jgi.p|Nanoce1779_2|670998, mRNA_5725 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|670998
Unique Name	mRNA_5725
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4360
Alignment location	scaffold_11:423733..428092 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	671084
Track	FilteredModels2
ProteinId	670998

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_11	supercontig	scaffold_11:423733..428092 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|670998	gene_5725	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|670998	mRNA_5725-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_5725	CDS_5725	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_11:423733..428092+
coding sequence from alignment at scaffold_11:423733..428092+

mRNA sequence

>mRNA_5725 ID=mRNA_5725|Name=jgi.p|Nanoce1779_2|670998|organism=Nannochloropsis oceanica|type=mRNA|length=4360bp
ACAGGCATACCACCGTCCAGCTCCCTTATCCTTCGCCACGGACAGAACGA
CATTAAGCGGACCACTCCGTGCCTCCCCCTTGGTCGGTCGCCGCGCAAAG
GGAGCACCACAACCACTAACGCACACACGAGATACTGCGCAAAGCACGAC
GGCCCTCAACCCTGCCACACTCTCCTTTCTTCTTCAGTAGCGGCACACAT
AAGCAGACCGACAGCATTATAGACGCCCCAGGCAGCAAGGCAAGTAGGGC
GTATCCATCCGACGAGTAGAGACGAGTGTATTTAGAGGCCGTTTTGACGG
GGAACTGAAACAAGGGCGCACGGGAGGGGTCAAGCAAGGCTTCCTTCCGA
GGCCAAGTAGTACAGGAGAAACGACAACGTCAAGCATCGTCGCAGTCAAG
CGCAGTACGAGCACAACTATCTGGAGTAGTGCTCAGGAGACGACTTTACG
AGGCTGTGACGGCCGTATTATCCCGGACCTGGACGCCCCCACGCACCAGA
TGAGCAGCAAGAGCGGCACCGCCGCAGGTCCGCGGCCGGCCGATGTCAAT
GTCAGCGGGAATACTAGCGATGAAATAAAGCCTCCTGCTTCCAATTCTAC
CTCAGCACCTTCCTCTATGCCTGGGGATTTGCCCAAAAAAATGCTGAGCG
CGGCGGCCCAGGCCTACAAACCCATGAAACTGCGGCCGGACGCTCACGTC
TTCATTCCCGGTGCCACCTTCAAGCCACCCACTCCCGCAGCCGGAGGCTG
TAGTGGACCTCCATTGAATTCACGGGCTACCTCGACTGTTGCAACCGCTG
GCCTCAAGCCTCTTATGGTGGCACGCAGTGGCCCCTTTCCCGGGGCCCCC
ATATACACAAAGCATCAGCAAGCCTACCTCCAACACCCGCTCCCTGGACC
GCCGCAACACCATGTCAAGGACGCTGGGGTCAAAGCGGGCGCACTTCACG
TAGGACCAGAGACTGGCCACCCCCACTCTCATCATCTGTACCAGCCACCT
