jgi.p|Nanoce1779_2|577698, mRNA_560 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|577698
Unique Name	mRNA_560
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4506
Alignment location	scaffold_3:1357991..1363362 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	577784
Track	FilteredModels2
ProteinId	577698

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_3	supercontig	scaffold_3:1357991..1363362 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|577698	gene_560	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|577698	mRNA_560-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_560	CDS_560	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_3:1357991..1363362+
coding sequence from alignment at scaffold_3:1357991..1363362+

mRNA sequence

>mRNA_560 ID=mRNA_560|Name=jgi.p|Nanoce1779_2|577698|organism=Nannochloropsis oceanica|type=mRNA|length=4506bp
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAGCAGCAGCAACAGGGCAAGGCAGACGGCATTGAAGGCAAAG
AGTAAGGGACGTGGAAAGGGCTCCAACAGGGCATCTATCCAGCCGATGTT
GACTGCGGATGGTCCTATACTCCTACTTATTCTATGTTCACATACGTTTT
CCCCAGGGAGTTATCACATGCCGGTGAGACTCGCCCGGTGCATTACAAGT
TGTGGGAGTTGGTCCGCTACATCCTGCCCGCAGGGTGCTACGCTTTTGGG
GGACCCACGGTCCATCTGGCTGTCTTTCACAATTTGTTCGTGACCAAGCT
GCATTGGCTGAATGATCAAGAGTTTGTAGATCTCCTGGCCCTAGGTATGA
CTTTGCCTGGCCCTACAAGCTCCGAGTTCTGCGTTGCTGTTGGAACCTAC
CGCGCTGGAGTGCTAGGTGCCCTGGTGGCTTTTTTGTGCTTCACCTTGCC
CAGCTTTATTATAATGCTTCTCGCAGGCTTGGGTGCCACACATATGGATC
CAAATCACATCCCAGACTGGATGTCGGGTCTAGCTCCCGCAGCCACAGCC
CTCATCTTTGTGGCCTTTGCTAACCTAGGCAAGAAGATCGTGGGTGGCTC
ACCATTGAAGGCAAGCATTGTCCTAGGTTCGTCCTCTATCACGCTGCTGG
TTCAGAACGAGTCGAGAATACCCGCGAGGGCCATCATGTGGATCTTGCCG
CTCATGCTCTTGGTAGGGGGTAGCCTAACCCTGGGCGAGAAGGTCTTTAA
GGAGTACCGAGCCCGCAAGCAGCAAGCTGCAGCGGAGGCACGAGCCCTGT
CGGCGCCTGAGCAAGGCGAGGGTCGCATCACTGAAGCATCCACTACACAG
ACTGGCACCGCCGCCACTACCAATACGGAGGACGCTAGCAGCATGGGCTC
GACAGCGGTAACGTCCGACACGTACGATCGGGTACCCGTGTCCAAGTGGT
CGAGCATGGTCGCCTTCCTGCTCATCGTCGGCTTTCTCCTATACCTTCTG
GCGATGCACGTGGCAAAGCAGACCATGGGCGCGCTCATGCACATCTTCAG
CTCTTTCTTCATCGTGGGAATCACCATTTACGGGGGAGGGCAGGTGATGT
TGCCCCTGTTGGTGAGTGTGGCAGTAGACCCAGGTTGGCTGTCCATGGAC
