Properties
| Property Name | Value |
|---|
| TranscriptId | 590863 |
| Track | FilteredModels2 |
| ProteinId | 590777 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_11 | supercontig | scaffold_11:903843..906140 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5903 ID=mRNA_5903|Name=jgi.p|Nanoce1779_2|590777|organism=Nannochloropsis oceanica|type=mRNA|length=1162bp
CGCCCTCGTTCTTTACCACCGCGGCATCCTTCTCTTCCTCGTCCTCGTCG
TCACCGAATGGAAGAGGAGGGGGAGGAGGAGGGGAAGGCGAAGGCGCGAC
GGAGGACATGAAAGGGTATGACGCTCACCCCTCCATGTTCGCCCCATCGG
GCCGCATCCCGCAGGTGGAGTATGCACGCGAGGCTGTTAACCACGGCCAG
CCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCTCGTGGGTCGAAA
AATGCTCGAGTCCAAGAAACTACAAGATGGCCGCCTGCGTCAGAAACTCT
ACCGCGTGGACCGGCACGTGTTGGTGGGCGTAACGGGCATGACAGCTGAC
GCCTTGGCATTGGTACGCCTGGCCCGGGCGTATGCCCAGGAATACCGTCG
GACTTACAGCGAGCCCGTCCCTGTGCGTCATCTTGCCGAACACATTTGTG
ATGTAAAGCATACCTGCACGATGATTCCCCATCGTCCGTTCGGCGTCTCC
CTCCTCGTGGCCGGCTGGGACTCGACGCACGGCTACCAGCTTTACAAGAC
TGACCCGTCCGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGA
AACACGACGTGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCC
TCTGGCTCATCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGC
CTGTGCTACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTG
TCGACGGGAAGGGTGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAG
GGTCTGTAGAGGCATGTGAGGGTGAGCTGGAGATGGCGGTGGTAAAGGGA
GGGGAGGTTTACTTTTTAGAGCAAACGGACGTGAAGGCGGCGTTGAGGGC
GAGGCCCAGATAGGGTCAGGTGGTGGACGAGGTCGAAAAGATCGGGGAGA
AGAACAAGAAGGAAGGAGACGAGAAATGGTGGGCAGTATGTAGCTGCTGT
CACGAATGTAGCGATGCATTGAACATAAATTGAACAATACTAGAGGCTAA
CTAATCCTTAGCCCATGTCGATCCCCTAAAAACAGAATCAACTCAATCAA
ACTTAACTCAATTCGACTCGAAATAGGGGGAAAAAGAATCAATTCAAGTC
ATTAAATTCCAA back to topprotein sequence of jgi.p|Nanoce1779_2|590777 >mRNA_5903-protein ID=mRNA_5903-protein|Name=jgi.p|Nanoce1779_2|590777|organism=Nannochloropsis oceanica|type=polypeptide|length=234bp
MKGYDAHPSMFAPSGRIPQVEYAREAVNHGQPLVGIKAKDGVVLVGRKML
ESKKLQDGRLRQKLYRVDRHVLVGVTGMTADALALVRLARAYAQEYRRTY
SEPVPVRHLAEHICDVKHTCTMIPHRPFGVSLLVAGWDSTHGYQLYKTDP
SASYEAWRAVAVGEKHDVLTQRLASSPLLNSSGSSPSPPSLENACALACA
TALVEGGREGSPLGVDGKGEGWESAMKGSRKGL* back to topmRNA from alignment at scaffold_11:903843..906140- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5903 ID=mRNA_5903|Name=jgi.p|Nanoce1779_2|590777|organism=Nannochloropsis oceanica|type=mRNA|length=2298bp|location=Sequence derived from alignment at scaffold_11:903843..906140- (Nannochloropsis oceanica)
CGCCCTCGTTCTTTACCACCGCGGCATCCTTCTCTTCCTCGTCCTCGTCG
TCACCGAATGGAAGAGGAGGGGGAGGAGGAGGGGAAGGCGAAGGCGCGAC
GGAGGACATGAAAGGGTATGACGCTCACCCCTCCATGTTCGCCCCATCGG
GCCGCATCCCGCAGGTGGAGTATGCACGCGAGGTGAGGAGGAAGGAAGGG
ACAGGAAGAGGGGAGGGAGGAGAGGGGGGGAGGAAGGGGAGGGATTATGG
AAAGGAAAATGAGGAGGGAGGGGAAGACTCGTCAAGCGAAGCAAGGCTAC
TGGAAATGGGGGAAGTGCACGTCAAGCGGTAAAGACAGCGAAACATTTAC
TCATTCCCTCCCTCCTTTCCTCTTTCCCTCCCTCCCTCCCTCCCTCTCAT
CTTTCTTCCTTTCCCGCAGGCTGTTAACCACGGCCAGCCCCTCGTGGGCA
TCAAGGCCAAGGACGGCGTTGTCCTCGTGGGTCGAAAAATGCTCGAGTCC
AAGAAACTACAAGTACGTCCCCCCTCCCTCCCTCATCTCCTCCTTCCCTC
CTTCCCTTCCTCTCTCCCTTCCTTTTTCCTTCACTCCCTTCCTTTCTGTC
TTGTCCTCCCTTGGGATGAGGGGTCACATCATCTCCTTGCTTCCCTCGCT
TCCACCCCCTGGTAGGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGA
CCGGCACGTGTTGGTGGGCGTAACGGGCATGACAGCTGACGCCTTGGCAT
TGGTGAGGAGGGAGGGAGAGAGGGAGGGAGGGAGGAAAGTAGGCATGAGT
GTGTAAATGATGAGGACGCAGATAGCTTAGTGGTCTAGCGGGCGGGGCCT
CGAGCCTCTGCCCTCCGTGAGACGACACAAAATCCAATTGATCCTACTGA
CAAACACTCACACACATTAATACTTATCAACACACATATATATTGTGTGT
ATGTATGCATATATACATATATACATATATCTCTCAAGATGACGATGATG