CAGCAGCAGGGCGTCAAACCTCACCCGCCGTCGCAACACAAGCAGCAGCA
GCCAGCTCCGACGCATACCAAGCAGGGGAAAGGGACACCACAGGTGCTGT
CACCCCAGACAGAGAGCATGTCAATAATTTCTGCCAGGAATGGCATTCCG
GCCACGGCTTTGAGTACAGCCTCGGCAGCCACGAGCGCGGGGACTACCGC
TGCGCCTATGCCTGCGCCTGCTTCGTCGACCCCTCGCTCTAACGGGGAGA
CCACCAAAATTAACCCATCCAATTCCCCGGCCTTGGTCCACCCCCAGCCA
ACCAAGGAGGTACCAGTCGGGCTAGAGCGCGAAAACAGCGGCGTATTTTC
CTCATCCCTGTGGAGAAGAAGCGGCGCGGACAAGCCCAGCACCCCCACTA
GCTCGGGCAGTAGTCCCTTTGGGGGCAGCGCGGCCGTGGTGGCGGCGCCC
TTGGCAGTGAAGTCCTACCGCGCCAGCAGCCACGAGGATTGGGAGCGCGA
GCTGCAGCCGGCCATCCCCGATGCGCCGGCCGTAAAGGGCATGCAGCAAT
ACTACGCTCGCGACCTCCTGCGCATTCGCCGAGTCGTCGTCGAAGCGTCC
ACCCTTGGTTCACTGCCCACCAAGCCAGAGGGCAGCGATATCCCCGCCGA
GATCCTCAATACCGAGCCTCCGGGCGCCTCACCCATCGCTCCTGCCGCTG
ATGTACCCAGCCTGTCGTTGGAAGCCCCGCAGCCACAGCGTGCGCGTACG
CCGAAGGTGCCTGAGGGCCTGCCGAGGCCACGCAGCACCACGGGTTTCGA
CGGCCCGGGTGGAGGTGGGGGAGGGGGTGGCAACAGTGGTCGCAGTACCC
CACGGGGTGATTTGGAGCCCCCGGTGTTCGGCCGGCAGAGCAGTCGGGAC
AGGCGTGGAGGCGGTAAGGCGGGTGGGGGAGGGCGAGGGGGGGGCGGGGG
CGGGGGCAGCTACCGCAAGGCGTCACCCCCACTGGAGGAAGACGGGTACG
GGCCGAAGCGCATCGAGGAGGAGCGGCGATGGCGACCTGAGTCAATCATG
CTACGGCGGGCAGGAGGTATGGATCCGGAGGACCCGGAGAAGAAGATCAA
GCGGGCGCGGGCGCTGCTGAACAAGCTTTCCATGGAGAAGTTCGATAAAC
TGAGCGCTGAGTTTGTAAACGTGGGCTTCACCTCAGACGCTCTGCTTTGG
CGCGCTATAGACATTATCGTGGCCAAAGCGCAGGAGGAGGTTCACTTCTC
ATCCATGTATGCAGAACTCTGCCTGCGCCTGTCCCGTACGCCCCTGGAAG
GCTTGGGCGAGACCGACAAGGGTAAGCTTTTTCGCAAGATCTTGCTGCAC
CGCTGCCAGGAGGAATTCTACGAGGATCTGCCGACGCGCATGGCCAAGGT
GGATACAGAGCCCGAAACGGCAGGACTGGGACCGGAGGAACGCGCGGAGA
AAAAGCGTATGTCTAAGTTCCGGTACCTGGGCCACATGCGCTTCATCGGC
GAGCTGTTTCTGAAGGAGCTCTTAAAGGAAGAGCACGTGCACGACTGCAT
CAAGGAGCTGTTTGGCGAGGAGGACAACCCAGACGAGGAGAAGCTAGCCT
GCCTGTGCAAGCTGCTCAGTACCACGGGCAAGAAACTGGAGCTGCTGGCC
GAGGTGAACGCTGAGACGTCCAAGAAGCAGCGGCGACTGCTGAATAAGTA
CTTTGAGGAGGTAAAGACGCTCTCGGAGGCGACTGGCCTGCTCAATCAGC
GTACTCGCTGTCTTCTTAAGGATCTGTACGAGCTGCGCCAGAATGGCTAC
GTTCCGCGCCGCGCCATTGAGACAGCAAAGACGCTCTCCCAGGTACACGA
GGAGGCGGCGCGCGAGGCGCTGGCGAAAGGGGGTTCGACGTCTGGCTCCA