CAATTCATGGTGGGCTTTGCGGTTATCCAGATGATGCCCGGTCCACTTTC
CAACCTGGCAGCTTACATTGGAGCCATCTACATGGGCGTGCCAGGGGCCG
TAGTGGGCGTGATTGGCTTTTTCCTCCCCGGAATCCTCTTGGTTATTGCC
TTGCTACCCCTCTGGGACAAAGTGCGCAAGGTTTCGAACGTCCGCCCTTT
CTTGGCGGGCGTCAATGCGATGGGCCTCGGCCTCATCCTCGCCGTGGGCA
TTGCCCTCTACCTCAAGATGGTACGGAATCCTGCGGCCGCCGTCGTAAAC
ATCATCACGGCTTGCCTGGTGGGGTATCTAGGCTATTCATCTCTGGTGGG
CGTGCTCGTGGGTGCTCTTGTGGGCTTCTTGCTAAGCCCCACGTGCCTTT
CTTGGGGTCAGGAACCTTACCTCCTGCCCAAAAGTTAAATCAAACTGAAG
AGCGACGGAATAGGGACTGGGGGACAATGATGAAAATAAGGATGAGCTGG
TGGGCCTCAAAGATAAGTTTGCTCCGGGCCTGTTGATAGTAACGATAGAT
AGTATAGCGTAAATTAGGGCAAAGATGGAAAGAAAAAAACTATTAAAGGG
AAGCCACCCTACCTGCCTGAGTCTGAGTCCGTGACTGTACAGTCTTACTT
GTCGTCTGGATTCCCAGGACTTTTCGGTCCATAGGTGAGGCAGGGATCGC
TACGAACCCTTACGGATCCGTTACTCCTCCTTGTAAAGAATTTTTTGGGG
TAAAGTTCAACGATAAATGCAATTCTCCAGACCCCCTGAGGTGGACGTTT
CCGCGATGCTCCCAGCGTAAACCCCCTACGTCTGGCATTTGACCCTGAAG
ATACCGTTGAGTGGGTCACAGAAGATCCGGGAGATCGCGGAGTGAAATCT
TTTCCTTAATATACATTAAGTGCCCCAGCACCAGAGATGCCAAGGATCAT
GTAGATCCTATCGGATTGGCTCTCGCTCAAAGCCAGCGTGTGCGTGGGCG
TTCTTGGAAGAGCTTTGACAAGCACTTATTATAAAAGGCTGTGTGATTAT
TTTACTTGGCTCTGTGAGGGCGCCTTGCTCAGCGCATAGTCACCTCCCTA
ATAAATATTTTGGCAAGTCCGAAAGTGATTATAAACAGCAAGGAAAAGGA
ATACTCGACAAGCGTCACTTATGAGAGGCCCGAATATGATGGCTCTTAAG
TTTTGAAATATCTATCTCTTCCTTTTTCTCTCATGCGCACCCAAGAGAAG
CTTAGATGTGCGGTCATTTGATCTGTTGCCATTGGCCTCTTTTTATTCCT
TTGAATGCTCAGATGATTCCCATTCTCAGAAATTCTTCGTGAACTTTTGA
ATTTACTATCATTAGCTATTAAGTCCTCGGATATAGACCGGGGTGACACA
TTGCTCTGATTGGAAAATGTTACTTTCGAGGAGGATGAGAACAGAGAGAA
TGTACTTTCACAGTCCTGTGAGCAGTGGTTTTGCGCGTCATATGTTACAG
AGTTGGATATATATGATGACATGCCGTCCGAAGTCCTACACCTTCTGCTC
CTCGGTGCCTGGTATCGATGCCTGGATATTCTGCACCTCAGCCTTCGAGT
CTTCCTGCTGATGTTTCGGGTGAAGCTGTTGCTCCTGTTGCTTCTTTTGT
ACCGTCTTCTGTTGCTGATGGATCTGGAAATTGGAAGGCGCCAAAGTTTG
AGCCAGGTAATACACTTGCGGTGATGGATGGTTGTTGGGGAGGAGAGGTA
CGGTGGCATAGGGAGACAAAATGTAGGGGCCGTCGTCGGTCATACAAAGG
TGTGACATGGATTGACTCAGAGTGGTCATATTCATGTGCTCGCTTGAGGG
GTAGCACAATAAATGGTTGGCCACAGAAAAGTACGGAGCCGCCGCTAGTT
GATACTGATGATCGTCACTGAAGGTAGCCTGGGAGGCGGATGGTTGTTGA
TGGATAAATTGTGGCTCTTGCGGATGATTCCAAGATTTAGATCCCCCTTG
TTGATGATGTAGTACATCCTCAGGCGTCAGAGGACTGGCACTCAAAGCAG
