Properties
| Property Name | Value |
|---|
| TranscriptId | 590390 |
| Track | FilteredModels2 |
| ProteinId | 590304 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_11 | supercontig | scaffold_11:566418..567601 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5783 ID=mRNA_5783|Name=jgi.p|Nanoce1779_2|590304|organism=Nannochloropsis oceanica|type=mRNA|length=1092bp
ATGGCTGGAAAAACTCTGGATTACTTGTTGATTCCGGGCGCAGGGGTTGA
TACGGTAGACTCTTTTTTGGGGGGTTAACGGTGGGTAGGACAAGGGAAAG
CAAGAGGAGGTCAGGCATGCTTAAGAGGGGAAGGCGTTGTAAGATTAATA
GCAAGTAGCAGCCTATCATCATAAATAAAGGCGTGGGTGAATGGCAGGGG
CATGTGAAATTCTTGCCTTTGGGGACCTCACATGACTCCCCCCGTGCGCC
TTACGTTCTACGAAACCTCCCCACTCCTCCACCCATGCAAATCTCTCCAG
TCCACCCTACAACCACCACAGGACAATGGCCACAACCAAAGGACCCCCAG
GACAAGACATATATCCTCATCATTCGAAAAACGTGCCTCCAGCTGAAGAA
TTCAACACAGAAGACGCATTGTTCATGAAACTAGCCTTGGAGGAGGGGAG
TAAAGCCATACAGGAAGGCGAGGTGCCCGTAGGCGTGGTTTTTGTCCATT
ATCCCTTCTCGTCCTCCCTACTTCCTTCATCGAATATCAACAGTTCCAAA
CCATCTTCTATCCTTTCTCATCTTTCTGCTCGAGTCCTGGGACGAGGGCA
CAACCGCACCAATGTCACCAAAAATGGGACCCGGCACGCAGAGCTCGTGG
TGGCGGATGAAATTCTCGCCCTTGGAACGCCGATCGGCGTCTTCCAAGAT
TGTGATGTGTATGTAACATGTGAGCCCTGCATTATGTGTGCGGGTGCTTT
GGGTCTCTTGAAAATTCGGCGTGTGGTATTCGGTTGTAAGAATGAGCGGT
TTGGTGGGTGTGGGTCGATTTTGAATGTGCACGAGGCCCCCCATTTGAGG
CATCGGTATGTGGCGCAAGCGGGTTTGATGGAGGAAGAGGCCGTGACACT
ATTCAAAAACTTCTATGCACGAGAAAATCAGCAAGCACCCGTGTCCAAAC
GAAGGAAAAAAGGGCAAGGCATCAACGAAGAGGGCCAAGAATCAATTCAT
AGAGTACCCTCAGCAGCAGCAGCAGCAGCAACAACAACAACAGAATCAAA
AAATGCCTATGATACACCTTCGTGACACGGAAATAGAGAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|590304 >mRNA_5783-protein ID=mRNA_5783-protein|Name=jgi.p|Nanoce1779_2|590304|organism=Nannochloropsis oceanica|type=polypeptide|length=250bp
MATTKGPPGQDIYPHHSKNVPPAEEFNTEDALFMKLALEEGSKAIQEGEV
PVGVVFVHYPFSSSLLPSSNINSSKPSSILSHLSARVLGRGHNRTNVTKN
GTRHAELVVADEILALGTPIGVFQDCDVYVTCEPCIMCAGALGLLKIRRV
VFGCKNERFGGCGSILNVHEAPHLRHRYVAQAGLMEEEAVTLFKNFYARE
NQQAPVSKRRKKGQGINEEGQESIHRVPSAAAAAATTTTESKNAYDTPS* back to topmRNA from alignment at scaffold_11:566418..567601- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5783 ID=mRNA_5783|Name=jgi.p|Nanoce1779_2|590304|organism=Nannochloropsis oceanica|type=mRNA|length=1184bp|location=Sequence derived from alignment at scaffold_11:566418..567601- (Nannochloropsis oceanica)
ATGGCTGGAAAAACTCTGGATTACTTGTTGATTCCGGGCGCAGGGGTTGA
TACGGTAGACTCTTTTTTGGGGGGTTAACGGTGGGTAGGACAAGGGAAAG
CAAGAGGAGGTCAGGCATGCTTAAGAGGGGAAGGCGTTGTAAGATTAATA
GCAAGTAGCAGCCTATCATCATAAATAAAGGCGTGGGTGAATGGCAGGGG
CATGTGAAATTCTTGCCTTTGGGGACCTCACATGACTCCCCCCGTGCGCC
TTACGTTCTACGAAACCTCCCCACTCCTCCACCCATGCAAATCTCTCCAG
TCCACCCTACAACCACCACAGGACAATGGCCACAACCAAAGGACCCCCAG
GACAAGACATATATCCTCATCATTCGAAAAACGTGCCTCCAGCTGAAGAA