AGGGTGTGGGTGGGGGGAAAGTGGCAAACAGTGGCGGAGGGGGAAGCCGC
GGAGGCGGGGGAGGGAGCACGCAGGACGTGCGCAAAGAGCGTGCGTTGGG
CGAGGCCAGTCGGCAGTCGTCGTCTGCATCCTTGGCTTCGACGTCGGCTC
CAGACGAGGACGGATGGGAGACTGTGGGTTCCAAAAAGGCCATCAGCAAG
TCGACCAGTAAACAAAGCCTGGGTCGGTCCGCCTCCAACAACAGCCTGAG
CGGCGGGAGTGGGGCCATGAAAAAGACGGGCAGCAACGCCAGTTTCGGGG
CCTTCTCGGTACTGCAGGAGGAGAAACGGAAGAAGAAGGAACATAAGGAC
AAGAAAGAAAAGGAACACAGAAAGGAGAAGAAGGCGACCAGCGCGGGAAC
AGCACCCCAAAAGCGGGAGGCCAATAACGTGGACCTGCAGAAGGCCGAGG
AACAGGAGGGAGAGGAGGAAGAGCAAGAAGAACTGAGTTCATGCCCGTCC
CCGACAGTTGGTGAGACGTCTAGCATAGCTTCTTCCAAAGTCGCGCAGCC
TCTGAGCGAAGTGGAATTCAAGCGCAAGGGCAAGGCTATCTTGGCAGACT
ACCTGGAGATGCAGGACGAGAGGGACGCAGTCGAGTCTATGGGTAACATG
AAACTAGAGGACCCGGAGATAATAGGCAAGCTCGTAGGCATCTGGGTGGA
CGACATCCTTGCTCGCAGCGCGTGCAAGGAGGAACATCGCATCCACCTCG
CGGATTTGATGGTGATTCTACACAAGGCTGATCTTCTGCCCACACCTGCA
GCAGCTCAAGGCCTGAACAGCGCCTTGGAGTTCTTGGCGGACATAAAGGT
GGACATTCCCAAGGTGGAAGACTGGATGGCCAAGATCATCTGCCGGCTTC
TGGAGGGGGGTGTCCTGTCCCTTGCTTTCTTACAGGCCCTACCCCAGCAA
ATGGTCCAGGACGGGGCAGCGGTGCCTTTCGCCCTCGCAGTGATGAGGGA
GGTCAAAGCGAGCATGGGGAATGCGAAAGCCAAGGAGATGTTGGAGGTGG
AAAAGCTAAATTTAGGTCTATTGGTAGGCCCCGATGGGGACGCAGCGGAG
GCGCAGCGTTTGGTCCATACCTGGTCTTTCTAAGGGAAATAGAAGGATAT
GCATGAGAGTAAGTAAGACAAGAGGGAGCGAGTGACGAGGAGGGCTGCGT
GATCGCCGCTCTTGTAGTCATTTTGCATTTATAACTAACACAAGACATCA
GCCACTAGACAAAGGATGGAAGATACAATACAATGGAAAGCAAGTAGTCA
AAAGTCGTGCATCATTCCCGAAAAACACACGAAGGAGAGGTGATGGAAGC
GTCACCCACACCAAGGAAGTGGCTGTTTTGTGCGGGTGCGGCGTGGTTGT
CTTGACGAAGGATCAATGAGAAGAAATTAGAGAACGATAAGAAGAGAATC
AACGACTGTG

protein sequence of jgi.p|Nanoce1779_2|670998

>mRNA_5725-protein ID=mRNA_5725-protein|Name=jgi.p|Nanoce1779_2|670998|organism=Nannochloropsis oceanica|type=polypeptide|length=1178bp
MSSKSGTAAGPRPADVNVSGNTSDEIKPPASNSTSAPSSMPGDLPKKMLS
AAAQAYKPMKLRPDAHVFIPGATFKPPTPAAGGCSGPPLNSRATSTVATA
GLKPLMVARSGPFPGAPIYTKHQQAYLQHPLPGPPQHHVKDAGVKAGALH
VGPETGHPHSHHLYQPPQQQGVKPHPPSQHKQQQPAPTHTKQGKGTPQVL
SPQTESMSIISARNGIPATALSTASAATSAGTTAAPMPAPASSTPRSNGE