CGATAATGAGCTGATGGGCACGTCGGCAATAATCAGGCTTGCCAATTATA
ATAAGTATACGCTCGTTCGCAATAGCTCCTTCCTTGGCGCTTAAGCTCTG
ATCCAGAAGCAAGACCCGTGCTTTGGATTTTGAGCGAATTTTACTTATAA
TAACGCCTCCTTTCCCTAATAGCAAGCCCGCCTGCATTGAAGTCATAAAC
AGAAAGAAGGGGGACGGGGCGGGAGAGAAGGTATAAGCGGAAGGGAAAAT
ATGAATGAGTGAGCTTGGAAAATCGCGTTGCACAAGGGCACTTGATAAAG
TTAGACGTTATATAGTACGTGAAAAGAGACGAATGCCAGGACATGTTTTT
GAGAAATGATTTTGTGAGAAATACCTTGGAGGAGTCGATCACCATCTTGA
TACCCGGAGGGGATAGCTCAAACTTCTCGTGCGAGGAGGCAGCGATGATT
CCATCCTCACCCGAAGGGCTGGATTTACGTACTCTGGAGGCGCTAGTGGG
GCTAGTTGCTTCTTTTAAGTCAATACGGGTGGGAACTGAGGAGGACGTAG
GAGTACTAACGAGCGTTTTTAAGTGCTTTCGACTTTTATGGTGGGGGTGG
ATGTTGCTATAGCCTTCAAAAAGGCCTGCTTTTTGGGCAAGCAAGTCCAC
AGCCCAGCAGACGGACATTGCGGAGCCCATGACAACAACCATGCGATGCG
CGGAATCGCGCTTGTTATGCTCGAGGGAAGCAATGCTCACGTGTGCCCCT
GTAATATCGCAAATACTGCGAATCGCTTCCCCCCTACGACCAATTATTAT
ACCCATTCGGGTGCTGGGCAGCAGTAAACGGGCGTAAGTGTCCACGAGTG
GGAGTTGATGAGGCGCTTGCCCAGTGTGCTGGTACAGACCAGGACGCAAA
GAGCAAGTTGACAAGCTGGGCTCACCCTCGTAGTGGGACAAAGAGTCGTT
GGGTTGCGATGATAAGTCGGACGAGTCACAATCGTGGTCATCTTGGCAGC
CTTCATCGATGCTGGAGAATTCTTGGGTGACATGATGGATATGCTTTCGG
TCTCGTTGCTGATTTTGCGGTGCAGTCTCCATCTTATCAGGAAACGGCTG
CTTTTTTCGATTTGAAAAACCTAGTACTAAGGCTACTTCTACGGGGGAGG
GATATAAGCTCTCATTTAACAGCAATATAATTTTGTGGCATCACAATCGA
GGCGTTTTTAAGCCAGCCGATCCTTTCTAGGTGCAGAACCAGTGTCTTCT
GTGTCT

protein sequence of jgi.p|Nanoce1779_2|577698

>mRNA_560-protein ID=mRNA_560-protein|Name=jgi.p|Nanoce1779_2|577698|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MFTYVFPRELSHAGETRPVHYKLWELVRYILPAGCYAFGGPTVHLAVFHN
LFVTKLHWLNDQEFVDLLALGMTLPGPTSSEFCVAVGTYRAGVLGALVAF
LCFTLPSFIIMLLAGLGATHMDPNHIPDWMSGLAPAATALIFVAFANLGK
KIVGGSPLKASIVLGSSSITLLVQNESRIPARAIMWILPLMLLVGGSLTL
GEKVFKEYRARKQQAAAEARALSAPEQGEGRITEASTTQTGTAATTNTED
ASSMGSTAVTSDTYDRVPVSKWSSMVAFLLIVGFLLYLLAMHVAKQTMGA
LMHIFSSFFIVGITIYGGGQVMLPLLVSVAVDPGWLSMDQFMVGFAVIQM
MPGPLSNLAAYIGAIYMGVPGAVVGVIGFFLPGILLVIALLPLWDKVRKV
SNVRPFLAGVNAMGLGLILAVGIALYLKMVRNPAAAVVNIITACLVGYLG
YSSLVGVLVGALVGFLLSPTCLSWGQEPYLLPKS*

