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Properties
| Property Name | Value |
|---|
| TranscriptId | 593193 |
| Track | FilteredModels2 |
| ProteinId | 593107 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:42158..44478 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5914 ID=mRNA_5914|Name=jgi.p|Nanoce1779_2|593107|organism=Nannochloropsis oceanica|type=mRNA|length=939bp
AGGAGGACGGGAGGGAGAGGTAGTGACGTTGTCGGAGGCGGATTTTAAGG
CCAAGGTGGTGGAGAGCAAGGACCTGTGGTTGGTGGCCTTCATTGCTCCG
TGGTGTGGTTACTGCAAAAAGCTCGAGCCGGAATGGAAGGAAGCCGCGAG
CCGTCTCAAAGGCCAAGCCCGGCTTGGCCTGGTAGACGCCACGGTCCACA
CAAATCTTGCCGGGCAGTTTGATGTGAAGGGATACCCGAGTATCAAGATG
TTTGCCGCCGGGAAGAAGAAAGGAATGCGCGACTACACCGACTACCAGGG
GCCTCGCGAGTCGGCGGGCATCGTTGACTTCACGCTTAGCTGGTTGGAAG
CACATGGCGCCCCCCCTGAGGTGCATCAACTGCTCGACTCGAGGGAGTAT
GAGGACGCCTGCTCAGGCCCCATTATCTGCTCCCTGGCTGCCCTTCCCCA
TCTCCTTGACACGGGCAAGTCCGGACGTGAGGCCTACCTTACCACCCTCC
TGGAAGTAGCCAAAAAGAATCGCAAAGGACCCTTCCGCCTCTTTTGGACA
GAAGGTGGGGCTCAGCCCGCGGCTGAAGAGGCCTTAGGCCTGACGTTTGG
ATTCCCGGCTGTGGCGGCCTTGAGCAAGGAAAAGGGCGTGTTCGCGACGT
TTAAGGGCTCATTTAACGCCGAGTCTATCACCTCCTTTCTGGTCGGCCTG
ACGACGGGGAAAGAGGTCACGGCGCCGCTACCCGGGGGAAAGCTCGTGGT
AGTACCAGCATCGGCGTGGGATGGGAAGGAGGCAGTGGTGGTGGAGGAGG
AAGAGTTCTCGCTTGAGGATATTATGGGGGAGGAGCTCTAATGTCGACGA
GGGAGAGGAGGAGGAGGAGGAGGAAAAGCTGACGGAGGAAAGAGTCGATC
GAAAGGACGGCGAGAGAATGCATTGTTCAGGGACGCCGG back to topprotein sequence of jgi.p|Nanoce1779_2|593107 >mRNA_5914-protein ID=mRNA_5914-protein|Name=jgi.p|Nanoce1779_2|593107|organism=Nannochloropsis oceanica|type=polypeptide|length=198bp
MFAAGKKKGMRDYTDYQGPRESAGIVDFTLSWLEAHGAPPEVHQLLDSRE
YEDACSGPIICSLAALPHLLDTGKSGREAYLTTLLEVAKKNRKGPFRLFW
TEGGAQPAAEEALGLTFGFPAVAALSKEKGVFATFKGSFNAESITSFLVG
LTTGKEVTAPLPGGKLVVVPASAWDGKEAVVVEEEEFSLEDIMGEEL* back to topmRNA from alignment at scaffold_14:42158..44478- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5914 ID=mRNA_5914|Name=jgi.p|Nanoce1779_2|593107|organism=Nannochloropsis oceanica|type=mRNA|length=2321bp|location=Sequence derived from alignment at scaffold_14:42158..44478- (Nannochloropsis oceanica)
AGGAGGACGGGAGGGAGAGGTAGTGACGTTGTCGGAGGCGGATTTTAAGG