TTKINPSNSPALVHPQPTKEVPVGLERENSGVFSSSLWRRSGADKPSTPT
SSGSSPFGGSAAVVAAPLAVKSYRASSHEDWERELQPAIPDAPAVKGMQQ
YYARDLLRIRRVVVEASTLGSLPTKPEGSDIPAEILNTEPPGASPIAPAA
DVPSLSLEAPQPQRARTPKVPEGLPRPRSTTGFDGPGGGGGGGGNSGRST
PRGDLEPPVFGRQSSRDRRGGGKAGGGGRGGGGGGGSYRKASPPLEEDGY
GPKRIEEERRWRPESIMLRRAGGMDPEDPEKKIKRARALLNKLSMEKFDK
LSAEFVNVGFTSDALLWRAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLE
GLGETDKGKLFRKILLHRCQEEFYEDLPTRMAKVDTEPETAGLGPEERAE
KKRMSKFRYLGHMRFIGELFLKELLKEEHVHDCIKELFGEEDNPDEEKLA
CLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVKTLSEATGLLNQ
RTRCLLKDLYELRQNGYVPRRAIETAKTLSQVHEEAAREALAKGGSTSGS
KGVGGGKVANSGGGGSRGGGGGSTQDVRKERALGEASRQSSSASLASTSA
PDEDGWETVGSKKAISKSTSKQSLGRSASNNSLSGGSGAMKKTGSNASFG
AFSVLQEEKRKKKEHKDKKEKEHRKEKKATSAGTAPQKREANNVDLQKAE
EQEGEEEEQEELSSCPSPTVGETSSIASSKVAQPLSEVEFKRKGKAILAD
YLEMQDERDAVESMGNMKLEDPEIIGKLVGIWVDDILARSACKEEHRIHL
ADLMVILHKADLLPTPAAAQGLNSALEFLADIKVDIPKVEDWMAKIICRL
LEGGVLSLAFLQALPQQMVQDGAAVPFALAVMREVKASMGNAKAKEMLEV
EKLNLGLLVGPDGDAAEAQRLVHTWSF*

mRNA from alignment at scaffold_11:423733..428092+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5725 ID=mRNA_5725|Name=jgi.p|Nanoce1779_2|670998|organism=Nannochloropsis oceanica|type=mRNA|length=4360bp|location=Sequence derived from alignment at scaffold_11:423733..428092+ (Nannochloropsis oceanica)
ACAGGCATACCACCGTCCAGCTCCCTTATCCTTCGCCACGGACAGAACGA
CATTAAGCGGACCACTCCGTGCCTCCCCCTTGGTCGGTCGCCGCGCAAAG
GGAGCACCACAACCACTAACGCACACACGAGATACTGCGCAAAGCACGAC
GGCCCTCAACCCTGCCACACTCTCCTTTCTTCTTCAGTAGCGGCACACAT
AAGCAGACCGACAGCATTATAGACGCCCCAGGCAGCAAGGCAAGTAGGGC
GTATCCATCCGACGAGTAGAGACGAGTGTATTTAGAGGCCGTTTTGACGG
GGAACTGAAACAAGGGCGCACGGGAGGGGTCAAGCAAGGCTTCCTTCCGA
GGCCAAGTAGTACAGGAGAAACGACAACGTCAAGCATCGTCGCAGTCAAG
CGCAGTACGAGCACAACTATCTGGAGTAGTGCTCAGGAGACGACTTTACG
AGGCTGTGACGGCCGTATTATCCCGGACCTGGACGCCCCCACGCACCAGA
TGAGCAGCAAGAGCGGCACCGCCGCAGGTCCGCGGCCGGCCGATGTCAAT
GTCAGCGGGAATACTAGCGATGAAATAAAGCCTCCTGCTTCCAATTCTAC
CTCAGCACCTTCCTCTATGCCTGGGGATTTGCCCAAAAAAATGCTGAGCG