CGCCGAAGTCAATCTGTTCGTCTGTCTCCTTCTCACCCCTTCCTTCCCCC
CTCCGTCCCTCCCTCCCTCAGGTACGCCTGGCCCGGGCGTATGCCCAGGA
ATACCGTCGGACTTACAGCGAGCCCGTCCCTGTGCGTCATCTTGCCGAAC
ACATTTGTGATGTAAAGCATACCTGCACGATGGTACGTCTCCCTCCCTCC
CTCCCTCCCTCCCTTCTTTCCTGTCTTCTCCCTCCCTCCCGTTTACCACC
ACGCCGAATGTTCGTCTTATGTTGAGGATGAATGTGTGAAGACAGGCACG
TCTCCCTGCCCTCCCTCTTCCCCCCTTTCCCTCTCTCCCGCCCTCCCCCC
CTTTCCCCATCCATCACCATCCGTCCACCCCTCCCTCCCTTCCTTCTTCA
TTTCCTAGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGC
TGGGACTCGACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTAG
GTAGGGAGGGAGGGCGGTAGGGAGGGAGGGTGGGTGGGCAGGAACAAGAG
CATGGATACTAGGCGGGCCGTTGGGAAGGGAGGGAGAAACGGTTCATGGA
GATTCAATTTTCGATGGGTGATGTCTCGGCGAATTTAAAGGGGTTCTTTA
TCTCACCATCCCTCCCTCCCTCCCTCCCCATTTCACGACCGTTACAGCAA
GTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAACACGACGTGCTC
ACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCTGGCTCATCCCC
TTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTGTGCTACGGCCC
TGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCGACGGGAAGGGT
GAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGTCTGTAGAGGCA
TGTGAGGGTGAGCTGGAGATGGCGGTGGTAAAGGGAGGGGAGGTTTACTT
TTTAGAGCAAACGGACGTGAAGGCGGCGTTGAGGGCGAGGCCCAGATAGG
GTCAGGTGGTGGACGAGGTCGAAAAGATCGGGGAGAAGAACAAGAAGGAA
GGAGACGAGAAATGGTGGGCAGTATGTAGCTGCTGTCACGAATGTAGCGA
TGCATTGAACATAAATTGAACAATACTAGAGGCTAACTAATCCTTAGCCC
ATGTCGATCCCCTAAAAACAGAATCAACTCAATCAAACTTAACTCAATTC
GACTCGAAATAGGGGGAAAAAGAATCAATTCAAGTCATTAAATTCCAA back to topCoding sequence (CDS) from alignment at scaffold_11:903843..906140- >mRNA_5903 ID=mRNA_5903|Name=jgi.p|Nanoce1779_2|590777|organism=Nannochloropsis oceanica|type=CDS|length=4212bp|location=Sequence derived from alignment at scaffold_11:903843..906140- (Nannochloropsis oceanica)
CAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAACACGACGTG
CTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCTGGCTCATC
CCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTGTGCTACGG
CCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCGACGGGAAG
GGTGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGTCTGTAGAT
TCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGCTGGGACTCGA
CGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTACGCCTGGCCCG
GGCGTATGCCCAGGAATACCGTCGGACTTACAGCGAGCCCGTCCCTGTGC
GTCATCTTGCCGAACACATTTGTGATGTAAAGCATACCTGCACGATGGAT
GGCCGCCTGCGTCAGAAACTCTACCGCGTGGACCGGCACGTGTTGGTGGG
CGTAACGGGCATGACAGCTGACGCCTTGGCATTGGCTGTTAACCACGGCC
AGCCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCTCGTGGGTCGA
AAAATGCTCGAGTCCAAGAAACTACAAATGAAAGGGTATGACGCTCACCC
CTCCATGTTCGCCCCATCGGGCCGCATCCCGCAGGTGGAGTATGCACGCG
AGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAACACGACG
TGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCTGGCTCA
TCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTGTGCTAC
GGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCGACGGGA
AGGGTGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGTCTGTAG
ATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGCTGGGACTC
GACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTACGCCTGGCC
CGGGCGTATGCCCAGGAATACCGTCGGACTTACAGCGAGCCCGTCCCTGT
GCGTCATCTTGCCGAACACATTTGTGATGTAAAGCATACCTGCACGATGG
ATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGACCGGCACGTGTTGGTG
GGCGTAACGGGCATGACAGCTGACGCCTTGGCATTGGCTGTTAACCACGG
CCAGCCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCTCGTGGGTC
GAAAAATGCTCGAGTCCAAGAAACTACAAATGAAAGGGTATGACGCTCAC
CCCTCCATGTTCGCCCCATCGGGCCGCATCCCGCAGGTGGAGTATGCACG
CGAGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAACACGA
CGTGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCTGGCT
CATCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTGTGCT
ACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCGACGG
GAAGGGTGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGTCTGT
AGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGCTGGGAC
TCGACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTACGCCTGG
CCCGGGCGTATGCCCAGGAATACCGTCGGACTTACAGCGAGCCCGTCCCT
GTGCGTCATCTTGCCGAACACATTTGTGATGTAAAGCATACCTGCACGAT
GGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGACCGGCACGTGTTGG
TGGGCGTAACGGGCATGACAGCTGACGCCTTGGCATTGGCTGTTAACCAC
GGCCAGCCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCTCGTGGG
TCGAAAAATGCTCGAGTCCAAGAAACTACAAATGAAAGGGTATGACGCTC
ACCCCTCCATGTTCGCCCCATCGGGCCGCATCCCGCAGGTGGAGTATGCA
CGCGAGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAACAC
GACGTGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCTGG
CTCATCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTGTG
CTACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCGAC
GGGAAGGGTGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGTCT
GTAGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGCTGGG
ACTCGACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTACGCCT
GGCCCGGGCGTATGCCCAGGAATACCGTCGGACTTACAGCGAGCCCGTCC
CTGTGCGTCATCTTGCCGAACACATTTGTGATGTAAAGCATACCTGCACG
ATGGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGACCGGCACGTGTT
GGTGGGCGTAACGGGCATGACAGCTGACGCCTTGGCATTGGCTGTTAACC
ACGGCCAGCCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCTCGTG
GGTCGAAAAATGCTCGAGTCCAAGAAACTACAAATGAAAGGGTATGACGC
TCACCCCTCCATGTTCGCCCCATCGGGCCGCATCCCGCAGGTGGAGTATG
CACGCGAGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAAC
ACGACGTGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCT
GGCTCATCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTG
TGCTACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCG
ACGGGAAGGGTGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGT
CTGTAGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGCTG
GGACTCGACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTACGC
CTGGCCCGGGCGTATGCCCAGGAATACCGTCGGACTTACAGCGAGCCCGT
CCCTGTGCGTCATCTTGCCGAACACATTTGTGATGTAAAGCATACCTGCA
CGATGGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGACCGGCACGTG
TTGGTGGGCGTAACGGGCATGACAGCTGACGCCTTGGCATTGGCTGTTAA
CCACGGCCAGCCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCTCG
TGGGTCGAAAAATGCTCGAGTCCAAGAAACTACAAATGAAAGGGTATGAC
GCTCACCCCTCCATGTTCGCCCCATCGGGCCGCATCCCGCAGGTGGAGTA
TGCACGCGAGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAA
ACACGACGTGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCT
CTGGCTCATCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCC
TGTGCTACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGT
CGACGGGAAGGGTGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGG
GTCTGTAGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGC
TGGGACTCGACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTAC
GCCTGGCCCGGGCGTATGCCCAGGAATACCGTCGGACTTACAGCGAGCCC
GTCCCTGTGCGTCATCTTGCCGAACACATTTGTGATGTAAAGCATACCTG
CACGATGGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGACCGGCACG
TGTTGGTGGGCGTAACGGGCATGACAGCTGACGCCTTGGCATTGGCTGTT
AACCACGGCCAGCCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCT
CGTGGGTCGAAAAATGCTCGAGTCCAAGAAACTACAAATGAAAGGGTATG
ACGCTCACCCCTCCATGTTCGCCCCATCGGGCCGCATCCCGCAGGTGGAG
TATGCACGCGAG back to top
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