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Properties
| Property Name | Value |
|---|
| TranscriptId | 590323 |
| Track | FilteredModels2 |
| ProteinId | 590237 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_11 | supercontig | scaffold_11:523993..525485 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5763 ID=mRNA_5763|Name=jgi.p|Nanoce1779_2|590237|organism=Nannochloropsis oceanica|type=mRNA|length=1056bp
ACAGCTACGACATGAAAACCCTTCTCGTCCTGGTCCTGCTGGGGATGCTA
TTTGAGGTGGAGTCGTATCGTCTCCTCCCTGCGATCCGCAAGCGCTGGCG
CCGCCGCCGGCCACCCCCCACCGTGGTCCTGCCTCAGCTTGATTCCTTTA
AACTCATTCCCAGTCAAAAAACTGTGCAAGCACAAGGCTGGCGCGACACC
TTAGTGAGCATCGGCAACGAGCTACATCGTTCAAGCAGCCTCCCGACCAA
GGCCCAAAAAGAGACGATTCGAAGTATTGCCTTGGCGCTCGAAACCGTTC
AACCCACCCCTACAAAAGCACCGGCATTATCTCCTTTTAATCAGGGGCGA
TGGGCCTTGCTCTACACAGACGCACCGGGGATAAGCTCAGGGCGGATAGG
TCCGTTCGGATTGATCAAAGGAAGAGTGTTCCAAGAAGTGGATTTGACAA
CGCGGGGGTATGTGAATATATTGGAGGTAAGCAAGCCGGGACAGGCCCCT
TGGTTGGAAGCGAAGCTGACCGCGGAGTTTCAGGTAGTTGATGATACGGA
TTGGGAAGTGACGTTTAAGGACGTTGTCGGGATGTTGCGGGGAAAGCAAG
TAGTGAAGCAGGTGTTCAGCGGGGTGAGTCGGGTCTGGACGCATACTTAT
TTGGATAGGGAGGGAGGGGTAAGGATTATGAGAGCACGGAGACCGGAGAA
GAGGCCGGAGGACGCGTTTTTGTTTGTGCTAGTGCGACGGAAGGAGAGGG
AGAGGGAGGAGGGGGAAGGACGGTGAGGATAGGAAGAGGAGATGAGATAG
AGTAAAGTGCAAAAGTGTAGTGTATATTGTGCGAGGGTGTCAATTTTCCA
GTGAGTTTATAAATAAGTGTGTTGGACCTTTGTCGATGTCGTTGGCGTGG
TGATGGATGGCGATGGATGAGAAGCAAATTGATTCGCTGAATAGCAGTAG
CAGTAGGAAACAAGCAAAAACACAATTTAAAGAGAAGGTCGGGTTATCGT
TTTGGAAGCCGAAATTCAAGATAGATTAGATAAATGAGGAATCAGACAAG
GAACTC back to topprotein sequence of jgi.p|Nanoce1779_2|590237 >mRNA_5763-protein ID=mRNA_5763-protein|Name=jgi.p|Nanoce1779_2|590237|organism=Nannochloropsis oceanica|type=polypeptide|length=255bp
MKTLLVLVLLGMLFEVESYRLLPAIRKRWRRRRPPPTVVLPQLDSFKLIP
SQKTVQAQGWRDTLVSIGNELHRSSSLPTKAQKETIRSIALALETVQPTP
TKAPALSPFNQGRWALLYTDAPGISSGRIGPFGLIKGRVFQEVDLTTRGY
VNILEVSKPGQAPWLEAKLTAEFQVVDDTDWEVTFKDVVGMLRGKQVVKQ
VFSGVSRVWTHTYLDREGGVRIMRARRPEKRPEDAFLFVLVRRKEREREE
GEGR* back to topmRNA from alignment at scaffold_11:523993..525485- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5763 ID=mRNA_5763|Name=jgi.p|Nanoce1779_2|590237|organism=Nannochloropsis oceanica|type=mRNA|length=1493bp|location=Sequence derived from alignment at scaffold_11:523993..525485- (Nannochloropsis oceanica)
ACAGCTACGACATGAAAACCCTTCTCGTCCTGGTCCTGCTGGGGATGCTA
TTTGAGGTGGAGTCGTATCGGTAAGATATGCTGACCTCCCCACCCCAACC
CCACCTCCGCTTCCTCTTGAGGAGGTCACTAGCACTGTTTGTCCTTTTAG
GCGCCCTTCCTTTGTGCTTTGACGGTATACATATGCCTGTGCTAGTTTCG
TCCTCCTATTTCATCTCTCATCTGTTACGATAGGCCTTCCAACTGTGCGT
AACAAGGAAATACAGGCTCCTCTTCACCTTCCCTCCCCACCTTTCTTTCC
ATGCGCCGGACCGCCGCACTACATTACATTTGTATACCTTTTCTCCTCAT
TGCTGCACTATCGTTCTAGATCTGATAGAATTCTCTTCGCAATTCCGAAA
CAGGATACCGTTCCCTTCTGACTTTCCTCCTTTCACTCCAACAGTCTCGT
CGCAATTTCGAGACAGAACATCGTTCCCTTCTGATATTCCTTCCTACACT
TCCACAGTCTCCTCCCTGCGATCCGCAAGCGCTGGCGCCGCCGCCGGCCA