CGGCGGCCCAGGCCTACAAACCCATGAAACTGCGGCCGGACGCTCACGTC
TTCATTCCCGGTGCCACCTTCAAGCCACCCACTCCCGCAGCCGGAGGCTG
TAGTGGACCTCCATTGAATTCACGGGCTACCTCGACTGTTGCAACCGCTG
GCCTCAAGCCTCTTATGGTGGCACGCAGTGGCCCCTTTCCCGGGGCCCCC
ATATACACAAAGCATCAGCAAGCCTACCTCCAACACCCGCTCCCTGGACC
GCCGCAACACCATGTCAAGGACGCTGGGGTCAAAGCGGGCGCACTTCACG
TAGGACCAGAGACTGGCCACCCCCACTCTCATCATCTGTACCAGCCACCT
CAGCAGCAGGGCGTCAAACCTCACCCGCCGTCGCAACACAAGCAGCAGCA
GCCAGCTCCGACGCATACCAAGCAGGGGAAAGGGACACCACAGGTGCTGT
CACCCCAGACAGAGAGCATGTCAATAATTTCTGCCAGGAATGGCATTCCG
GCCACGGCTTTGAGTACAGCCTCGGCAGCCACGAGCGCGGGGACTACCGC
TGCGCCTATGCCTGCGCCTGCTTCGTCGACCCCTCGCTCTAACGGGGAGA
CCACCAAAATTAACCCATCCAATTCCCCGGCCTTGGTCCACCCCCAGCCA
ACCAAGGAGGTACCAGTCGGGCTAGAGCGCGAAAACAGCGGCGTATTTTC
CTCATCCCTGTGGAGAAGAAGCGGCGCGGACAAGCCCAGCACCCCCACTA
GCTCGGGCAGTAGTCCCTTTGGGGGCAGCGCGGCCGTGGTGGCGGCGCCC
TTGGCAGTGAAGTCCTACCGCGCCAGCAGCCACGAGGATTGGGAGCGCGA
GCTGCAGCCGGCCATCCCCGATGCGCCGGCCGTAAAGGGCATGCAGCAAT
ACTACGCTCGCGACCTCCTGCGCATTCGCCGAGTCGTCGTCGAAGCGTCC
ACCCTTGGTTCACTGCCCACCAAGCCAGAGGGCAGCGATATCCCCGCCGA
GATCCTCAATACCGAGCCTCCGGGCGCCTCACCCATCGCTCCTGCCGCTG
ATGTACCCAGCCTGTCGTTGGAAGCCCCGCAGCCACAGCGTGCGCGTACG
CCGAAGGTGCCTGAGGGCCTGCCGAGGCCACGCAGCACCACGGGTTTCGA
CGGCCCGGGTGGAGGTGGGGGAGGGGGTGGCAACAGTGGTCGCAGTACCC
CACGGGGTGATTTGGAGCCCCCGGTGTTCGGCCGGCAGAGCAGTCGGGAC
AGGCGTGGAGGCGGTAAGGCGGGTGGGGGAGGGCGAGGGGGGGGCGGGGG
CGGGGGCAGCTACCGCAAGGCGTCACCCCCACTGGAGGAAGACGGGTACG
GGCCGAAGCGCATCGAGGAGGAGCGGCGATGGCGACCTGAGTCAATCATG
CTACGGCGGGCAGGAGGTATGGATCCGGAGGACCCGGAGAAGAAGATCAA
GCGGGCGCGGGCGCTGCTGAACAAGCTTTCCATGGAGAAGTTCGATAAAC
TGAGCGCTGAGTTTGTAAACGTGGGCTTCACCTCAGACGCTCTGCTTTGG
CGCGCTATAGACATTATCGTGGCCAAAGCGCAGGAGGAGGTTCACTTCTC
ATCCATGTATGCAGAACTCTGCCTGCGCCTGTCCCGTACGCCCCTGGAAG
GCTTGGGCGAGACCGACAAGGGTAAGCTTTTTCGCAAGATCTTGCTGCAC
CGCTGCCAGGAGGAATTCTACGAGGATCTGCCGACGCGCATGGCCAAGGT
GGATACAGAGCCCGAAACGGCAGGACTGGGACCGGAGGAACGCGCGGAGA
AAAAGCGTATGTCTAAGTTCCGGTACCTGGGCCACATGCGCTTCATCGGC