mRNA from alignment at scaffold_3:1357991..1363362+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_560 ID=mRNA_560|Name=jgi.p|Nanoce1779_2|577698|organism=Nannochloropsis oceanica|type=mRNA|length=5372bp|location=Sequence derived from alignment at scaffold_3:1357991..1363362+ (Nannochloropsis oceanica)
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAGCAGCAGCAACAGGGCAAGGCAGACGGCATTGAAGGCAAAG
AGTAAGGGACGTGGAAAGGGCTCCAACAGGGCATCTATCCAGCCGATGTT
GACTGCGGATGGTCCTATACTCCTACTTATTCTATGTTCACATACGTTTT
CCCCAGGGAGTTATCACATGCCGGTGAGACTCGCCCGGTGCATTACAAGT
TGTGGGAGTTGGTCCGCTACATCCTGCCCGCAGGGTGCTACGCTTTTGGG
GGACCCACGGTCCATCTGGCTGTCTTTCACAATTTGTTCGTGACCAAGCT
GCATTGGCTGAATGATCAAGTATGTATGCTTTGATGATCAATAAACACCG
AATCGCTAAAGGTGCTATCCTGAAATGCAAGAATCTCACTCTGTATCCTT
CTCCTTTTTTCACCTCCCTTTTCCGCTCTTAGGAGTTTGTAGATCTCCTG
GCCCTAGGTATGACTTTGCCTGGCCCTACAAGCTCCGAGTTCTGCGTTGC
TGGTAAGTTGTCAGAAGAGTTTAGGAGGCGCGTAAAAGAGAAGATGGAAG
GAGCCCTGGAAATTCCTTCACCCACGCAGCGCTTTCCACGAGACACATAT
TATTCAGCCTCCTCTCCCTCTCTAAAAAACAGTTGGAACCTACCGCGCTG
GAGTGCTAGGTGCCCTGGTGGCTTTTTTGTGCTTCACCTTGCCCAGCTTT
ATTATAATGCTTCTCGCAGGCTTGGGTGCCACACATATGGATCCAAATCA
CATCCCAGACTGGATGTCGGGTCTAGCTCCCGCAGCCACAGCCCTCATCT
TTGTGGCCTTTGCTAACCTAGGCAAGAAGATCGTGGGTGGCTCACCATTG
AAGGCAAGCATTGTCCTAGGTTCGTCCTCTATCACGCTGCTGGTTCAGAA
CGAGTCGAGAATACCCGCGAGGGCCATCATGTGGATCTTGCCGCTCATGC
TCTTGGTAGGGGGTAGCCTAACCCTGGGCGAGAAGGTCTTTAAGGAGTAC
CGAGCCCGCAAGCAGCAAGCTGCAGCGGAGGCACGAGCCCTGTCGGCGCC
TGAGCAAGGCGAGGGTCGCATCACTGAAGCATCCACTACACAGACTGGCA
CCGCCGCCACTACCAATACGGAGGACGCTAGCAGCATGGGCTCGACAGCG
GTAACGTCCGACACGTACGATCGGGTACCCGTGTCCAAGTGGTCGAGCAT
GGTCGCCTTCCTGCTCATCGTCGGCTTTCTCCTATACCTTCTGGCGATGC
ACGTGGCAAAGCAGACCATGGGCGCGCTCATGCACATCTTCAGCTCTTTC
TTCATCGTGGGAATCACCATTTACGGGGGAGGGCAGGTGATGTTGCCCCT
GTTGGTGAGTGTGGCAGTAGACCCAGGTTGGCTGTCCATGGACCAATTCA
TGGTGGGCTTTGCGGTTATCCAGATGATGCCCGGTCCACTTTCCAACCTG
GCAGCTTACATTGGAGCCATCTACATGGGCGTGCCAGGGGCCGTAGTGGG
CGTGATTGGCTTTTTCCTCCCCGGAATCCTCTTGGTTATTGCCTTGCTAC
CCCTCTGGGACAAAGTGCGCAAGGTTTCGAACGTCCGCCCTTTCTTGGCG
GGCGTCAATGCGATGGGCCTCGGCCTCATCCTCGCCGTGGGCATTGCCCT
CTACCTCAAGATGGTACGGAATCCTGCGGCCGCCGTCGTAAACATCATCA
CGGCTTGCCTGGTGGGGTATCTAGGCTATTCATCTCTGGTGGGCGTGCTC
GTGGGTGCTCTTGTGGGCTTCTTGCTAAGCCCCACGTGCCTTTCTTGGGG
TCAGGAACCTTACCTCCTGCCCAAAAGTTAAATCAAACTGAAGAGCGACG