CCAAGGTGGTGGAGAGCAAGGACCTGTGGTTGGTGGCCTTCATTGCTCCG
TGGTGTGGTTACTGGTGAGCAGGGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGGAAGAAGGGAGGGGAAGAAGGGAGGCGCGGCTCC
CCATCCCGCTTGCACTTAATTTGACCACTGTGACAGCAAAAAGCTCGAGC
CGGAATGGAAGGAAGCCGCGAGCCGTCTCAAAGGTACTGTCTTCCTTCCT
CCCTCCCTCCCTCCCTCCTTCCTTCGACTTCCTCCTTCCCTCCCTCCTTC
CCTCCCTCCTTTCTTCGAGTTCTCCTTCCCTCCCTCCCTCCCTCCCTTTT
TCTTTCGACTTCTCCCTCCCTCCCTCCCTCCCTCCGTGCAGGCCAAGCCC
GGCTTGGCCTGGTAGACGCCACGGTCCACACAAATCTTGCCGGGCAGTTT
GATGTGAAGGGATACCCGAGTATCAAGGTAGGGAGGGAGGGAGGGAGCGA
GGGAGCGAGGGAAGGAGGGGGGTTTGGTGAGAGATGCGACGCTCTAATTT
GTCTCTCATCACCTGCAAGAGGAAGGGAGGGAGGGAGGGACGGAGAGAAG
GACGGAGCGAAGGCGTACAGAGGACATATGTTGTGCTTAATCTTCATCTA
TCTACATGTACATTCCTAGGAGATATCTTTTGTTAAAGCATTACTGTATG
TAATGTATCGTCCATTTTTTGATATAAAATGTCTGATAAATGTATAAATA
CGGCCATGACAGATGTTTGCCGCCGGGAAGAAGAAAGGAATGCGCGACTA
CACCGACTACCAGGGGCCTCGCGAGGTAGGCCTTTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTTTACCTACATTCGCTCATTCCCCCC
CCTTCCCTTTCCATCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCTTCTCTCCCTCTACCTACATTCGCTCATTCCCCCCCTTCCC
TTTCCATCTTCCCTCCCTCCCTCCCTCCCTCCCGCCCAGTCGGCGGGCAT
CGTTGACTTCACGCTTAGCTGGTTGGAAGCACATGGCGCCCCCCCTGAGG
TGCATCAACTGCTCGACTCGAGGGAGTATGAGGACGCCTGCTCAGGTAAG
GAGGGAGGGAGTGAAAGAGGGAGGGAAAGAGGGAAGGAGGGATCGTCCGT
GCCATCACTCCCTCTACTCGTCTCCTCGTTGGAAAGGCACATGACACCAC
CCACATCCCCCCCCCCCTTCCTTCTTTCCTCCCTCCCTCCCTCCCAGGCC
CCATTATCTGCTCCCTGGCTGCCCTTCCCCATCTCCTTGACACGGGCAAG
TCCGGACGTGAGGCCTACCTTACCACCCTCCTGGAAGTAGCCAAAAAGAA
TCGCAAAGGACCCTTCCGGTAAGCCACTCCTCTCTCCCTCCCTCTCAATT
TTTTGGGGGCCTTCCCTTCCTCCCTCTTCCTCTTGTTACTTTTTACTTTC
TCTCACCGCATCTAGGATTTCCCTCAATGTGTCACTTCCGCCTGCCCTCC
CTCCCTCTTTCCCTCCCTCCCTCCCTTCCTCCCTACCTCAGCCTCTTTTG
GACAGAAGGTGGGGCTCAGCCCGCGGCTGAAGAGGCCTTAGGCCTGACGT
TTGGATTCCCGGCTGTGGCGGCCTTGAGCAAGGTACGGAGGGAGGGAAGG
AGGGAGGGAAGGAGGAAGGGCGTGGGTGAGTGGGTGTGGACACTCACGTG
AAAAGATCACTGCACAAACGTAAAGCTTACACTCTACCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCTGCAGGAAAAGGGCGTGTTCGCGACG
TTTAAGGGCTCATTTAACGCCGAGTCTATCACCTCCTTTCTGGTCGGCCT
GACGACGGGGAAAGAGGTCACGGCGCCGCTACCCGGGGGAAAGCTCGTGG
TAGTACCAGCATCGGCGTGGGATGGGAAGGAGGCAGTGGTGGTGGAGGAG
GAAGAGTTCTCGCTTGAGGATATTATGGGGGAGGAGGTGAGGAGAGGGAG