GAGCTGTTTCTGAAGGAGCTCTTAAAGGAAGAGCACGTGCACGACTGCAT
CAAGGAGCTGTTTGGCGAGGAGGACAACCCAGACGAGGAGAAGCTAGCCT
GCCTGTGCAAGCTGCTCAGTACCACGGGCAAGAAACTGGAGCTGCTGGCC
GAGGTGAACGCTGAGACGTCCAAGAAGCAGCGGCGACTGCTGAATAAGTA
CTTTGAGGAGGTAAAGACGCTCTCGGAGGCGACTGGCCTGCTCAATCAGC
GTACTCGCTGTCTTCTTAAGGATCTGTACGAGCTGCGCCAGAATGGCTAC
GTTCCGCGCCGCGCCATTGAGACAGCAAAGACGCTCTCCCAGGTACACGA
GGAGGCGGCGCGCGAGGCGCTGGCGAAAGGGGGTTCGACGTCTGGCTCCA
AGGGTGTGGGTGGGGGGAAAGTGGCAAACAGTGGCGGAGGGGGAAGCCGC
GGAGGCGGGGGAGGGAGCACGCAGGACGTGCGCAAAGAGCGTGCGTTGGG
CGAGGCCAGTCGGCAGTCGTCGTCTGCATCCTTGGCTTCGACGTCGGCTC
CAGACGAGGACGGATGGGAGACTGTGGGTTCCAAAAAGGCCATCAGCAAG
TCGACCAGTAAACAAAGCCTGGGTCGGTCCGCCTCCAACAACAGCCTGAG
CGGCGGGAGTGGGGCCATGAAAAAGACGGGCAGCAACGCCAGTTTCGGGG
CCTTCTCGGTACTGCAGGAGGAGAAACGGAAGAAGAAGGAACATAAGGAC
AAGAAAGAAAAGGAACACAGAAAGGAGAAGAAGGCGACCAGCGCGGGAAC
AGCACCCCAAAAGCGGGAGGCCAATAACGTGGACCTGCAGAAGGCCGAGG
AACAGGAGGGAGAGGAGGAAGAGCAAGAAGAACTGAGTTCATGCCCGTCC
CCGACAGTTGGTGAGACGTCTAGCATAGCTTCTTCCAAAGTCGCGCAGCC
TCTGAGCGAAGTGGAATTCAAGCGCAAGGGCAAGGCTATCTTGGCAGACT
ACCTGGAGATGCAGGACGAGAGGGACGCAGTCGAGTCTATGGGTAACATG
AAACTAGAGGACCCGGAGATAATAGGCAAGCTCGTAGGCATCTGGGTGGA
CGACATCCTTGCTCGCAGCGCGTGCAAGGAGGAACATCGCATCCACCTCG
CGGATTTGATGGTGATTCTACACAAGGCTGATCTTCTGCCCACACCTGCA
GCAGCTCAAGGCCTGAACAGCGCCTTGGAGTTCTTGGCGGACATAAAGGT
GGACATTCCCAAGGTGGAAGACTGGATGGCCAAGATCATCTGCCGGCTTC
TGGAGGGGGGTGTCCTGTCCCTTGCTTTCTTACAGGCCCTACCCCAGCAA
ATGGTCCAGGACGGGGCAGCGGTGCCTTTCGCCCTCGCAGTGATGAGGGA
GGTCAAAGCGAGCATGGGGAATGCGAAAGCCAAGGAGATGTTGGAGGTGG
AAAAGCTAAATTTAGGTCTATTGGTAGGCCCCGATGGGGACGCAGCGGAG
GCGCAGCGTTTGGTCCATACCTGGTCTTTCTAAGGGAAATAGAAGGATAT
GCATGAGAGTAAGTAAGACAAGAGGGAGCGAGTGACGAGGAGGGCTGCGT
GATCGCCGCTCTTGTAGTCATTTTGCATTTATAACTAACACAAGACATCA
GCCACTAGACAAAGGATGGAAGATACAATACAATGGAAAGCAAGTAGTCA
AAAGTCGTGCATCATTCCCGAAAAACACACGAAGGAGAGGTGATGGAAGC
GTCACCCACACCAAGGAAGTGGCTGTTTTGTGCGGGTGCGGCGTGGTTGT
CTTGACGAAGGATCAATGAGAAGAAATTAGAGAACGATAAGAAGAGAATC
AACGACTGTG

Coding sequence (CDS) from alignment at scaffold_11:423733..428092+

