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Properties
| Property Name | Value |
|---|
| TranscriptId | 577931 |
| Track | FilteredModels2 |
| ProteinId | 577845 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1442799..1444188 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_582 ID=mRNA_582|Name=jgi.p|Nanoce1779_2|577845|organism=Nannochloropsis oceanica|type=mRNA|length=1390bp
CAAGGTTCAGACCGTGGGAATGAATATCTCCATCCTCGAGAACTTGGAGG
GACTGTTCGTGTACATGACCTATTTCCTGTACTACATTTATGCCGTCAAC
GCCGCGATCGCCCTCCTCTCCCTCCTCTTCACCGGCGCCACTCTCGAGAT
TCTAGTGGGCAAATTCTGCTCCACCCGCGGATGTGGCGGTGGATTCAAAC
GCTTTTCTGTCCGGTCCGTGCAAGCGTTCTTCTTTCCCCTCTCCTACATC
GGCTTCCTGGCTACGCTGGGCCTTTTTCTGCTCACCGTCCTCCTCGCCTC
CCTCGTCCTCACGACCAACCAAGCTTGCGGTGCCGGAGCCACCCTCGGGG
CGGATGCCGCCGCTGCTAGCCTCTCTGCGGTGCTTAACACAGTCACTCAT
TGGATGGGCCTCAAGTCCGTGGCCATTTCGGGCGCCGAGCTGGCTGGATA
TTGCGCGAGCCCGCATGCCCTGTCCTCGTGGTTCTGGCGAATGACCTTCA
TCTATGTGGCCGCCGCCACCATCTTCCAAGCGAACCTGGCAGTCTCCGCC
TGGACAATCTTCTTGAACACGGGCCACGAGATGAAGAAGGCCGAGCTGGG
ACGGGCACACGCGGAGCAGCTGACGCAGGTGCTGGCCAAGGCCGGGAGGG
AAGGAGGGGTGATGATGAAGAGGCCGCGCTCGGTGTCGAGCATGGGAGGG
AGAGGAAGGCCATATGCCAGCAGCAGGGCAGAGGCGAAGGAGGCGGAGTA
CTACTACGACGATGATATTTGTTAAATGGAGGGAGAGAGTTGCACAGATT
ATTCAAGATTATACACGCACACGGACAAGAGTTTTTTCCAATCTACTATC
ATTACTATATTATCAATAAAATTGTTGATGTTAATGGTCATCGTATTCCA
TAAAGAGATATCTGAGCACCGAGGTGCATGAAGGCGAAAGAGAAGGAAGG
GAGGGAGAGAAGGATGGTCAGGGATTCTGTTTTGAGGACGAGATTGAGAT
AAGAAACGGGAGGACAGAAGAGAGAGGGAACAGCGAATCTTTCGCAAAGC
AGCCATAAAATGTTTGTTTCGGAGCGCCCACAGTATATACACACCACGAC
GACACGAAGAGGGGGACAGGGGGAAAATGACGGGAGAGCAGGGAGGAGCA
AGGGAGGTGAGAGAGAAAAGGCACGCAGGGGAGACGGGAGGGAGGGAGGA
AGAAGAGGAAAGGAGGGGCTATGGCCCTCCAAAGACTCTTCTTGCTCGCT
CATATTTACTCAAGAGAAAAGGAACTACAGATACCCCGACCTTCCCAGGC
GCCGCGCACATAAACAGATACAGAAAAAAGACCAAGAGGAAGAAAAAGAA
AGGGAAAAAACAGCATATCACACCAGCCGTGGACTCACAA back to topprotein sequence of jgi.p|Nanoce1779_2|577845 >mRNA_582-protein ID=mRNA_582-protein|Name=jgi.p|Nanoce1779_2|577845|organism=Nannochloropsis oceanica|type=polypeptide|length=252bp
MNISILENLEGLFVYMTYFLYYIYAVNAAIALLSLLFTGATLEILVGKFC
STRGCGGGFKRFSVRSVQAFFFPLSYIGFLATLGLFLLTVLLASLVLTTN
QACGAGATLGADAAAASLSAVLNTVTHWMGLKSVAISGAELAGYCASPHA
LSSWFWRMTFIYVAAATIFQANLAVSAWTIFLNTGHEMKKAELGRAHAEQ
LTQVLAKAGREGGVMMKRPRSVSSMGGRGRPYASSRAEAKEAEYYYDDDI
C* back to topmRNA from alignment at scaffold_3:1442799..1444188- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_582 ID=mRNA_582|Name=jgi.p|Nanoce1779_2|577845|organism=Nannochloropsis oceanica|type=mRNA|length=1390bp|location=Sequence derived from alignment at scaffold_3:1442799..1444188- (Nannochloropsis oceanica)