CCCCCCACCGTGGTCCTGCCTCAGCTTGATTCCTTTAAACTCATTCCCAG
TCAAAAAACTGTGCAAGCACAAGGCTGGCGCGACACCTTAGTGAGCATCG
GCAACGAGCTACATCGTTCAAGCAGCCTCCCGACCAAGGCCCAAAAAGAG
ACGATTCGAAGTATTGCCTTGGCGCTCGAAACCGTTCAACCCACCCCTAC
AAAAGCACCGGCATTATCTCCTTTTAATCAGGGGCGATGGGCCTTGCTCT
ACACAGACGCACCGGGGATAAGCTCAGGGCGGATAGGTCCGTTCGGATTG
ATCAAAGGAAGAGTGTTCCAAGAAGTGGATTTGACAACGCGGGGGTATGT
GAATATATTGGAGGTAAGCAAGCCGGGACAGGCCCCTTGGTTGGAAGCGA
AGCTGACCGCGGAGTTTCAGGTAGTTGATGATACGGATTGGGAAGTGACG
TTTAAGGACGTTGTCGGGATGTTGCGGGGAAAGCAAGTAGTGAAGCAGGT
GTTCAGCGGGGTGAGTCGGGTCTGGACGCATACTTATTTGGATAGGGAGG
GAGGGGTAAGGATTATGAGAGCACGGAGACCGGAGAAGAGGCCGGAGGAC
GCGTTTTTGTTTGTGCTAGTGCGACGGAAGGAGAGGGAGAGGGAGGAGGG
GGAAGGACGGTGAGGATAGGAAGAGGAGATGAGATAGAGTAAAGTGCAAA
AGTGTAGTGTATATTGTGCGAGGGTGTCAATTTTCCAGTGAGTTTATAAA
TAAGTGTGTTGGACCTTTGTCGATGTCGTTGGCGTGGTGATGGATGGCGA
TGGATGAGAAGCAAATTGATTCGCTGAATAGCAGTAGCAGTAGGAAACAA
GCAAAAACACAATTTAAAGAGAAGGTCGGGTTATCGTTTTGGAAGCCGAA
ATTCAAGATAGATTAGATAAATGAGGAATCAGACAAGGAACTC back to topCoding sequence (CDS) from alignment at scaffold_11:523993..525485- >mRNA_5763 ID=mRNA_5763|Name=jgi.p|Nanoce1779_2|590237|organism=Nannochloropsis oceanica|type=CDS|length=1530bp|location=Sequence derived from alignment at scaffold_11:523993..525485- (Nannochloropsis oceanica)
TCTCCTCCCTGCGATCCGCAAGCGCTGGCGCCGCCGCCGGCCACCCCCCA
CCGTGGTCCTGCCTCAGCTTGATTCCTTTAAACTCATTCCCAGTCAAAAA
ACTGTGCAAGCACAAGGCTGGCGCGACACCTTAGTGAGCATCGGCAACGA
GCTACATCGTTCAAGCAGCCTCCCGACCAAGGCCCAAAAAGAGACGATTC
GAAGTATTGCCTTGGCGCTCGAAACCGTTCAACCCACCCCTACAAAAGCA
CCGGCATTATCTCCTTTTAATCAGGGGCGATGGGCCTTGCTCTACACAGA
CGCACCGGGGATAAGCTCAGGGCGGATAGGTCCGTTCGGATTGATCAAAG
GAAGAGTGTTCCAAGAAGTGGATTTGACAACGCGGGGGTATGTGAATATA
TTGGAGGTAAGCAAGCCGGGACAGGCCCCTTGGTTGGAAGCGAAGCTGAC
CGCGGAGTTTCAGGTAGTTGATGATACGGATTGGGAAGTGACGTTTAAGG
ACGTTGTCGGGATGTTGCGGGGAAAGCAAGTAGTGAAGCAGGTGTTCAGC
GGGGTGAGTCGGGTCTGGACGCATACTTATTTGGATAGGGAGGGAGGGGT
AAGGATTATGAGAGCACGGAGACCGGAGAAGAGGCCGGAGGACGCGTTTT
TGTTTGTGCTAGTGCGACGGAAGGAGAGGGAGAGGGAGGAGGGGGAAGGA
CGGTGAATGAAAACCCTTCTCGTCCTGGTCCTGCTGGGGATGCTATTTGA
GGTGGAGTCGTATCGTCTCCTCCCTGCGATCCGCAAGCGCTGGCGCCGCC
GCCGGCCACCCCCCACCGTGGTCCTGCCTCAGCTTGATTCCTTTAAACTC
ATTCCCAGTCAAAAAACTGTGCAAGCACAAGGCTGGCGCGACACCTTAGT
GAGCATCGGCAACGAGCTACATCGTTCAAGCAGCCTCCCGACCAAGGCCC
AAAAAGAGACGATTCGAAGTATTGCCTTGGCGCTCGAAACCGTTCAACCC
ACCCCTACAAAAGCACCGGCATTATCTCCTTTTAATCAGGGGCGATGGGC
CTTGCTCTACACAGACGCACCGGGGATAAGCTCAGGGCGGATAGGTCCGT
TCGGATTGATCAAAGGAAGAGTGTTCCAAGAAGTGGATTTGACAACGCGG
GGGTATGTGAATATATTGGAGGTAAGCAAGCCGGGACAGGCCCCTTGGTT
GGAAGCGAAGCTGACCGCGGAGTTTCAGGTAGTTGATGATACGGATTGGG
AAGTGACGTTTAAGGACGTTGTCGGGATGTTGCGGGGAAAGCAAGTAGTG
AAGCAGGTGTTCAGCGGGGTGAGTCGGGTCTGGACGCATACTTATTTGGA
TAGGGAGGGAGGGGTAAGGATTATGAGAGCACGGAGACCGGAGAAGAGGC
CGGAGGACGCGTTTTTGTTTGTGCTAGTGCGACGGAAGGAGAGGGAGAGG
GAGGAGGGGGAAGGACGGTGAATGAAAACCCTTCTCGTCCTGGTCCTGCT
GGGGATGCTATTTGAGGTGGAGTCGTATCG back to top
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