTCGAGCCCTCCGAC AGGATCCAGAGGGATTATCCGCATGTCGTGCTACGGGCAGGAAAGGCTCG CTTGTTTTTGGAGGGCAATCCGTTGGTATACGGAGAAGCCGTCCATGATG TGGTAGGAGACGTGGCGGATGGTGATTTTGTGGAGGTGGTGGACCATAGA GGCAATTTGATTGGCAAGGGGTGCTACAATTCCCAGAGCATGTACCGTGT CCGTCTCCTGTGGCATGCCCGCGAGCGAGGGGAGGCATCATATGCGGCTT CTTTGGAGGATATGGTCACACGGCGGGTGAGCACGGCATGGGCAACGAGG CAGGCGTTGGGGCTGCCGAACAAGGAGACGACGTGCTTTCGGTTGGTGAA TGGGGAGGGAGATCGATTGAGTGGGCTGGCCGCCGATGTCTTTGACAAGG TCTGTGTCGTGTCCAGCAGTTCATTGTGGTGCGAGAAGCATAAAAAGGCG ATTATCGCGGGATTGGACACTGTGCTGGGCCCGTCGGGGATCAAGACGGT TTGGCGTCGGAGCGAGGCGAGATTGTCGCAGGATGGGTTCGAGGACAAGG AGGAGGGCGTGAAGCCCTTCGTTGACGTCAAGGCGGAAGCACAAAAGGAG GGGGCCTCTGTGTGGGTGAAGGAGGCGGGTATCAAATACAAGGTCTACCC AGAGCTGGGGCAAAAGACGGGATTTTACTGTGATCAGCGTCAGAACCGGC AGATGATCCAGAGTCTGTCCAAGGGAAAGCGGGTGCTGGATCTCTTTTGT TATACGGGTGGCTTTGCATTGAATGCGGCCAAAGGCGGGGCCAAGGAAGT TGTCGGTGTCGACAGCTCCGCACTCGCCGTGGAGACTGCGATTGAGAACG CGGCGGCCAATGGATTAGAAGGCAAGACCTCTTTTATCAAATCAGACGTG CTGGTCTATGCCCGCGGGCTAGGCGAAGGAGGCGAGCGTTCGTTTGACAT TATAATTGCGGATCCCCCCAAGCTGGCACCGACTCGACGGGACTTGCCAA GGGCATTGCACAAATACCTGAAGATCAATCGGGCGGCGTTCCGGATGGTG AAGAGTGGGGGGTTAGTGCTGACGCACACCTGCTCGGCGGCCTTAACGCA GGAACCGGAAGAGTTCAGGAAGATGGTCAATCAGGCGGCCAATGATGTTG GCCGCTCTATCACCATCCTCCAAACCAGCCATGCCGCCCCTTGCCACGTG CAATCGGCTGTGTACGGAGAGTCCAACTATCTGACAGCCATGCTTGTTGC CGTATTCTGAATGAAGCATCGCGAGACTTCCTGCGTCATGCTCTTGACCA CGTCCATTTCAATGCTGCTCATGGTCCGTCGGACTTTTGCCTTTGCGCCC TTGATCCAACAATCCTCACGGGCTTGGACGGCGTCTACGACTGGCCTTTC CGGGAGTAAAGCGGCCACAGCCACCGCCCACAGCAGCAGCCGCGTTGGTT ATGGTGGTGGAGGAGGTGGAGGAGGCAGCGATTATCGTGGTGGCGGTGGT GGGGGACAGCGCACGTCTTCCCGTCCGCCTCCCCGTGAGACTGAGGTCGA GCCCTCCGACAGGATCCAGAGGGATTATCCGCATGTCGTGCTACGGGCAG GAAAGGCTCGCTTGTTTTTGGAGGGCAATCCGTTGGTATACGGAGAAGCC GTCCATGATGTGGTAGGAGACGTGGCGGATGGTGATTTTGTGGAGGTGGT GGACCATAGAGGCAATTTGATTGGCAAGGGGTGCTACAATTCCCAGAGCA TGTACCGTGTCCGTCTCCTGTGGCATGCCCGCGAGCGAGGGGAGGCATCA TATGCGGCTTCTTTGGAGGATATGGTCACACGGCGGGTGAGCACGGCATG GGCAACGAGGCAGGCGTTGGGGCTGCCGAACAAGGAGACGACGTGCTTTC GGTTGGTGAATGGGGAGGGAGATCGATTGAGTGGGCTGGCCGCCGATGTC TTTGACAAGGTCTGTGTCGTGTCCAGCAGTTCATTGTGGTGCGAGAAGCA TAAAAAGGCGATTATCGCGGGATTGGACACTGTGCTGGGCCCGTCGGGGA TCAAGACGGTTTGGCGTCGGAGCGAGGCGAGATTGTCGCAGGATGGGTTC GAGGACAAGGAGGAGGGCGTGAAGCCCTTCGTTGACGTCAAGGCGGAAGC ACAAAAGGAGGGGGCCTCTGTGTGGGTGAAGGAGGCGGGTATCAAATACA