GAATAGGGACTGGGGGACAATGATGAAAATAAGGATGAGCTGGTGGGCCT
CAAAGATAAGTTTGCTCCGGGCCTGTTGATAGTAACGATAGATAGTATAG
CGTAAATTAGGGCAAAGATGGAAAGAAAAAAACTATTAAAGGGAAGCCAC
CCTACCTGCCTGAGTCTGAGTCCGTGACTGTACAGTCTTACTTGTCGTCT
GGATTCCCAGGACTTTTCGGTCCATAGGTGAGGCAGGGATCGCTACGAAC
CCTTACGGATCCGTTACTCCTCCTTGTAAAGAATTTTTTGGGGTAAAGTT
CAACGATAAATGCAATTCTCCAGACCCCCTGAGGTGGACGTTTCCGCGAT
GCTCCCAGCGTAAACCCCCTACGTCTGGCATTTGACCCTGAAGATACCGT
TGAGTGGGTCACAGAAGATCCGGGAGATCGCGGAGTGAAATCTTTTCCTT
AATATACATTAAGTGCCCCAGCACCAGAGATGCCAAGGATCATGTAGATC
CTATCGGATTGGCTCTCGCTCAAAGCCAGCGTGTGCGTGGGCGTTCTTGG
AAGAGCTTTGACAAGCACTTATTATAAAAGGCTGTGTGATTATTTTACTT
GGCTCTGTGAGGGCGCCTTGCTCAGCGCATAGTCACCTCCCTAATAAATA
TTTTGGCAAGTCCGAAAGTGATTATAAACAGCAAGGAAAAGGAATACTCG
ACAAGCGTCACTTATGAGAGGCCCGAATATGATGGCTCTTAAGTTTTGAA
ATATCTATCTCTTCCTTTTTCTCTCATGCGCACCCAAGAGAAGCTTAGAT
GTGCGGTCATTTGATCTGTTGCCATTGGCCTCTTTTTATTCCTTTGAATG
CTCAGATGATTCCCATTCTCAGAAATTCTTCGTGAACTTTTGAATTTACT
ATCATTAGCTATTAAGTCCTCGGATATAGACCGGGGTGACACATTGCTCT
GATTGGAAAATGTTACTTTCGAGGAGGATGAGAACAGAGAGAATGTACTT
TCACAGTCCTGTGAGCAGTGGTTTTGCGCGTCATATGTTACAGAGTTGGA
TATATATGATGACATGCCGTCCGAAGTCCTACACCTTCTGCTCCTCGGTG
CCTGGTATCGATGCCTGGATATTCTGCACCTCAGCCTTCGAGTCTTCCTG
CTGATGTTTCGGGTGAAGCTGTTGCTCCTGTTGCTTCTTTTGTACCGTCT
TCTGTTGCTGATGGATCTGGAAATTGGAAGGCGCCAAAGTTTGAGCCAGG
TAATACACTTGCGGTGATGGATGGTTGTTGGGGAGGAGAGGTACGGTGGC
ATAGGGAGACAAAATGTAGGGGCCGTCGTCGGTCATACAAAGGTGTGACA
TGGATTGACTCAGAGTGGTCTGTTTATTTGGTCAGGTGAAGTTGTTGTGT
GAGTGCATCACTGATCGTAAATTTATAAAGATTGAGTCCATCTCCTTGCT
GGTTATAAGCGTGTGTGGATGGATCCGCCCCAAAATCATACGTACCATAT
TCATGTGCTCGCTTGAGGGGTAGCACAATAAATGGTTGGCCACAGAAAAG
TACGGAGCCGCCGCTAGTTGATACTGATGATCGTCACTGAAGGTAGCCTG
GGAGGCGGATGGTTGTTGATGGATAAATTGTGGCTCTTGCGGATGATTCC
AAGATTTAGATCCCCCTTGTTGATGATGTAGTACATCCTCAGGCGTCAGA
GGACTGGCACTCAAAGCAGCGATAATGAGCTGATGGGCACGTCGGCAATA
ATCAGGCTTGCCAATTATAATAAGTATACGCTCGTTCGCAATCTGTAAAT
ACGAGAATAGGCGGTTGAATGTCAGATTGAAAGATGGTATTGATCGAATA
TTTTATGCTTTTGCTTTGTGATTTTATGTCCCTCGTGACTTACAGCTCCT
TCCTTGGCGCTTAAGCTCTGATCCAGAAGCAAGACCCGTGCTTTGGATTT
TGAGCGAATTTTACTTATAATAACGCCTCCTTTCCCTAATAGCAAGCCCG
CCTGCATTGAAGTCATAAACAGAAAGAAGGGGGACGGGGCGGGAGAGAAG