CAAGGTTCAGACCGTGGGAATGAATATCTCCATCCTCGAGAACTTGGAGG
GACTGTTCGTGTACATGACCTATTTCCTGTACTACATTTATGCCGTCAAC
GCCGCGATCGCCCTCCTCTCCCTCCTCTTCACCGGCGCCACTCTCGAGAT
TCTAGTGGGCAAATTCTGCTCCACCCGCGGATGTGGCGGTGGATTCAAAC
GCTTTTCTGTCCGGTCCGTGCAAGCGTTCTTCTTTCCCCTCTCCTACATC
GGCTTCCTGGCTACGCTGGGCCTTTTTCTGCTCACCGTCCTCCTCGCCTC
CCTCGTCCTCACGACCAACCAAGCTTGCGGTGCCGGAGCCACCCTCGGGG
CGGATGCCGCCGCTGCTAGCCTCTCTGCGGTGCTTAACACAGTCACTCAT
TGGATGGGCCTCAAGTCCGTGGCCATTTCGGGCGCCGAGCTGGCTGGATA
TTGCGCGAGCCCGCATGCCCTGTCCTCGTGGTTCTGGCGAATGACCTTCA
TCTATGTGGCCGCCGCCACCATCTTCCAAGCGAACCTGGCAGTCTCCGCC
TGGACAATCTTCTTGAACACGGGCCACGAGATGAAGAAGGCCGAGCTGGG
ACGGGCACACGCGGAGCAGCTGACGCAGGTGCTGGCCAAGGCCGGGAGGG
AAGGAGGGGTGATGATGAAGAGGCCGCGCTCGGTGTCGAGCATGGGAGGG
AGAGGAAGGCCATATGCCAGCAGCAGGGCAGAGGCGAAGGAGGCGGAGTA
CTACTACGACGATGATATTTGTTAAATGGAGGGAGAGAGTTGCACAGATT
ATTCAAGATTATACACGCACACGGACAAGAGTTTTTTCCAATCTACTATC
ATTACTATATTATCAATAAAATTGTTGATGTTAATGGTCATCGTATTCCA
TAAAGAGATATCTGAGCACCGAGGTGCATGAAGGCGAAAGAGAAGGAAGG
GAGGGAGAGAAGGATGGTCAGGGATTCTGTTTTGAGGACGAGATTGAGAT
AAGAAACGGGAGGACAGAAGAGAGAGGGAACAGCGAATCTTTCGCAAAGC
AGCCATAAAATGTTTGTTTCGGAGCGCCCACAGTATATACACACCACGAC
GACACGAAGAGGGGGACAGGGGGAAAATGACGGGAGAGCAGGGAGGAGCA
AGGGAGGTGAGAGAGAAAAGGCACGCAGGGGAGACGGGAGGGAGGGAGGA
AGAAGAGGAAAGGAGGGGCTATGGCCCTCCAAAGACTCTTCTTGCTCGCT
CATATTTACTCAAGAGAAAAGGAACTACAGATACCCCGACCTTCCCAGGC
GCCGCGCACATAAACAGATACAGAAAAAAGACCAAGAGGAAGAAAAAGAA
AGGGAAAAAACAGCATATCACACCAGCCGTGGACTCACAA back to topCoding sequence (CDS) from alignment at scaffold_3:1442799..1444188- >mRNA_582 ID=mRNA_582|Name=jgi.p|Nanoce1779_2|577845|organism=Nannochloropsis oceanica|type=CDS|length=756bp|location=Sequence derived from alignment at scaffold_3:1442799..1444188- (Nannochloropsis oceanica)
ATGAATATCTCCATCCTCGAGAACTTGGAGGGACTGTTCGTGTACATGAC
CTATTTCCTGTACTACATTTATGCCGTCAACGCCGCGATCGCCCTCCTCT
CCCTCCTCTTCACCGGCGCCACTCTCGAGATTCTAGTGGGCAAATTCTGC
TCCACCCGCGGATGTGGCGGTGGATTCAAACGCTTTTCTGTCCGGTCCGT
GCAAGCGTTCTTCTTTCCCCTCTCCTACATCGGCTTCCTGGCTACGCTGG
GCCTTTTTCTGCTCACCGTCCTCCTCGCCTCCCTCGTCCTCACGACCAAC
CAAGCTTGCGGTGCCGGAGCCACCCTCGGGGCGGATGCCGCCGCTGCTAG
CCTCTCTGCGGTGCTTAACACAGTCACTCATTGGATGGGCCTCAAGTCCG
TGGCCATTTCGGGCGCCGAGCTGGCTGGATATTGCGCGAGCCCGCATGCC
CTGTCCTCGTGGTTCTGGCGAATGACCTTCATCTATGTGGCCGCCGCCAC
CATCTTCCAAGCGAACCTGGCAGTCTCCGCCTGGACAATCTTCTTGAACA
CGGGCCACGAGATGAAGAAGGCCGAGCTGGGACGGGCACACGCGGAGCAG
CTGACGCAGGTGCTGGCCAAGGCCGGGAGGGAAGGAGGGGTGATGATGAA
GAGGCCGCGCTCGGTGTCGAGCATGGGAGGGAGAGGAAGGCCATATGCCA
GCAGCAGGGCAGAGGCGAAGGAGGCGGAGTACTACTACGACGATGATATT
TGTTAA back to top
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