GGAGAGAGGGGAAACCCGCTTGGCAAAGGCACCCCTGCTTTTGTTTGTTA
TATTGTTGGCATCGAAGTCTTTTCGTTCACTTTCTCCCATCTCCCACCCA
CACTGTCATGCACGCAGCTCTAATGTCGACGAGGGAGAGGAGGAGGAGGA
GGAGGAAAAGCTGACGGAGGAAAGAGTCGATCGAAAGGACGGCGAGAGAA
TGCATTGTTCAGGGACGCCGG back to topCoding sequence (CDS) from alignment at scaffold_14:42158..44478- >mRNA_5914 ID=mRNA_5914|Name=jgi.p|Nanoce1779_2|593107|organism=Nannochloropsis oceanica|type=CDS|length=3564bp|location=Sequence derived from alignment at scaffold_14:42158..44478- (Nannochloropsis oceanica)
CTCTAAGAAAAGGGCGTGTTCGCGACGTTTAAGGGCTCATTTAACGCCGA
GTCTATCACCTCCTTTCTGGTCGGCCTGACGACGGGGAAAGAGGTCACGG
CGCCGCTACCCGGGGGAAAGCTCGTGGTAGTACCAGCATCGGCGTGGGAT
GGGAAGGAGGCAGTGGTGGTGGAGGAGGAAGAGTTCTCGCTTGAGGATAT
TATGGGGGAGGAGCCTCTTTTGGACAGAAGGTGGGGCTCAGCCCGCGGCT
GAAGAGGCCTTAGGCCTGACGTTTGGATTCCCGGCTGTGGCGGCCTTGAG
CAAGGCCCCATTATCTGCTCCCTGGCTGCCCTTCCCCATCTCCTTGACAC
GGGCAAGTCCGGACGTGAGGCCTACCTTACCACCCTCCTGGAAGTAGCCA
AAAAGAATCGCAAAGGACCCTTCCGTCGGCGGGCATCGTTGACTTCACGC
TTAGCTGGTTGGAAGCACATGGCGCCCCCCCTGAGGTGCATCAACTGCTC
GACTCGAGGGAGTATGAGGACGCCTGCTCAGATGTTTGCCGCCGGGAAGA
AGAAAGGAATGCGCGACTACACCGACTACCAGGGGCCTCGCGAGCTCTAA
GAAAAGGGCGTGTTCGCGACGTTTAAGGGCTCATTTAACGCCGAGTCTAT
CACCTCCTTTCTGGTCGGCCTGACGACGGGGAAAGAGGTCACGGCGCCGC
TACCCGGGGGAAAGCTCGTGGTAGTACCAGCATCGGCGTGGGATGGGAAG
GAGGCAGTGGTGGTGGAGGAGGAAGAGTTCTCGCTTGAGGATATTATGGG
GGAGGAGCCTCTTTTGGACAGAAGGTGGGGCTCAGCCCGCGGCTGAAGAG
GCCTTAGGCCTGACGTTTGGATTCCCGGCTGTGGCGGCCTTGAGCAAGGC
CCCATTATCTGCTCCCTGGCTGCCCTTCCCCATCTCCTTGACACGGGCAA
GTCCGGACGTGAGGCCTACCTTACCACCCTCCTGGAAGTAGCCAAAAAGA
ATCGCAAAGGACCCTTCCGTCGGCGGGCATCGTTGACTTCACGCTTAGCT
GGTTGGAAGCACATGGCGCCCCCCCTGAGGTGCATCAACTGCTCGACTCG
AGGGAGTATGAGGACGCCTGCTCAGATGTTTGCCGCCGGGAAGAAGAAAG
GAATGCGCGACTACACCGACTACCAGGGGCCTCGCGAGCTCTAAGAAAAG
GGCGTGTTCGCGACGTTTAAGGGCTCATTTAACGCCGAGTCTATCACCTC
CTTTCTGGTCGGCCTGACGACGGGGAAAGAGGTCACGGCGCCGCTACCCG
GGGGAAAGCTCGTGGTAGTACCAGCATCGGCGTGGGATGGGAAGGAGGCA
GTGGTGGTGGAGGAGGAAGAGTTCTCGCTTGAGGATATTATGGGGGAGGA
GCCTCTTTTGGACAGAAGGTGGGGCTCAGCCCGCGGCTGAAGAGGCCTTA
GGCCTGACGTTTGGATTCCCGGCTGTGGCGGCCTTGAGCAAGGCCCCATT
ATCTGCTCCCTGGCTGCCCTTCCCCATCTCCTTGACACGGGCAAGTCCGG