GTATAAGCGGAAGGGAAAATATGAATGAGTGAGCTTGGAAAATCGCGTTG
CACAAGGGCACTTGATAAAGTTAGACGTTATATAGTACGTGAAAAGAGAC
GAATGCCAGGACATGTTTTTGAGAAATGATTTTGTGAGAAATACCTTGGA
GGAGTCGATCACCATCTTGATACCCGGAGGGGATAGCTCAAACTTCTCGT
GCGAGGAGGCAGCGATGATTCCATCCTCACCCGAAGGGCTGGATTTACGT
ACTCTGGAGGCGCTAGTGGGGCTAGTTGCTTCTTTTAAGTCAATACGGGT
GGGAACTGAGGAGGACGTAGGAGTACTAACGAGCGTTTTTAAGTGCTTTC
GACTGTGCGGTAAGGAATGAGATGGGATATAGCTTGGGCCAAAATTGCCT
CATTCCTAATCTTTGAGTGCTCATCTCACCTTTTATGGTGGGGGTGGATG
TTGCTATAGCCTTCAAAAAGGCCTGCTTTTTGGGCAAGCAAGTCCACAGC
CCAGCAGACGGACATTGCGGAGCCCATGACAACAACCTGTGCGTAAATGA
AAAGGAGAAATATGCATGATGAGTTTCAATCGACTGTCGATGCTGCATGG
ACAAAGGACCGAAGAGTAGGACGTACCATGCGATGCGCGGAATCGCGCTT
GTTATGCTCGAGGGAAGCAATGCTCACGTGTGCCCCTGTAATATCGCAAA
TACTGCGAATCGCTTCCCCCCTACGACCAATTATTATACCCATTCGGGTG
CTGGGCAGCAGTAAACGGGCGTAAGTGTCCACGAGTGGGAGTTGATGAGG
CGCTACACAGGCATTGTGGGATTATCACAAGGGAACAATGATGAGATGTT
GATGCAGAGAGTTGGGTGCACGTTGCAAGGATAGCCTTTGGAAAGCACTT
ATGCAAAACGTACCTTGCCCAGTGTGCTGGTACAGACCAGGACGCAAAGA
GCAAGTTGACAAGCTGGGCTCACTGTAGTGTGTGAGTGTGTGAGAGTACA
AGATCGGTGAGGACAAGCTGATTTTTGCTCCAAGGCCAAGATGCAGGGTC
GTTTGACCATGCCTTCAAAAATTTGGGTTGCTTCACTTACCCCTCGTAGT
GGGACAAAGAGTCGTTGGGTTGCGATGATAAGTCGGACGAGTCACAATCG
TGGTCATCTTGGCAGCCTTCATCGATGCTGGAGAATTCTTGGGTGACATG
ATGGATATGCTTTCGGTCTCGTTGCTGATTTTGCGGTGCAGTCTCCATCT
TATCAGGAAACGGCTGCTTTTTTCGATTTGAAAAACCTAGTACTAAGGCT
ACTTCTACGGGGGAGGGATATAAGCTCTCATTTAACAGCAATATAATTTT
GTGGCATCACAATCGAGGCGTTTTTAAGCCAGCCGATCCTTTCTAGGTGC
AGAACCAGTGTCTTCTGTGTCT

Coding sequence (CDS) from alignment at scaffold_3:1357991..1363362+

>mRNA_560 ID=mRNA_560|Name=jgi.p|Nanoce1779_2|577698|organism=Nannochloropsis oceanica|type=CDS|length=4365bp|location=Sequence derived from alignment at scaffold_3:1357991..1363362+ (Nannochloropsis oceanica)
ATGTTCACATACGTTTTCCCCAGGGAGTTATCACATGCCGGTGAGACTCG
CCCGGTGCATTACAAGTTGTGGGAGTTGGTCCGCTACATCCTGCCCGCAG
GGTGCTACGCTTTTGGGGGACCCACGGTCCATCTGGCTGTCTTTCACAAT
TTGTTCGTGACCAAGCTGCATTGGCTGAATGATCAAGAGTTTGTAGATCT
CCTGGCCCTAGGTATGACTTTGCCTGGCCCTACAAGCTCCGAGTTCTGCG
TTGCTGTTGGAACCTACCGCGCTGGAGTGCTAGGTGCCCTGGTGGCTTTT
TTGTGCTTCACCTTGCCCAGCTTTATTATAATGCTTCTCGCAGGCTTGGG