AGGTCTACCCAGAGCTGGGGCAAAAGACGGGATTTTACTGTGATCAGCGT CAGAACCGGCAGATGATCCAGAGTCTGTCCAAGGGAAAGCGGGTGCTGGA TCTCTTTTGTTATACGGGTGGCTTTGCATTGAATGCGGCCAAAGGCGGGG CCAAGGAAGTTGTCGGTGTCGACAGCTCCGCACTCGCCGTGGAGACTGCG ATTGAGAACGCGGCGGCCAATGGATTAGAAGGCAAGACCTCTTTTATCAA ATCAGACGTGCTGGTCTATGCCCGCGGGCTAGGCGAAGGAGGCGAGCGTT CGTTTGACATTATAATTGCGGATCCCCCCAAGCTGGCACCGACTCGACGG GACTTGCCAAGGGCATTGCACAAATACCTGAAGATCAATCGGGCGGCGTT CCGGATGGTGAAGAGTGGGGGGTTAGTGCTGACGCACACCTGCTCGGCGG CCTTAACGCAGGAACCGGAAGAGTTCAGGAAGATGGTCAATCAGGCGGCC AATGATGTTGGCCGCTCTATCACCATCCTCCAAACCAGCCATGCCGCCCC TTGCCACGTGCAATCGGCTGTGTACGGAGAGTCCAACTATCTGACAGCCA TGCTTGTTGCCGTATTCTGAATGAAGCATCGCGAGACTTCCTGCGTCATG CTCTTGACCACGTCCATTTCAATGCTGCTCATGGTCCGTCGGACTTTTGC CTTTGCGCCCTTGATCCAACAATCCTCACGGGCTTGGACGGCGTCTACGA CTGGCCTTTCCGGGAGTAAAGCGGCCACAGCCACCGCCCACAGCAGCAGC CGCGTTGGTTATGGTGGTGGAGGAGGTGGAGGAGGCAGCGATTATCGTGG TGGCGGTGGTGGGGGACAGCGCACGTCTTCCCGTCCGCCTCCCCGTGAGA CTGAGGTCGAGCCCTCCGACAGGATCCAGAGGGATTATCCGCATGTCGTG CTACGGGCAGGAAAGGCTCGCTTGTTTTTGGAGGGCAATCCGTTGGTATA CGGAGAAGCCGTCCATGATGTGGTAGGAGACGTGGCGGATGGTGATTTTG TGGAGGTGGTGGACCATAGAGGCAATTTGATTGGCAAGGGGTGCTACAAT TCCCAGAGCATGTACCGTGTCCGTCTCCTGTGGCATGCCCGCGAGCGAGG GGAGGCATCATATGCGGCTTCTTTGGAGGATATGGTCACACGGCGGGTGA GCACGGCATGGGCAACGAGGCAGGCGTTGGGGCTGCCGAACAAGGAGACG ACGTGCTTTCGGTTGGTGAATGGGGAGGGAGATCGATTGAGTGGGCTGGC CGCCGATGTCTTTGACAAGGTCTGTGTCGTGTCCAGCAGTTCATTGTGGT GCGAGAAGCATAAAAAGGCGATTATCGCGGGATTGGACACTGTGCTGGGC CCGTCGGGGATCAAGACGGTTTGGCGTCGGAGCGAGGCGAGATTGTCGCA GGATGGGTTCGAGGACAAGGAGGAGGGCGTGAAGCCCTTCGTTGACGTCA AGGCGGAAGCACAAAAGGAGGGGGCCTCTGTGTGGGTGAAGGAGGCGGGT ATCAAATACAAGGTCTACCCAGAGCTGGGGCAAAAGACGGGATTTTACTG TGATCAGCGTCAGAACCGGCAGATGATCCAGAGTCTGTCCAAGGGAAAGC GGGTGCTGGATCTCTTTTGTTATACGGGTGGCTTTGCATTGAATGCGGCC AAAGGCGGGGCCAAGGAAGTTGTCGGTGTCGACAGCTCCGCACTCGCCGT GGAGACTGCGATTGAGAACGCGGCGGCCAATGGATTAGAAGGCAAGACCT CTTTTATCAAATCAGACGTGCTGGTCTATGCCCGCGGGCTAGGCGAAGGA GGCGAGCGTTCGTTTGACATTATAATTGCGGATCCCCCCAAGCTGGCACC GACTCGACGGGACTTGCCAAGGGCATTGCACAAATACCTGAAGATCAATC GGGCGGCGTTCCGGATGGTGAAGAGTGGGGGGTTAGTGCTGACGCACACC TGCTCGGCGGCCTTAACGCAGGAACCGGAAGAGTTCAGGAAGATGGTCAA TCAGGCGGCCAATGATGTTGGCCGCTCTATCACCATCCTCCAAACCAGCC ATGCCGCCCCTTGCCACGTGCAATCGGCTGTGTACGGAGAGTCCAACTAT CTGACAGCCATGCTTGTTGCCGTATTCTGA back to top
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