ACGTGAGGCCTACCTTACCACCCTCCTGGAAGTAGCCAAAAAGAATCGCA
AAGGACCCTTCCGTCGGCGGGCATCGTTGACTTCACGCTTAGCTGGTTGG
AAGCACATGGCGCCCCCCCTGAGGTGCATCAACTGCTCGACTCGAGGGAG
TATGAGGACGCCTGCTCAGATGTTTGCCGCCGGGAAGAAGAAAGGAATGC
GCGACTACACCGACTACCAGGGGCCTCGCGAGCTCTAAGAAAAGGGCGTG
TTCGCGACGTTTAAGGGCTCATTTAACGCCGAGTCTATCACCTCCTTTCT
GGTCGGCCTGACGACGGGGAAAGAGGTCACGGCGCCGCTACCCGGGGGAA
AGCTCGTGGTAGTACCAGCATCGGCGTGGGATGGGAAGGAGGCAGTGGTG
GTGGAGGAGGAAGAGTTCTCGCTTGAGGATATTATGGGGGAGGAGCCTCT
TTTGGACAGAAGGTGGGGCTCAGCCCGCGGCTGAAGAGGCCTTAGGCCTG
ACGTTTGGATTCCCGGCTGTGGCGGCCTTGAGCAAGGCCCCATTATCTGC
TCCCTGGCTGCCCTTCCCCATCTCCTTGACACGGGCAAGTCCGGACGTGA
GGCCTACCTTACCACCCTCCTGGAAGTAGCCAAAAAGAATCGCAAAGGAC
CCTTCCGTCGGCGGGCATCGTTGACTTCACGCTTAGCTGGTTGGAAGCAC
ATGGCGCCCCCCCTGAGGTGCATCAACTGCTCGACTCGAGGGAGTATGAG
GACGCCTGCTCAGATGTTTGCCGCCGGGAAGAAGAAAGGAATGCGCGACT
ACACCGACTACCAGGGGCCTCGCGAGCTCTAAGAAAAGGGCGTGTTCGCG
ACGTTTAAGGGCTCATTTAACGCCGAGTCTATCACCTCCTTTCTGGTCGG
CCTGACGACGGGGAAAGAGGTCACGGCGCCGCTACCCGGGGGAAAGCTCG
TGGTAGTACCAGCATCGGCGTGGGATGGGAAGGAGGCAGTGGTGGTGGAG
GAGGAAGAGTTCTCGCTTGAGGATATTATGGGGGAGGAGCCTCTTTTGGA
CAGAAGGTGGGGCTCAGCCCGCGGCTGAAGAGGCCTTAGGCCTGACGTTT
GGATTCCCGGCTGTGGCGGCCTTGAGCAAGGCCCCATTATCTGCTCCCTG
GCTGCCCTTCCCCATCTCCTTGACACGGGCAAGTCCGGACGTGAGGCCTA
CCTTACCACCCTCCTGGAAGTAGCCAAAAAGAATCGCAAAGGACCCTTCC
GTCGGCGGGCATCGTTGACTTCACGCTTAGCTGGTTGGAAGCACATGGCG
CCCCCCCTGAGGTGCATCAACTGCTCGACTCGAGGGAGTATGAGGACGCC
TGCTCAGATGTTTGCCGCCGGGAAGAAGAAAGGAATGCGCGACTACACCG
ACTACCAGGGGCCTCGCGAGCTCTAAGAAAAGGGCGTGTTCGCGACGTTT
AAGGGCTCATTTAACGCCGAGTCTATCACCTCCTTTCTGGTCGGCCTGAC
GACGGGGAAAGAGGTCACGGCGCCGCTACCCGGGGGAAAGCTCGTGGTAG
TACCAGCATCGGCGTGGGATGGGAAGGAGGCAGTGGTGGTGGAGGAGGAA
GAGTTCTCGCTTGAGGATATTATGGGGGAGGAGCCTCTTTTGGACAGAAG
GTGGGGCTCAGCCCGCGGCTGAAGAGGCCTTAGGCCTGACGTTTGGATTC
CCGGCTGTGGCGGCCTTGAGCAAGGCCCCATTATCTGCTCCCTGGCTGCC
CTTCCCCATCTCCTTGACACGGGCAAGTCCGGACGTGAGGCCTACCTTAC
CACCCTCCTGGAAGTAGCCAAAAAGAATCGCAAAGGACCCTTCCGTCGGC
GGGCATCGTTGACTTCACGCTTAGCTGGTTGGAAGCACATGGCGCCCCCC
CTGAGGTGCATCAACTGCTCGACTCGAGGGAGTATGAGGACGCCTGCTCA
GATGTTTGCCGCCGGGAAGAAGAAAGGAATGCGCGACTACACCGACTACC
AGGGGCCTCGCGAG back to top
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