>mRNA_5725 ID=mRNA_5725|Name=jgi.p|Nanoce1779_2|670998|organism=Nannochloropsis oceanica|type=CDS|length=3534bp|location=Sequence derived from alignment at scaffold_11:423733..428092+ (Nannochloropsis oceanica)
ATGAGCAGCAAGAGCGGCACCGCCGCAGGTCCGCGGCCGGCCGATGTCAA
TGTCAGCGGGAATACTAGCGATGAAATAAAGCCTCCTGCTTCCAATTCTA
CCTCAGCACCTTCCTCTATGCCTGGGGATTTGCCCAAAAAAATGCTGAGC
GCGGCGGCCCAGGCCTACAAACCCATGAAACTGCGGCCGGACGCTCACGT
CTTCATTCCCGGTGCCACCTTCAAGCCACCCACTCCCGCAGCCGGAGGCT
GTAGTGGACCTCCATTGAATTCACGGGCTACCTCGACTGTTGCAACCGCT
GGCCTCAAGCCTCTTATGGTGGCACGCAGTGGCCCCTTTCCCGGGGCCCC
CATATACACAAAGCATCAGCAAGCCTACCTCCAACACCCGCTCCCTGGAC
CGCCGCAACACCATGTCAAGGACGCTGGGGTCAAAGCGGGCGCACTTCAC
GTAGGACCAGAGACTGGCCACCCCCACTCTCATCATCTGTACCAGCCACC
TCAGCAGCAGGGCGTCAAACCTCACCCGCCGTCGCAACACAAGCAGCAGC
AGCCAGCTCCGACGCATACCAAGCAGGGGAAAGGGACACCACAGGTGCTG
TCACCCCAGACAGAGAGCATGTCAATAATTTCTGCCAGGAATGGCATTCC
GGCCACGGCTTTGAGTACAGCCTCGGCAGCCACGAGCGCGGGGACTACCG
CTGCGCCTATGCCTGCGCCTGCTTCGTCGACCCCTCGCTCTAACGGGGAG
ACCACCAAAATTAACCCATCCAATTCCCCGGCCTTGGTCCACCCCCAGCC
AACCAAGGAGGTACCAGTCGGGCTAGAGCGCGAAAACAGCGGCGTATTTT
CCTCATCCCTGTGGAGAAGAAGCGGCGCGGACAAGCCCAGCACCCCCACT
AGCTCGGGCAGTAGTCCCTTTGGGGGCAGCGCGGCCGTGGTGGCGGCGCC
CTTGGCAGTGAAGTCCTACCGCGCCAGCAGCCACGAGGATTGGGAGCGCG
AGCTGCAGCCGGCCATCCCCGATGCGCCGGCCGTAAAGGGCATGCAGCAA
TACTACGCTCGCGACCTCCTGCGCATTCGCCGAGTCGTCGTCGAAGCGTC
CACCCTTGGTTCACTGCCCACCAAGCCAGAGGGCAGCGATATCCCCGCCG
AGATCCTCAATACCGAGCCTCCGGGCGCCTCACCCATCGCTCCTGCCGCT
GATGTACCCAGCCTGTCGTTGGAAGCCCCGCAGCCACAGCGTGCGCGTAC
GCCGAAGGTGCCTGAGGGCCTGCCGAGGCCACGCAGCACCACGGGTTTCG
ACGGCCCGGGTGGAGGTGGGGGAGGGGGTGGCAACAGTGGTCGCAGTACC
CCACGGGGTGATTTGGAGCCCCCGGTGTTCGGCCGGCAGAGCAGTCGGGA
CAGGCGTGGAGGCGGTAAGGCGGGTGGGGGAGGGCGAGGGGGGGGCGGGG
GCGGGGGCAGCTACCGCAAGGCGTCACCCCCACTGGAGGAAGACGGGTAC
GGGCCGAAGCGCATCGAGGAGGAGCGGCGATGGCGACCTGAGTCAATCAT
GCTACGGCGGGCAGGAGGTATGGATCCGGAGGACCCGGAGAAGAAGATCA
AGCGGGCGCGGGCGCTGCTGAACAAGCTTTCCATGGAGAAGTTCGATAAA