TGCCACACATATGGATCCAAATCACATCCCAGACTGGATGTCGGGTCTAG
CTCCCGCAGCCACAGCCCTCATCTTTGTGGCCTTTGCTAACCTAGGCAAG
AAGATCGTGGGTGGCTCACCATTGAAGGCAAGCATTGTCCTAGGTTCGTC
CTCTATCACGCTGCTGGTTCAGAACGAGTCGAGAATACCCGCGAGGGCCA
TCATGTGGATCTTGCCGCTCATGCTCTTGGTAGGGGGTAGCCTAACCCTG
GGCGAGAAGGTCTTTAAGGAGTACCGAGCCCGCAAGCAGCAAGCTGCAGC
GGAGGCACGAGCCCTGTCGGCGCCTGAGCAAGGCGAGGGTCGCATCACTG
AAGCATCCACTACACAGACTGGCACCGCCGCCACTACCAATACGGAGGAC
GCTAGCAGCATGGGCTCGACAGCGGTAACGTCCGACACGTACGATCGGGT
ACCCGTGTCCAAGTGGTCGAGCATGGTCGCCTTCCTGCTCATCGTCGGCT
TTCTCCTATACCTTCTGGCGATGCACGTGGCAAAGCAGACCATGGGCGCG
CTCATGCACATCTTCAGCTCTTTCTTCATCGTGGGAATCACCATTTACGG
GGGAGGGCAGGTGATGTTGCCCCTGTTGGTGAGTGTGGCAGTAGACCCAG
GTTGGCTGTCCATGGACCAATTCATGGTGGGCTTTGCGGTTATCCAGATG
ATGCCCGGTCCACTTTCCAACCTGGCAGCTTACATTGGAGCCATCTACAT
GGGCGTGCCAGGGGCCGTAGTGGGCGTGATTGGCTTTTTCCTCCCCGGAA
TCCTCTTGGTTATTGCCTTGCTACCCCTCTGGGACAAAGTGCGCAAGGTT
TCGAACGTCCGCCCTTTCTTGGCGGGCGTCAATGCGATGGGCCTCGGCCT
CATCCTCGCCGTGGGCATTGCCCTCTACCTCAAGATGGTACGGAATCCTG
CGGCCGCCGTCGTAAACATCATCACGGCTTGCCTGGTGGGGTATCTAGGC
TATTCATCTCTGGTGGGCGTGCTCGTGGGTGCTCTTGTGGGCTTCTTGCT
AAGCCCCACGTGCCTTTCTTGGGGTCAGGAACCTTACCTCCTGCCCAAAA
GTTAAATGTTCACATACGTTTTCCCCAGGGAGTTATCACATGCCGGTGAG
ACTCGCCCGGTGCATTACAAGTTGTGGGAGTTGGTCCGCTACATCCTGCC
CGCAGGGTGCTACGCTTTTGGGGGACCCACGGTCCATCTGGCTGTCTTTC
ACAATTTGTTCGTGACCAAGCTGCATTGGCTGAATGATCAAGAGTTTGTA
GATCTCCTGGCCCTAGGTATGACTTTGCCTGGCCCTACAAGCTCCGAGTT
CTGCGTTGCTGTTGGAACCTACCGCGCTGGAGTGCTAGGTGCCCTGGTGG
CTTTTTTGTGCTTCACCTTGCCCAGCTTTATTATAATGCTTCTCGCAGGC
TTGGGTGCCACACATATGGATCCAAATCACATCCCAGACTGGATGTCGGG
TCTAGCTCCCGCAGCCACAGCCCTCATCTTTGTGGCCTTTGCTAACCTAG
GCAAGAAGATCGTGGGTGGCTCACCATTGAAGGCAAGCATTGTCCTAGGT
TCGTCCTCTATCACGCTGCTGGTTCAGAACGAGTCGAGAATACCCGCGAG
GGCCATCATGTGGATCTTGCCGCTCATGCTCTTGGTAGGGGGTAGCCTAA
CCCTGGGCGAGAAGGTCTTTAAGGAGTACCGAGCCCGCAAGCAGCAAGCT
GCAGCGGAGGCACGAGCCCTGTCGGCGCCTGAGCAAGGCGAGGGTCGCAT
CACTGAAGCATCCACTACACAGACTGGCACCGCCGCCACTACCAATACGG
AGGACGCTAGCAGCATGGGCTCGACAGCGGTAACGTCCGACACGTACGAT
CGGGTACCCGTGTCCAAGTGGTCGAGCATGGTCGCCTTCCTGCTCATCGT
CGGCTTTCTCCTATACCTTCTGGCGATGCACGTGGCAAAGCAGACCATGG
GCGCGCTCATGCACATCTTCAGCTCTTTCTTCATCGTGGGAATCACCATT