TTCAACACAGAAGACGCATTGTTCATGAAACTAGCCTTGGAGGAGGGGAG
TAAAGCCATACAGGAAGGCGAGGTGCCCGTAGGCGTGGTTTTTGTCCATT
ATCCCTTCTCGTCCTCCCTACTTCCTTCATCGAATATCAACAGTTCCAAA
CCATCTTCTATCCTTTCTCATCTTTCTGCTCGAGTCCTGGGACGAGGGCA
CAACCGCACCAATGTCACCAAAAATGGGACCCGGCACGCAGAGCTCGTGG
TGGCGGATGAAATTCTCGCCCTTGGAACGCCGATCGGCGTCTTCCAAGAT
TGTGATGTGTATGTAACATGTGAGCCCTGCATTATGTGTGCGGGTGCTTT
GGGTCTCTTGAAAATTCGGCGTGTGGTATTCGGTTGTAAGAATGAGCGGT
TTGGTGGGTGTGGGTCGATTTTGAATGTGCACGAGGCCCCCCATTTGAGG
CATCGGTATGTGGCGCAAGCGGGTTTGATGGAGGAAGAGGCCGTGACACT
ATTCAAAAACTTCTATGCACGAGAAAATCAGCAAGGTACGAGCGAGGAGA
TACGATCTTGATGGCTCTCATGTCGATCTCTTCTAATCCTTTCCTTCATA
CTACCCCACACTCGTTAACCCTCACAGCACCCGTGTCCAAACGAAGGAAA
AAAGGGCAAGGCATCAACGAAGAGGGCCAAGAATCAATTCATAGAGTACC
CTCAGCAGCAGCAGCAGCAGCAACAACAACAACAGAATCAAAAAATGCCT
ATGATACACCTTCGTGACACGGAAATAGAGAGAG back to topCoding sequence (CDS) from alignment at scaffold_11:566418..567601- >mRNA_5783 ID=mRNA_5783|Name=jgi.p|Nanoce1779_2|590304|organism=Nannochloropsis oceanica|type=CDS|length=1500bp|location=Sequence derived from alignment at scaffold_11:566418..567601- (Nannochloropsis oceanica)
CACCCGTGTCCAAACGAAGGAAAAAAGGGCAAGGCATCAACGAAGAGGGC
CAAGAATCAATTCATAGAGTACCCTCAGCAGCAGCAGCAGCAGCAACAAC
AACAACAGAATCAAAAAATGCCTATGATACACCTTCGTGAATGGCCACAA
CCAAAGGACCCCCAGGACAAGACATATATCCTCATCATTCGAAAAACGTG
CCTCCAGCTGAAGAATTCAACACAGAAGACGCATTGTTCATGAAACTAGC
CTTGGAGGAGGGGAGTAAAGCCATACAGGAAGGCGAGGTGCCCGTAGGCG
TGGTTTTTGTCCATTATCCCTTCTCGTCCTCCCTACTTCCTTCATCGAAT
ATCAACAGTTCCAAACCATCTTCTATCCTTTCTCATCTTTCTGCTCGAGT
CCTGGGACGAGGGCACAACCGCACCAATGTCACCAAAAATGGGACCCGGC
ACGCAGAGCTCGTGGTGGCGGATGAAATTCTCGCCCTTGGAACGCCGATC
GGCGTCTTCCAAGATTGTGATGTGTATGTAACATGTGAGCCCTGCATTAT
GTGTGCGGGTGCTTTGGGTCTCTTGAAAATTCGGCGTGTGGTATTCGGTT
GTAAGAATGAGCGGTTTGGTGGGTGTGGGTCGATTTTGAATGTGCACGAG
GCCCCCCATTTGAGGCATCGGTATGTGGCGCAAGCGGGTTTGATGGAGGA
AGAGGCCGTGACACTATTCAAAAACTTCTATGCACGAGAAAATCAGCAAG
CACCCGTGTCCAAACGAAGGAAAAAAGGGCAAGGCATCAACGAAGAGGGC
CAAGAATCAATTCATAGAGTACCCTCAGCAGCAGCAGCAGCAGCAACAAC
AACAACAGAATCAAAAAATGCCTATGATACACCTTCGTGAATGGCCACAA
CCAAAGGACCCCCAGGACAAGACATATATCCTCATCATTCGAAAAACGTG
CCTCCAGCTGAAGAATTCAACACAGAAGACGCATTGTTCATGAAACTAGC
CTTGGAGGAGGGGAGTAAAGCCATACAGGAAGGCGAGGTGCCCGTAGGCG
TGGTTTTTGTCCATTATCCCTTCTCGTCCTCCCTACTTCCTTCATCGAAT
ATCAACAGTTCCAAACCATCTTCTATCCTTTCTCATCTTTCTGCTCGAGT
CCTGGGACGAGGGCACAACCGCACCAATGTCACCAAAAATGGGACCCGGC
ACGCAGAGCTCGTGGTGGCGGATGAAATTCTCGCCCTTGGAACGCCGATC
GGCGTCTTCCAAGATTGTGATGTGTATGTAACATGTGAGCCCTGCATTAT
GTGTGCGGGTGCTTTGGGTCTCTTGAAAATTCGGCGTGTGGTATTCGGTT
GTAAGAATGAGCGGTTTGGTGGGTGTGGGTCGATTTTGAATGTGCACGAG
GCCCCCCATTTGAGGCATCGGTATGTGGCGCAAGCGGGTTTGATGGAGGA
AGAGGCCGTGACACTATTCAAAAACTTCTATGCACGAGAAAATCAGCAAG back to top
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