CTGAGCGCTGAGTTTGTAAACGTGGGCTTCACCTCAGACGCTCTGCTTTG
GCGCGCTATAGACATTATCGTGGCCAAAGCGCAGGAGGAGGTTCACTTCT
CATCCATGTATGCAGAACTCTGCCTGCGCCTGTCCCGTACGCCCCTGGAA
GGCTTGGGCGAGACCGACAAGGGTAAGCTTTTTCGCAAGATCTTGCTGCA
CCGCTGCCAGGAGGAATTCTACGAGGATCTGCCGACGCGCATGGCCAAGG
TGGATACAGAGCCCGAAACGGCAGGACTGGGACCGGAGGAACGCGCGGAG
AAAAAGCGTATGTCTAAGTTCCGGTACCTGGGCCACATGCGCTTCATCGG
CGAGCTGTTTCTGAAGGAGCTCTTAAAGGAAGAGCACGTGCACGACTGCA
TCAAGGAGCTGTTTGGCGAGGAGGACAACCCAGACGAGGAGAAGCTAGCC
TGCCTGTGCAAGCTGCTCAGTACCACGGGCAAGAAACTGGAGCTGCTGGC
CGAGGTGAACGCTGAGACGTCCAAGAAGCAGCGGCGACTGCTGAATAAGT
ACTTTGAGGAGGTAAAGACGCTCTCGGAGGCGACTGGCCTGCTCAATCAG
CGTACTCGCTGTCTTCTTAAGGATCTGTACGAGCTGCGCCAGAATGGCTA
CGTTCCGCGCCGCGCCATTGAGACAGCAAAGACGCTCTCCCAGGTACACG
AGGAGGCGGCGCGCGAGGCGCTGGCGAAAGGGGGTTCGACGTCTGGCTCC
AAGGGTGTGGGTGGGGGGAAAGTGGCAAACAGTGGCGGAGGGGGAAGCCG
CGGAGGCGGGGGAGGGAGCACGCAGGACGTGCGCAAAGAGCGTGCGTTGG
GCGAGGCCAGTCGGCAGTCGTCGTCTGCATCCTTGGCTTCGACGTCGGCT
CCAGACGAGGACGGATGGGAGACTGTGGGTTCCAAAAAGGCCATCAGCAA
GTCGACCAGTAAACAAAGCCTGGGTCGGTCCGCCTCCAACAACAGCCTGA
GCGGCGGGAGTGGGGCCATGAAAAAGACGGGCAGCAACGCCAGTTTCGGG
GCCTTCTCGGTACTGCAGGAGGAGAAACGGAAGAAGAAGGAACATAAGGA
CAAGAAAGAAAAGGAACACAGAAAGGAGAAGAAGGCGACCAGCGCGGGAA
CAGCACCCCAAAAGCGGGAGGCCAATAACGTGGACCTGCAGAAGGCCGAG
GAACAGGAGGGAGAGGAGGAAGAGCAAGAAGAACTGAGTTCATGCCCGTC
CCCGACAGTTGGTGAGACGTCTAGCATAGCTTCTTCCAAAGTCGCGCAGC
CTCTGAGCGAAGTGGAATTCAAGCGCAAGGGCAAGGCTATCTTGGCAGAC
TACCTGGAGATGCAGGACGAGAGGGACGCAGTCGAGTCTATGGGTAACAT
GAAACTAGAGGACCCGGAGATAATAGGCAAGCTCGTAGGCATCTGGGTGG
ACGACATCCTTGCTCGCAGCGCGTGCAAGGAGGAACATCGCATCCACCTC
GCGGATTTGATGGTGATTCTACACAAGGCTGATCTTCTGCCCACACCTGC
AGCAGCTCAAGGCCTGAACAGCGCCTTGGAGTTCTTGGCGGACATAAAGG
TGGACATTCCCAAGGTGGAAGACTGGATGGCCAAGATCATCTGCCGGCTT
CTGGAGGGGGGTGTCCTGTCCCTTGCTTTCTTACAGGCCCTACCCCAGCA
AATGGTCCAGGACGGGGCAGCGGTGCCTTTCGCCCTCGCAGTGATGAGGG
AGGTCAAAGCGAGCATGGGGAATGCGAAAGCCAAGGAGATGTTGGAGGTG
GAAAAGCTAAATTTAGGTCTATTGGTAGGCCCCGATGGGGACGCAGCGGA
GGCGCAGCGTTTGGTCCATACCTGGTCTTTCTAA

Synonyms

Publications