TACGGGGGAGGGCAGGTGATGTTGCCCCTGTTGGTGAGTGTGGCAGTAGA
CCCAGGTTGGCTGTCCATGGACCAATTCATGGTGGGCTTTGCGGTTATCC
AGATGATGCCCGGTCCACTTTCCAACCTGGCAGCTTACATTGGAGCCATC
TACATGGGCGTGCCAGGGGCCGTAGTGGGCGTGATTGGCTTTTTCCTCCC
CGGAATCCTCTTGGTTATTGCCTTGCTACCCCTCTGGGACAAAGTGCGCA
AGGTTTCGAACGTCCGCCCTTTCTTGGCGGGCGTCAATGCGATGGGCCTC
GGCCTCATCCTCGCCGTGGGCATTGCCCTCTACCTCAAGATGGTACGGAA
TCCTGCGGCCGCCGTCGTAAACATCATCACGGCTTGCCTGGTGGGGTATC
TAGGCTATTCATCTCTGGTGGGCGTGCTCGTGGGTGCTCTTGTGGGCTTC
TTGCTAAGCCCCACGTGCCTTTCTTGGGGTCAGGAACCTTACCTCCTGCC
CAAAAGTTAAATGTTCACATACGTTTTCCCCAGGGAGTTATCACATGCCG
GTGAGACTCGCCCGGTGCATTACAAGTTGTGGGAGTTGGTCCGCTACATC
CTGCCCGCAGGGTGCTACGCTTTTGGGGGACCCACGGTCCATCTGGCTGT
CTTTCACAATTTGTTCGTGACCAAGCTGCATTGGCTGAATGATCAAGAGT
TTGTAGATCTCCTGGCCCTAGGTATGACTTTGCCTGGCCCTACAAGCTCC
GAGTTCTGCGTTGCTGTTGGAACCTACCGCGCTGGAGTGCTAGGTGCCCT
GGTGGCTTTTTTGTGCTTCACCTTGCCCAGCTTTATTATAATGCTTCTCG
CAGGCTTGGGTGCCACACATATGGATCCAAATCACATCCCAGACTGGATG
TCGGGTCTAGCTCCCGCAGCCACAGCCCTCATCTTTGTGGCCTTTGCTAA
CCTAGGCAAGAAGATCGTGGGTGGCTCACCATTGAAGGCAAGCATTGTCC
TAGGTTCGTCCTCTATCACGCTGCTGGTTCAGAACGAGTCGAGAATACCC
GCGAGGGCCATCATGTGGATCTTGCCGCTCATGCTCTTGGTAGGGGGTAG
CCTAACCCTGGGCGAGAAGGTCTTTAAGGAGTACCGAGCCCGCAAGCAGC
AAGCTGCAGCGGAGGCACGAGCCCTGTCGGCGCCTGAGCAAGGCGAGGGT
CGCATCACTGAAGCATCCACTACACAGACTGGCACCGCCGCCACTACCAA
TACGGAGGACGCTAGCAGCATGGGCTCGACAGCGGTAACGTCCGACACGT
ACGATCGGGTACCCGTGTCCAAGTGGTCGAGCATGGTCGCCTTCCTGCTC
ATCGTCGGCTTTCTCCTATACCTTCTGGCGATGCACGTGGCAAAGCAGAC
CATGGGCGCGCTCATGCACATCTTCAGCTCTTTCTTCATCGTGGGAATCA
CCATTTACGGGGGAGGGCAGGTGATGTTGCCCCTGTTGGTGAGTGTGGCA
GTAGACCCAGGTTGGCTGTCCATGGACCAATTCATGGTGGGCTTTGCGGT
TATCCAGATGATGCCCGGTCCACTTTCCAACCTGGCAGCTTACATTGGAG
CCATCTACATGGGCGTGCCAGGGGCCGTAGTGGGCGTGATTGGCTTTTTC
CTCCCCGGAATCCTCTTGGTTATTGCCTTGCTACCCCTCTGGGACAAAGT
GCGCAAGGTTTCGAACGTCCGCCCTTTCTTGGCGGGCGTCAATGCGATGG
GCCTCGGCCTCATCCTCGCCGTGGGCATTGCCCTCTACCTCAAGATGGTA
CGGAATCCTGCGGCCGCCGTCGTAAACATCATCACGGCTTGCCTGGTGGG
GTATCTAGGCTATTCATCTCTGGTGGGCGTGCTCGTGGGTGCTCTTGTGG
GCTTCTTGCTAAGCCCCACGTGCCTTTCTTGGGGTCAGGAACCTTACCTC
CTGCCCAAAAGTTAA

Synonyms

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